RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 WASHC2CQ9Y4E1 1318 aa30.11■■■□□ 2.41
SMN2-215ENST00000628696 DISP3Q9P2K9 1392 aa30.11■■■□□ 2.41
SMN2-215ENST00000628696 A2ML1A8K2U0 1454 aa30.11■■■□□ 2.41
SMN2-215ENST00000628696 TCOF1Q13428 1488 aaKnown RBP30.1■■■□□ 2.41
SMN2-215ENST00000628696 VPS8Q8N3P4 1428 aa30.09■■■□□ 2.41
SMN2-215ENST00000628696 TNRQ92752 1358 aa30.08■■■□□ 2.41
SMN2-215ENST00000628696 DNMT1P26358 1616 aaKnown RBP30.07■■■□□ 2.4
SMN2-215ENST00000628696 ARHGEF5Q12774 1597 aa30.07■■■□□ 2.4
SMN2-215ENST00000628696 KDM5DQ9BY66 1539 aa30.07■■■□□ 2.4
SMN2-215ENST00000628696 LRRC9Q6ZRR7 1453 aa30.07■■■□□ 2.4
SMN2-215ENST00000628696 PZPP20742 1482 aa30.04■■■□□ 2.4
SMN2-215ENST00000628696 UBAP1LF5GYI3 381 aa30.02■■■□□ 2.4
SMN2-215ENST00000628696 FAM135AQ9P2D6 1515 aa30.01■■■□□ 2.4
SMN2-215ENST00000628696 KANK4Q5T7N3 995 aaPredicted RBP30.01■■■□□ 2.39
SMN2-215ENST00000628696 POLR1AO95602 1720 aaPredicted RBP29.96■■■□□ 2.39
SMN2-215ENST00000628696 MIA2Q96PC5 1412 aa29.96■■■□□ 2.39
SMN2-215ENST00000628696 ILDR2Q71H61 639 aa29.95■■■□□ 2.39
SMN2-215ENST00000628696 ANKLE2Q86XL3 938 aa29.93■■■□□ 2.38
SMN2-215ENST00000628696 THEMISQ8N1K5 641 aaPredicted RBP29.93■■■□□ 2.38
SMN2-215ENST00000628696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.92■■■□□ 2.38
SMN2-215ENST00000628696 MAST1Q9Y2H9 1570 aa29.92■■■□□ 2.38
SMN2-215ENST00000628696 MAP3K1Q13233 1512 aa29.91■■■□□ 2.38
SMN2-215ENST00000628696 SPATA31D1Q6ZQQ2 1576 aa29.9■■■□□ 2.38
SMN2-215ENST00000628696 MYOM3Q5VTT5 1437 aa29.9■■■□□ 2.38
SMN2-215ENST00000628696 NEURL4Q96JN8 1562 aa29.9■■■□□ 2.38
SMN2-215ENST00000628696 RNF17Q9BXT8 1623 aaKnown RBP29.89■■■□□ 2.38
SMN2-215ENST00000628696 NLRP1Q9C000 1473 aa29.89■■■□□ 2.38
SMN2-215ENST00000628696 UGGT1Q9NYU2 1555 aa29.88■■■□□ 2.37
SMN2-215ENST00000628696 CFAP65Q6ZU64 1925 aaKnown RBP29.87■■■□□ 2.37
SMN2-215ENST00000628696 ABCC3O15438 1527 aa29.86■■■□□ 2.37
SMN2-215ENST00000628696 EIF2AK4Q9P2K8 1649 aaKnown RBP29.84■■■□□ 2.37
SMN2-215ENST00000628696 ZC3H13Q5T200 1668 aaKnown RBP29.84■■■□□ 2.37
SMN2-215ENST00000628696 SHANK2Q9UPX8 1470 aa29.83■■■□□ 2.37
SMN2-215ENST00000628696 SCAF1Q9H7N4 1312 aaKnown RBP29.83■■■□□ 2.37
SMN2-215ENST00000628696 APLP2Q06481 763 aa29.83■■■□□ 2.37
SMN2-215ENST00000628696 CPS1P31327 1500 aa29.81■■■□□ 2.36
SMN2-215ENST00000628696 CEP152O94986 1710 aa29.8■■■□□ 2.36
SMN2-215ENST00000628696 NPHP4O75161 1426 aaPredicted RBP29.79■■■□□ 2.36
SMN2-215ENST00000628696 PIP4K2BP78356 416 aa29.79■■■□□ 2.36
SMN2-215ENST00000628696 DUOX2Q9NRD8 1548 aa29.79■■■□□ 2.36
SMN2-215ENST00000628696 MROH1Q8NDA8 1641 aa29.78■■■□□ 2.36
SMN2-215ENST00000628696 ERVK-7P63135 1459 aa29.77■■■□□ 2.36
SMN2-215ENST00000628696 SOCS7O14512 581 aa29.77■■■□□ 2.36
SMN2-215ENST00000628696 DEPDC5O75140 1603 aa29.77■■■□□ 2.36
SMN2-215ENST00000628696 TOM1O60784 492 aa29.76■■■□□ 2.35
SMN2-215ENST00000628696 RRP7BPQ9NSQ0 103 aa29.76■■■□□ 2.35
SMN2-215ENST00000628696 MED14O60244 1454 aa29.75■■■□□ 2.35
SMN2-215ENST00000628696 VWDEQ8N2E2 1590 aa29.74■■■□□ 2.35
SMN2-215ENST00000628696 KIF15Q9NS87 1388 aa29.74■■■□□ 2.35
SMN2-215ENST00000628696 IQGAP1P46940 1657 aa29.73■■■□□ 2.35
SMN2-215ENST00000628696 PTPN23Q9H3S7 1636 aa29.73■■■□□ 2.35
SMN2-215ENST00000628696 ABCC5O15440 1437 aa29.72■■■□□ 2.35
SMN2-215ENST00000628696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.71■■■□□ 2.35
SMN2-215ENST00000628696 CROCC2H7BZ55 1655 aa29.7■■■□□ 2.35
SMN2-215ENST00000628696 HSPA1LP34931 641 aa29.7■■■□□ 2.35
SMN2-215ENST00000628696 UBR1Q8IWV7 1749 aa29.66■■■□□ 2.34
SMN2-215ENST00000628696 ERBINQ96RT1 1412 aa29.66■■■□□ 2.34
SMN2-215ENST00000628696 DAPK1P53355 1430 aa29.65■■■□□ 2.34
SMN2-215ENST00000628696 CHIC2Q9UKJ5 165 aa29.64■■■□□ 2.34
SMN2-215ENST00000628696 PRDM15P57071 1507 aaPredicted RBP29.63■■■□□ 2.33
SMN2-215ENST00000628696 FGD6Q6ZV73 1430 aa29.62■■■□□ 2.33
SMN2-215ENST00000628696 STRCP1A6NGW2 1772 aa29.62■■■□□ 2.33
SMN2-215ENST00000628696 TXNDC2Q86VQ3 553 aa29.61■■■□□ 2.33
SMN2-215ENST00000628696 ARHGAP31Q2M1Z3 1444 aa29.61■■■□□ 2.33
SMN2-215ENST00000628696 KANK1Q14678 1352 aa29.6■■■□□ 2.33
SMN2-215ENST00000628696 SCAF11Q99590 1463 aaKnown RBP29.59■■■□□ 2.33
SMN2-215ENST00000628696 LTKP29376 864 aa29.58■■■□□ 2.33
SMN2-215ENST00000628696 ANKRD30AQ9BXX3 1397 aa29.57■■■□□ 2.32
SMN2-215ENST00000628696 LRRC7Q96NW7 1537 aa29.56■■■□□ 2.32
SMN2-215ENST00000628696 STAG3Q9UJ98 1225 aa29.56■■■□□ 2.32
SMN2-215ENST00000628696 EID1Q9Y6B2 187 aa29.55■■■□□ 2.32
SMN2-215ENST00000628696 SENP3Q9H4L4 574 aaPredicted RBP29.54■■■□□ 2.32
SMN2-215ENST00000628696 ARHGAP23Q9P227 1491 aa29.53■■■□□ 2.32
SMN2-215ENST00000628696 PIK3C2BO00750 1634 aa29.53■■■□□ 2.32
SMN2-215ENST00000628696 ALKQ9UM73 1620 aa29.53■■■□□ 2.32
SMN2-215ENST00000628696 SLIT1O75093 1534 aa29.52■■■□□ 2.32
SMN2-215ENST00000628696 SYNMO15061 1565 aa29.51■■■□□ 2.31
SMN2-215ENST00000628696 MED1Q15648 1581 aaPredicted RBP29.49■■■□□ 2.31
SMN2-215ENST00000628696 FAM50AQ14320 339 aaKnown RBP29.48■■■□□ 2.31
SMN2-215ENST00000628696 IDI1Q13907 227 aa29.47■■■□□ 2.31
SMN2-215ENST00000628696 TMEM2Q9UHN6 1383 aa29.46■■■□□ 2.31
SMN2-215ENST00000628696 LMTK2Q8IWU2 1503 aa29.45■■■□□ 2.3
SMN2-215ENST00000628696 EFCAB6Q5THR3 1501 aa29.42■■■□□ 2.3
SMN2-215ENST00000628696 PHF23Q9BUL5 403 aaPredicted RBP29.39■■■□□ 2.3
SMN2-215ENST00000628696 ADGRL2O95490 1459 aa29.38■■■□□ 2.29
SMN2-215ENST00000628696 KDM5AP29375 1690 aaKnown RBP29.37■■■□□ 2.29
SMN2-215ENST00000628696 XIRP1Q702N8 1843 aaKnown RBP29.37■■■□□ 2.29
SMN2-215ENST00000628696 NOS1P29475 1434 aa29.36■■■□□ 2.29
SMN2-215ENST00000628696 SLC26A8Q96RN1 970 aa29.35■■■□□ 2.29
SMN2-215ENST00000628696 BCANQ96GW7 911 aa29.34■■■□□ 2.29
SMN2-215ENST00000628696 ANKRD50Q9ULJ7 1429 aa29.34■■■□□ 2.29
SMN2-215ENST00000628696 SLC52A1Q9NWF4 448 aa29.33■■■□□ 2.29
SMN2-215ENST00000628696 ADGRB3O60242 1522 aa29.3■■■□□ 2.28
SMN2-215ENST00000628696 KCNA6P17658 529 aa29.3■■■□□ 2.28
SMN2-215ENST00000628696 PROSER2Q86WR7 435 aaPredicted RBP29.29■■■□□ 2.28
SMN2-215ENST00000628696 TMEM94Q12767 1356 aa29.28■■■□□ 2.28
SMN2-215ENST00000628696 TET3O43151 1660 aa29.28■■■□□ 2.28
SMN2-215ENST00000628696 RBM33Q96EV2 1170 aaKnown RBP29.27■■■□□ 2.28
SMN2-215ENST00000628696 RPRD2Q5VT52 1461 aaKnown RBP29.25■■■□□ 2.27
SMN2-215ENST00000628696 MYO5BQ9ULV0 1848 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms