RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 MYO3AQ8NEV4 1616 aa25.71■■□□□ 1.71
LINC00628-201ENST00000628516 KDM5DQ9BY66 1539 aa25.7■■□□□ 1.7
LINC00628-201ENST00000628516 CEP170BQ9Y4F5 1589 aaPredicted RBP25.68■■□□□ 1.7
LINC00628-201ENST00000628516 FAM135AQ9P2D6 1515 aa25.68■■□□□ 1.7
LINC00628-201ENST00000628516 ZNF142P52746 1687 aaPredicted RBP25.67■■□□□ 1.7
LINC00628-201ENST00000628516 FBXO31Q5XUX0 539 aaPredicted RBP25.66■■□□□ 1.7
LINC00628-201ENST00000628516 NCKAP5LQ9HCH0 1330 aa25.65■■□□□ 1.7
LINC00628-201ENST00000628516 PZPP20742 1482 aa25.64■■□□□ 1.69
LINC00628-201ENST00000628516 PTPN23Q9H3S7 1636 aa25.63■■□□□ 1.69
LINC00628-201ENST00000628516 TNRQ92752 1358 aa25.62■■□□□ 1.69
LINC00628-201ENST00000628516 A2ML1A8K2U0 1454 aa25.61■■□□□ 1.69
LINC00628-201ENST00000628516 PLA2R1Q13018 1463 aa25.61■■□□□ 1.69
LINC00628-201ENST00000628516 ABCC5O15440 1437 aa25.61■■□□□ 1.69
LINC00628-201ENST00000628516 PKD2Q13563 968 aa25.6■■□□□ 1.69
LINC00628-201ENST00000628516 FGD6Q6ZV73 1430 aa25.6■■□□□ 1.69
LINC00628-201ENST00000628516 RNF17Q9BXT8 1623 aaKnown RBP25.59■■□□□ 1.69
LINC00628-201ENST00000628516 EIF2AK4Q9P2K8 1649 aaKnown RBP25.59■■□□□ 1.69
LINC00628-201ENST00000628516 DUOX2Q9NRD8 1548 aa25.58■■□□□ 1.69
LINC00628-201ENST00000628516 SHANK2Q9UPX8 1470 aa25.58■■□□□ 1.69
LINC00628-201ENST00000628516 KIF15Q9NS87 1388 aa25.56■■□□□ 1.68
LINC00628-201ENST00000628516 DNMT1P26358 1616 aaKnown RBP25.56■■□□□ 1.68
LINC00628-201ENST00000628516 DAPK1P53355 1430 aa25.56■■□□□ 1.68
LINC00628-201ENST00000628516 TCOF1Q13428 1488 aaKnown RBP25.56■■□□□ 1.68
LINC00628-201ENST00000628516 RRP7BPQ9NSQ0 103 aa25.56■■□□□ 1.68
LINC00628-201ENST00000628516 ABCC3O15438 1527 aa25.55■■□□□ 1.68
LINC00628-201ENST00000628516 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
LINC00628-201ENST00000628516 LTBP4Q8N2S1 1624 aa25.53■■□□□ 1.68
LINC00628-201ENST00000628516 ZC3H13Q5T200 1668 aaKnown RBP25.52■■□□□ 1.68
LINC00628-201ENST00000628516 CHIC2Q9UKJ5 165 aa25.51■■□□□ 1.67
LINC00628-201ENST00000628516 MROH1Q8NDA8 1641 aa25.51■■□□□ 1.67
LINC00628-201ENST00000628516 ERBINQ96RT1 1412 aa25.5■■□□□ 1.67
LINC00628-201ENST00000628516 NLRP1Q9C000 1473 aa25.49■■□□□ 1.67
LINC00628-201ENST00000628516 ZNF335Q9H4Z2 1342 aaPredicted RBP25.48■■□□□ 1.67
LINC00628-201ENST00000628516 THEMISQ8N1K5 641 aaPredicted RBP25.47■■□□□ 1.67
LINC00628-201ENST00000628516 CEP152O94986 1710 aa25.46■■□□□ 1.67
LINC00628-201ENST00000628516 ANKRD30AQ9BXX3 1397 aa25.46■■□□□ 1.67
LINC00628-201ENST00000628516 FAM50AQ14320 339 aaKnown RBP25.46■■□□□ 1.67
LINC00628-201ENST00000628516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.46■■□□□ 1.67
LINC00628-201ENST00000628516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.45■■□□□ 1.67
LINC00628-201ENST00000628516 UGGT1Q9NYU2 1555 aa25.45■■□□□ 1.66
LINC00628-201ENST00000628516 SPATA31D1Q6ZQQ2 1576 aa25.44■■□□□ 1.66
LINC00628-201ENST00000628516 ERVK-7P63135 1459 aa25.44■■□□□ 1.66
LINC00628-201ENST00000628516 ANKLE2Q86XL3 938 aa25.43■■□□□ 1.66
LINC00628-201ENST00000628516 PRDM15P57071 1507 aaPredicted RBP25.42■■□□□ 1.66
LINC00628-201ENST00000628516 IQSEC2Q5JU85 1478 aa25.41■■□□□ 1.66
LINC00628-201ENST00000628516 POLR1AO95602 1720 aaPredicted RBP25.4■■□□□ 1.66
LINC00628-201ENST00000628516 KANK1Q14678 1352 aa25.4■■□□□ 1.66
LINC00628-201ENST00000628516 CFAP65Q6ZU64 1925 aaKnown RBP25.39■■□□□ 1.65
LINC00628-201ENST00000628516 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.65
LINC00628-201ENST00000628516 DEPDC5O75140 1603 aa25.37■■□□□ 1.65
LINC00628-201ENST00000628516 ARHGAP31Q2M1Z3 1444 aa25.37■■□□□ 1.65
LINC00628-201ENST00000628516 ADGRL2O95490 1459 aa25.35■■□□□ 1.65
LINC00628-201ENST00000628516 NPHP4O75161 1426 aaPredicted RBP25.32■■□□□ 1.64
LINC00628-201ENST00000628516 MED14O60244 1454 aa25.3■■□□□ 1.64
LINC00628-201ENST00000628516 UBAP1LF5GYI3 381 aa25.29■■□□□ 1.64
LINC00628-201ENST00000628516 DISP3Q9P2K9 1392 aa25.28■■□□□ 1.64
LINC00628-201ENST00000628516 ANKRD50Q9ULJ7 1429 aa25.28■■□□□ 1.64
LINC00628-201ENST00000628516 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
LINC00628-201ENST00000628516 VWDEQ8N2E2 1590 aa25.27■■□□□ 1.64
LINC00628-201ENST00000628516 UBR1Q8IWV7 1749 aa25.27■■□□□ 1.64
LINC00628-201ENST00000628516 PPARGC1BQ86YN6 1023 aaKnown RBP25.27■■□□□ 1.64
LINC00628-201ENST00000628516 CPS1P31327 1500 aa25.25■■□□□ 1.63
LINC00628-201ENST00000628516 IQGAP1P46940 1657 aa25.25■■□□□ 1.63
LINC00628-201ENST00000628516 STAG3Q9UJ98 1225 aa25.23■■□□□ 1.63
LINC00628-201ENST00000628516 TXNDC2Q86VQ3 553 aa25.22■■□□□ 1.63
LINC00628-201ENST00000628516 SCAF11Q99590 1463 aaKnown RBP25.21■■□□□ 1.63
LINC00628-201ENST00000628516 LTKP29376 864 aa25.2■■□□□ 1.62
LINC00628-201ENST00000628516 IDI1Q13907 227 aa25.2■■□□□ 1.62
LINC00628-201ENST00000628516 EFCAB6Q5THR3 1501 aa25.2■■□□□ 1.62
LINC00628-201ENST00000628516 PIK3C2BO00750 1634 aa25.19■■□□□ 1.62
LINC00628-201ENST00000628516 SLIT1O75093 1534 aa25.19■■□□□ 1.62
LINC00628-201ENST00000628516 ILDR2Q71H61 639 aa25.19■■□□□ 1.62
LINC00628-201ENST00000628516 EID1Q9Y6B2 187 aa25.19■■□□□ 1.62
LINC00628-201ENST00000628516 ARHGAP23Q9P227 1491 aa25.19■■□□□ 1.62
LINC00628-201ENST00000628516 ITGAEP38570 1179 aa25.18■■□□□ 1.62
LINC00628-201ENST00000628516 NOS1P29475 1434 aa25.17■■□□□ 1.62
LINC00628-201ENST00000628516 ROCK1Q13464 1354 aa25.16■■□□□ 1.62
LINC00628-201ENST00000628516 TMEM2Q9UHN6 1383 aa25.16■■□□□ 1.62
LINC00628-201ENST00000628516 SYNMO15061 1565 aa25.15■■□□□ 1.62
LINC00628-201ENST00000628516 TOM1O60784 492 aa25.13■■□□□ 1.61
LINC00628-201ENST00000628516 SLC52A1Q9NWF4 448 aa25.13■■□□□ 1.61
LINC00628-201ENST00000628516 SCAF1Q9H7N4 1312 aaKnown RBP25.12■■□□□ 1.61
LINC00628-201ENST00000628516 RPRD2Q5VT52 1461 aaKnown RBP25.12■■□□□ 1.61
LINC00628-201ENST00000628516 SOCS7O14512 581 aa25.11■■□□□ 1.61
LINC00628-201ENST00000628516 PIP4K2BP78356 416 aa25.1■■□□□ 1.61
LINC00628-201ENST00000628516 TET3O43151 1660 aa25.1■■□□□ 1.61
LINC00628-201ENST00000628516 KDM5AP29375 1690 aaKnown RBP25.1■■□□□ 1.61
LINC00628-201ENST00000628516 UNC13BO14795 1591 aa25.1■■□□□ 1.61
LINC00628-201ENST00000628516 STRCP1A6NGW2 1772 aa25.08■■□□□ 1.61
LINC00628-201ENST00000628516 ADGRB3O60242 1522 aa25.07■■□□□ 1.6
LINC00628-201ENST00000628516 LRRC7Q96NW7 1537 aa25.07■■□□□ 1.6
LINC00628-201ENST00000628516 GCC2Q8IWJ2 1684 aa25.04■■□□□ 1.6
LINC00628-201ENST00000628516 NUP155O75694 1391 aa25.03■■□□□ 1.6
LINC00628-201ENST00000628516 HSPA1LP34931 641 aa25■■□□□ 1.59
LINC00628-201ENST00000628516 IQGAP3Q86VI3 1631 aa25■■□□□ 1.59
LINC00628-201ENST00000628516 BCANQ96GW7 911 aa24.99■■□□□ 1.59
LINC00628-201ENST00000628516 SLC26A8Q96RN1 970 aa24.99■■□□□ 1.59
LINC00628-201ENST00000628516 E9PCH4 1651 aa24.98■■□□□ 1.59
LINC00628-201ENST00000628516 RRBP1Q9P2E9 1410 aaKnown RBP24.98■■□□□ 1.59
LINC00628-201ENST00000628516 CHGAP10645 457 aaKnown RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms