RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 KIF3BO15066 747 aa12.7□□□□□ -0.38
SPTAN1-213ENST00000627809 FBXO31Q5XUX0 539 aaPredicted RBP12.7□□□□□ -0.38
SPTAN1-213ENST00000627809 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
SPTAN1-213ENST00000627809 SHANK2Q9UPX8 1470 aa12.7□□□□□ -0.38
SPTAN1-213ENST00000627809 CEP170BQ9Y4F5 1589 aaPredicted RBP12.69□□□□□ -0.38
SPTAN1-213ENST00000627809 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
SPTAN1-213ENST00000627809 PRDM15P57071 1507 aaPredicted RBP12.67□□□□□ -0.38
SPTAN1-213ENST00000627809 DUOX2Q9NRD8 1548 aa12.67□□□□□ -0.38
SPTAN1-213ENST00000627809 KIF15Q9NS87 1388 aa12.67□□□□□ -0.38
SPTAN1-213ENST00000627809 UHRF1BP1Q6BDS2 1440 aa12.66□□□□□ -0.38
SPTAN1-213ENST00000627809 CNTLNQ9NXG0 1405 aa12.66□□□□□ -0.38
SPTAN1-213ENST00000627809 RRP7BPQ9NSQ0 103 aa12.66□□□□□ -0.38
SPTAN1-213ENST00000627809 MYO5BQ9ULV0 1848 aa12.66□□□□□ -0.38
SPTAN1-213ENST00000627809 ZC3H13Q5T200 1668 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-213ENST00000627809 NEURL4Q96JN8 1562 aa12.65□□□□□ -0.38
SPTAN1-213ENST00000627809 ADGRL2O95490 1459 aa12.65□□□□□ -0.38
SPTAN1-213ENST00000627809 VWDEQ8N2E2 1590 aa12.64□□□□□ -0.39
SPTAN1-213ENST00000627809 POLR1AO95602 1720 aaPredicted RBP12.64□□□□□ -0.39
SPTAN1-213ENST00000627809 PZPP20742 1482 aa12.64□□□□□ -0.39
SPTAN1-213ENST00000627809 NPATQ14207 1427 aa12.63□□□□□ -0.39
SPTAN1-213ENST00000627809 NCOA1Q15788 1441 aa12.63□□□□□ -0.39
SPTAN1-213ENST00000627809 FAM50AQ14320 339 aaKnown RBP12.63□□□□□ -0.39
SPTAN1-213ENST00000627809 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
SPTAN1-213ENST00000627809 SYNMO15061 1565 aa12.62□□□□□ -0.39
SPTAN1-213ENST00000627809 SPATA31D1Q6ZQQ2 1576 aa12.62□□□□□ -0.39
SPTAN1-213ENST00000627809 APLP2Q06481 763 aa12.62□□□□□ -0.39
SPTAN1-213ENST00000627809 UBR1Q8IWV7 1749 aa12.62□□□□□ -0.39
SPTAN1-213ENST00000627809 STRCP1A6NGW2 1772 aa12.61□□□□□ -0.39
SPTAN1-213ENST00000627809 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
SPTAN1-213ENST00000627809 PIK3C2BO00750 1634 aa12.6□□□□□ -0.39
SPTAN1-213ENST00000627809 TSPY4P0CV99 314 aa12.6□□□□□ -0.39
SPTAN1-213ENST00000627809 TSPY10P0CW01 314 aa12.6□□□□□ -0.39
SPTAN1-213ENST00000627809 NCKAP5LQ9HCH0 1330 aa12.6□□□□□ -0.39
SPTAN1-213ENST00000627809 LTBP4Q8N2S1 1624 aa12.59□□□□□ -0.39
SPTAN1-213ENST00000627809 ERBINQ96RT1 1412 aa12.59□□□□□ -0.39
SPTAN1-213ENST00000627809 UNC13BO14795 1591 aa12.59□□□□□ -0.39
SPTAN1-213ENST00000627809 UGGT1Q9NYU2 1555 aa12.59□□□□□ -0.39
SPTAN1-213ENST00000627809 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
SPTAN1-213ENST00000627809 E9PCH4 1651 aa12.58□□□□□ -0.4
SPTAN1-213ENST00000627809 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
SPTAN1-213ENST00000627809 FAM135AQ9P2D6 1515 aa12.57□□□□□ -0.4
SPTAN1-213ENST00000627809 TNRQ92752 1358 aa12.57□□□□□ -0.4
SPTAN1-213ENST00000627809 RSPH4AQ5TD94 716 aa12.57□□□□□ -0.4
SPTAN1-213ENST00000627809 ESF1Q9H501 851 aaKnown RBP12.57□□□□□ -0.4
SPTAN1-213ENST00000627809 WASHC2CQ9Y4E1 1318 aa12.57□□□□□ -0.4
SPTAN1-213ENST00000627809 ITGAEP38570 1179 aa12.56□□□□□ -0.4
SPTAN1-213ENST00000627809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.56□□□□□ -0.42e-19■■■□□ 16.2
SPTAN1-213ENST00000627809 GCC2Q8IWJ2 1684 aa12.55□□□□□ -0.4
SPTAN1-213ENST00000627809 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
SPTAN1-213ENST00000627809 LMTK2Q8IWU2 1503 aa12.54□□□□□ -0.4
SPTAN1-213ENST00000627809 TET3O43151 1660 aa12.54□□□□□ -0.4
SPTAN1-213ENST00000627809 ANKRD30AQ9BXX3 1397 aa12.53□□□□□ -0.4
SPTAN1-213ENST00000627809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPTAN1-213ENST00000627809 ANKRD50Q9ULJ7 1429 aa12.53□□□□□ -0.4
SPTAN1-213ENST00000627809 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.4
SPTAN1-213ENST00000627809 PLA2R1Q13018 1463 aa12.52□□□□□ -0.41
SPTAN1-213ENST00000627809 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
SPTAN1-213ENST00000627809 ZNF335Q9H4Z2 1342 aaPredicted RBP12.51□□□□□ -0.41
SPTAN1-213ENST00000627809 IQGAP1P46940 1657 aa12.51□□□□□ -0.41
SPTAN1-213ENST00000627809 PTPRTO14522 1441 aa12.5□□□□□ -0.41
SPTAN1-213ENST00000627809 ARHGAP31Q2M1Z3 1444 aa12.49□□□□□ -0.41
SPTAN1-213ENST00000627809 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
SPTAN1-213ENST00000627809 ALKQ9UM73 1620 aa12.48□□□□□ -0.41
SPTAN1-213ENST00000627809 NLRP1Q9C000 1473 aa12.48□□□□□ -0.41
SPTAN1-213ENST00000627809 NOS1P29475 1434 aa12.48□□□□□ -0.41
SPTAN1-213ENST00000627809 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
SPTAN1-213ENST00000627809 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.41
SPTAN1-213ENST00000627809 NAIPQ13075 1403 aa12.46□□□□□ -0.41
SPTAN1-213ENST00000627809 ROCK1Q13464 1354 aa12.46□□□□□ -0.41
SPTAN1-213ENST00000627809 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.41
SPTAN1-213ENST00000627809 TMEM131LA2VDJ0 1609 aa12.46□□□□□ -0.41
SPTAN1-213ENST00000627809 ADGRB3O60242 1522 aa12.46□□□□□ -0.42
SPTAN1-213ENST00000627809 CERKQ8TCT0 537 aa12.45□□□□□ -0.42
SPTAN1-213ENST00000627809 SLIT1O75093 1534 aa12.44□□□□□ -0.42
SPTAN1-213ENST00000627809 LTKP29376 864 aa12.44□□□□□ -0.42
SPTAN1-213ENST00000627809 CLTCL1P53675 1640 aa12.44□□□□□ -0.42
SPTAN1-213ENST00000627809 KDM5AP29375 1690 aaKnown RBP12.43□□□□□ -0.42
SPTAN1-213ENST00000627809 MED14O60244 1454 aa12.42□□□□□ -0.42
SPTAN1-213ENST00000627809 IDI1Q13907 227 aa12.42□□□□□ -0.42
SPTAN1-213ENST00000627809 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
SPTAN1-213ENST00000627809 FBXO41Q8TF61 875 aa12.4□□□□□ -0.42
SPTAN1-213ENST00000627809 SCAF11Q99590 1463 aaKnown RBP12.4□□□□□ -0.43
SPTAN1-213ENST00000627809 NRXN3Q9Y4C0 1643 aa12.39□□□□□ -0.43
SPTAN1-213ENST00000627809 KANK1Q14678 1352 aa12.39□□□□□ -0.43
SPTAN1-213ENST00000627809 ZFYVE9O95405 1425 aa12.38□□□□□ -0.43
SPTAN1-213ENST00000627809 NUP155O75694 1391 aa12.38□□□□□ -0.43
SPTAN1-213ENST00000627809 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
SPTAN1-213ENST00000627809 RPRD2Q5VT52 1461 aaKnown RBP12.36□□□□□ -0.43
SPTAN1-213ENST00000627809 TMEM2Q9UHN6 1383 aa12.36□□□□□ -0.43
SPTAN1-213ENST00000627809 PKD2Q13563 968 aa12.36□□□□□ -0.43
SPTAN1-213ENST00000627809 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
SPTAN1-213ENST00000627809 CHD2O14647 1828 aaKnown RBP12.34□□□□□ -0.43
SPTAN1-213ENST00000627809 LRRC7Q96NW7 1537 aa12.34□□□□□ -0.43
SPTAN1-213ENST00000627809 FOXD1Q16676 465 aa12.34□□□□□ -0.43
SPTAN1-213ENST00000627809 RBM33Q96EV2 1170 aaKnown RBP12.34□□□□□ -0.43
SPTAN1-213ENST00000627809 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
SPTAN1-213ENST00000627809 THEMISQ8N1K5 641 aaPredicted RBP12.33□□□□□ -0.44
SPTAN1-213ENST00000627809 KIF1BO60333 1816 aa12.32□□□□□ -0.44
SPTAN1-213ENST00000627809 TRPM2O94759 1503 aa12.32□□□□□ -0.44
SPTAN1-213ENST00000627809 ANKLE2Q86XL3 938 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms