RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 NISCHQ9Y2I1 1504 aa40.69■■■■■ 4.1
LINC00628-201ENST00000628516 CCDC180Q9P1Z9 1646 aa36.37■■■■□ 3.41
LINC00628-201ENST00000628516 ABCC9O60706 1549 aa36.21■■■■□ 3.39
LINC00628-201ENST00000628516 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
LINC00628-201ENST00000628516 NACADO15069 1562 aa34.36■■■■□ 3.09
LINC00628-201ENST00000628516 DCAF8L2P0C7V8 631 aa34.35■■■■□ 3.09
LINC00628-201ENST00000628516 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
LINC00628-201ENST00000628516 PABPN1Q86U42 306 aaKnown RBP eCLIP33.78■■■■□ 3
LINC00628-201ENST00000628516 ZCCHC6Q5VYS8 1495 aaKnown RBP33.77■■■■□ 3
LINC00628-201ENST00000628516 DNAJC5BQ9UF47 199 aa33.74■■■□□ 2.99
LINC00628-201ENST00000628516 UNC13AQ9UPW8 1703 aa33.71■■■□□ 2.99
LINC00628-201ENST00000628516 DCAF1Q9Y4B6 1507 aa33.6■■■□□ 2.97
LINC00628-201ENST00000628516 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
LINC00628-201ENST00000628516 SCRIBQ14160 1630 aa33.2■■■□□ 2.91
LINC00628-201ENST00000628516 SHROOM4Q9ULL8 1493 aa33.06■■■□□ 2.88
LINC00628-201ENST00000628516 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
LINC00628-201ENST00000628516 EIF4G1Q04637 1599 aaKnown RBP32.68■■■□□ 2.82
LINC00628-201ENST00000628516 CECR2Q9BXF3 1484 aa32.58■■■□□ 2.81
LINC00628-201ENST00000628516 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
LINC00628-201ENST00000628516 SMARCA4P51532 1647 aa31.68■■■□□ 2.66
LINC00628-201ENST00000628516 ATAD2BQ9ULI0 1458 aa31.67■■■□□ 2.66
LINC00628-201ENST00000628516 SMARCA2P51531 1590 aa31.59■■■□□ 2.65
LINC00628-201ENST00000628516 BAZ1AQ9NRL2 1556 aaPredicted RBP31.57■■■□□ 2.64
LINC00628-201ENST00000628516 HMGXB3Q12766 1538 aa31.49■■■□□ 2.63
LINC00628-201ENST00000628516 BAZ1BQ9UIG0 1483 aaKnown RBP31.39■■■□□ 2.62
LINC00628-201ENST00000628516 MROH2BQ7Z745 1585 aa31.36■■■□□ 2.61
LINC00628-201ENST00000628516 PEG3Q9GZU2 1588 aa31.35■■■□□ 2.61
LINC00628-201ENST00000628516 ERCC6Q03468 1493 aa31.26■■■□□ 2.59
LINC00628-201ENST00000628516 DNAJC5Q9H3Z4 198 aa31.17■■■□□ 2.58
LINC00628-201ENST00000628516 NESP48681 1621 aa31.16■■■□□ 2.58
LINC00628-201ENST00000628516 CUX2O14529 1486 aa31.08■■■□□ 2.57
LINC00628-201ENST00000628516 WIZO95785 1651 aa30.99■■■□□ 2.55
LINC00628-201ENST00000628516 LAMC3Q9Y6N6 1575 aa30.96■■■□□ 2.55
LINC00628-201ENST00000628516 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
LINC00628-201ENST00000628516 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
LINC00628-201ENST00000628516 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
LINC00628-201ENST00000628516 THOC2Q8NI27 1593 aaKnown RBP30.76■■■□□ 2.52
LINC00628-201ENST00000628516 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
LINC00628-201ENST00000628516 TOP2AP11388 1531 aaKnown RBP30.62■■■□□ 2.49
LINC00628-201ENST00000628516 MRC2Q9UBG0 1479 aa30.51■■■□□ 2.48
LINC00628-201ENST00000628516 CFTRP13569 1480 aa30.47■■■□□ 2.47
LINC00628-201ENST00000628516 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
LINC00628-201ENST00000628516 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
LINC00628-201ENST00000628516 WDR62O43379 1518 aa30.41■■■□□ 2.46
LINC00628-201ENST00000628516 CCDC88BA6NC98 1476 aa30.29■■■□□ 2.44
LINC00628-201ENST00000628516 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
LINC00628-201ENST00000628516 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
LINC00628-201ENST00000628516 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
LINC00628-201ENST00000628516 ABCC8Q09428 1581 aa29.83■■■□□ 2.37
LINC00628-201ENST00000628516 IFT140Q96RY7 1462 aa29.83■■■□□ 2.37
LINC00628-201ENST00000628516 DNMBPQ6XZF7 1577 aa29.78■■■□□ 2.36
LINC00628-201ENST00000628516 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.35
LINC00628-201ENST00000628516 OSCARQ8IYS5 282 aa29.75■■■□□ 2.35
LINC00628-201ENST00000628516 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
LINC00628-201ENST00000628516 TRIM41Q8WV44 630 aa29.67■■■□□ 2.34
LINC00628-201ENST00000628516 POLA1P09884 1462 aaPredicted RBP29.59■■■□□ 2.33
LINC00628-201ENST00000628516 EIF4G3O43432 1585 aaKnown RBP29.58■■■□□ 2.33
LINC00628-201ENST00000628516 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
LINC00628-201ENST00000628516 AQRO60306 1485 aaKnown RBP eCLIP29.54■■■□□ 2.32
LINC00628-201ENST00000628516 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
LINC00628-201ENST00000628516 SOGA1O94964 1423 aa29.49■■■□□ 2.31
LINC00628-201ENST00000628516 FGD5Q6ZNL6 1462 aa29.45■■■□□ 2.31
LINC00628-201ENST00000628516 CUX1P39880 1505 aa29.45■■■□□ 2.3
LINC00628-201ENST00000628516 TDRD9Q8NDG6 1382 aaKnown RBP29.4■■■□□ 2.3
LINC00628-201ENST00000628516 FBLN2P98095 1184 aa29.35■■■□□ 2.29
LINC00628-201ENST00000628516 CHD1O14646 1710 aa29.31■■■□□ 2.28
LINC00628-201ENST00000628516 WDR97A6NE52 1622 aa29.28■■■□□ 2.28
LINC00628-201ENST00000628516 RIMBP3CA6NJZ7 1639 aa29.28■■■□□ 2.28
LINC00628-201ENST00000628516 RIMBP3BA6NNM3 1639 aa29.28■■■□□ 2.28
LINC00628-201ENST00000628516 RIMBP3Q9UFD9 1639 aa29.28■■■□□ 2.28
LINC00628-201ENST00000628516 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
LINC00628-201ENST00000628516 ARHGEF11O15085 1522 aa29.23■■■□□ 2.27
LINC00628-201ENST00000628516 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
LINC00628-201ENST00000628516 MAGI1Q96QZ7 1491 aaPredicted RBP29.16■■■□□ 2.26
LINC00628-201ENST00000628516 CHMP7Q8WUX9 453 aaPredicted RBP29.15■■■□□ 2.26
LINC00628-201ENST00000628516 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
LINC00628-201ENST00000628516 ABCA10Q8WWZ4 1543 aa29.12■■■□□ 2.25
LINC00628-201ENST00000628516 WRNQ14191 1432 aaPredicted RBP eCLIP29.08■■■□□ 2.25
LINC00628-201ENST00000628516 CYB5RLQ6IPT4 315 aa29.06■■■□□ 2.24
LINC00628-201ENST00000628516 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
LINC00628-201ENST00000628516 SYNJ2O15056 1496 aa29.05■■■□□ 2.24
LINC00628-201ENST00000628516 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
LINC00628-201ENST00000628516 ABCA5Q8WWZ7 1642 aa29.03■■■□□ 2.24
LINC00628-201ENST00000628516 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
LINC00628-201ENST00000628516 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
LINC00628-201ENST00000628516 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
LINC00628-201ENST00000628516 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
LINC00628-201ENST00000628516 ADAMTS12P58397 1594 aa28.8■■■□□ 2.2
LINC00628-201ENST00000628516 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
LINC00628-201ENST00000628516 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
LINC00628-201ENST00000628516 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
LINC00628-201ENST00000628516 NUP160Q12769 1436 aa28.69■■■□□ 2.18
LINC00628-201ENST00000628516 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
LINC00628-201ENST00000628516 TRHP20396 242 aaPredicted RBP28.67■■■□□ 2.18
LINC00628-201ENST00000628516 ERCC6L2Q5T890 1561 aa28.57■■■□□ 2.16
LINC00628-201ENST00000628516 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
LINC00628-201ENST00000628516 SHROOM2Q13796 1616 aa28.51■■■□□ 2.15
LINC00628-201ENST00000628516 IGF1RP08069 1367 aa28.48■■■□□ 2.15
LINC00628-201ENST00000628516 JPH4Q96JJ6 628 aa28.45■■■□□ 2.14
LINC00628-201ENST00000628516 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms