RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 NISCHQ9Y2I1 1504 aa20.26■□□□□ 0.83
SPTAN1-213ENST00000627809 CCDC180Q9P1Z9 1646 aa18.06■□□□□ 0.48
SPTAN1-213ENST00000627809 ABCC9O60706 1549 aa17.89■□□□□ 0.45
SPTAN1-213ENST00000627809 RB1CC1Q8TDY2 1594 aa16.99■□□□□ 0.31
SPTAN1-213ENST00000627809 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.31
SPTAN1-213ENST00000627809 NACADO15069 1562 aa16.92■□□□□ 0.3
SPTAN1-213ENST00000627809 DCAF8L2P0C7V8 631 aa16.88■□□□□ 0.29
SPTAN1-213ENST00000627809 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
SPTAN1-213ENST00000627809 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
SPTAN1-213ENST00000627809 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
SPTAN1-213ENST00000627809 PABPN1Q86U42 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
SPTAN1-213ENST00000627809 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
SPTAN1-213ENST00000627809 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
SPTAN1-213ENST00000627809 SCRIBQ14160 1630 aa16.61■□□□□ 0.25
SPTAN1-213ENST00000627809 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
SPTAN1-213ENST00000627809 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
SPTAN1-213ENST00000627809 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
SPTAN1-213ENST00000627809 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
SPTAN1-213ENST00000627809 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
SPTAN1-213ENST00000627809 MROH2BQ7Z745 1585 aa15.72■□□□□ 0.11
SPTAN1-213ENST00000627809 ATAD2BQ9ULI0 1458 aa15.69■□□□□ 0.1
SPTAN1-213ENST00000627809 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
SPTAN1-213ENST00000627809 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
SPTAN1-213ENST00000627809 WIZO95785 1651 aa15.6■□□□□ 0.09
SPTAN1-213ENST00000627809 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.09
SPTAN1-213ENST00000627809 HMGXB3Q12766 1538 aa15.58■□□□□ 0.08
SPTAN1-213ENST00000627809 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
SPTAN1-213ENST00000627809 NESP48681 1621 aa15.53■□□□□ 0.08
SPTAN1-213ENST00000627809 BAZ1BQ9UIG0 1483 aaKnown RBP15.51■□□□□ 0.07
SPTAN1-213ENST00000627809 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
SPTAN1-213ENST00000627809 KIF21AQ7Z4S6 1674 aa15.38■□□□□ 0.05
SPTAN1-213ENST00000627809 THOC2Q8NI27 1593 aaKnown RBP15.3■□□□□ 0.04
SPTAN1-213ENST00000627809 TOP2AP11388 1531 aaKnown RBP15.27■□□□□ 0.03
SPTAN1-213ENST00000627809 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
SPTAN1-213ENST00000627809 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
SPTAN1-213ENST00000627809 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
SPTAN1-213ENST00000627809 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
SPTAN1-213ENST00000627809 CUX2O14529 1486 aa15.12■□□□□ 0.01
SPTAN1-213ENST00000627809 PRDM2Q13029 1718 aa15.12■□□□□ 0.01
SPTAN1-213ENST00000627809 CFTRP13569 1480 aa15.08■□□□□ 0
SPTAN1-213ENST00000627809 FANCD2Q9BXW9 1451 aa15.04■□□□□ -0
SPTAN1-213ENST00000627809 WDR62O43379 1518 aa15.03■□□□□ -0
SPTAN1-213ENST00000627809 PDS5BQ9NTI5 1447 aa15.03■□□□□ -0
SPTAN1-213ENST00000627809 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
SPTAN1-213ENST00000627809 URB2Q14146 1524 aaKnown RBP15.02□□□□□ -0.01
SPTAN1-213ENST00000627809 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
SPTAN1-213ENST00000627809 SUPT5HO00267 1087 aaKnown RBP14.86□□□□□ -0.03
SPTAN1-213ENST00000627809 TOPBP1Q92547 1522 aa14.83□□□□□ -0.04
SPTAN1-213ENST00000627809 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
SPTAN1-213ENST00000627809 ZNF608Q9ULD9 1512 aaPredicted RBP14.81□□□□□ -0.04
SPTAN1-213ENST00000627809 DNMBPQ6XZF7 1577 aa14.78□□□□□ -0.04
SPTAN1-213ENST00000627809 TARBP1Q13395 1621 aaKnown RBP14.75□□□□□ -0.05
SPTAN1-213ENST00000627809 CUX1P39880 1505 aa14.75□□□□□ -0.05
SPTAN1-213ENST00000627809 EIF4G3O43432 1585 aaKnown RBP14.73□□□□□ -0.05
SPTAN1-213ENST00000627809 POLA1P09884 1462 aaPredicted RBP14.7□□□□□ -0.06
SPTAN1-213ENST00000627809 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
SPTAN1-213ENST00000627809 WDR97A6NE52 1622 aa14.67□□□□□ -0.06
SPTAN1-213ENST00000627809 ABCC8Q09428 1581 aa14.66□□□□□ -0.06
SPTAN1-213ENST00000627809 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
SPTAN1-213ENST00000627809 IFT140Q96RY7 1462 aa14.64□□□□□ -0.07
SPTAN1-213ENST00000627809 CHD1O14646 1710 aa14.64□□□□□ -0.07
SPTAN1-213ENST00000627809 AQRO60306 1485 aaKnown RBP eCLIP14.63□□□□□ -0.07
SPTAN1-213ENST00000627809 SYNJ1O43426 1573 aa14.63□□□□□ -0.07
SPTAN1-213ENST00000627809 TDRD9Q8NDG6 1382 aaKnown RBP14.56□□□□□ -0.08
SPTAN1-213ENST00000627809 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
SPTAN1-213ENST00000627809 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
SPTAN1-213ENST00000627809 SOGA1O94964 1423 aa14.53□□□□□ -0.08
SPTAN1-213ENST00000627809 TOP2BQ02880 1626 aa14.51□□□□□ -0.09
SPTAN1-213ENST00000627809 ABCA5Q8WWZ7 1642 aa14.51□□□□□ -0.09
SPTAN1-213ENST00000627809 SNAPC4Q5SXM2 1469 aa14.49□□□□□ -0.09
SPTAN1-213ENST00000627809 RIMBP3CA6NJZ7 1639 aa14.47□□□□□ -0.09
SPTAN1-213ENST00000627809 RIMBP3BA6NNM3 1639 aa14.47□□□□□ -0.09
SPTAN1-213ENST00000627809 RIMBP3Q9UFD9 1639 aa14.47□□□□□ -0.09
SPTAN1-213ENST00000627809 WRNQ14191 1432 aaPredicted RBP eCLIP14.44□□□□□ -0.1
SPTAN1-213ENST00000627809 ABCA10Q8WWZ4 1543 aa14.43□□□□□ -0.1
SPTAN1-213ENST00000627809 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
SPTAN1-213ENST00000627809 GAPVD1Q14C86 1478 aa14.38□□□□□ -0.11
SPTAN1-213ENST00000627809 ARHGEF11O15085 1522 aa14.38□□□□□ -0.11
SPTAN1-213ENST00000627809 CLASP1Q7Z460 1538 aa14.37□□□□□ -0.11
SPTAN1-213ENST00000627809 ADAMTS12P58397 1594 aa14.37□□□□□ -0.11
SPTAN1-213ENST00000627809 GRIN2BQ13224 1484 aa14.37□□□□□ -0.11
SPTAN1-213ENST00000627809 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
SPTAN1-213ENST00000627809 FBLN2P98095 1184 aa14.34□□□□□ -0.11
SPTAN1-213ENST00000627809 MAGI1Q96QZ7 1491 aaPredicted RBP14.33□□□□□ -0.12
SPTAN1-213ENST00000627809 ERCC6L2Q5T890 1561 aa14.33□□□□□ -0.12
SPTAN1-213ENST00000627809 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
SPTAN1-213ENST00000627809 SYNJ2O15056 1496 aa14.31□□□□□ -0.12
SPTAN1-213ENST00000627809 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
SPTAN1-213ENST00000627809 GRIN2AQ12879 1464 aa14.25□□□□□ -0.13
SPTAN1-213ENST00000627809 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
SPTAN1-213ENST00000627809 RUSC2Q8N2Y8 1516 aa14.22□□□□□ -0.13
SPTAN1-213ENST00000627809 CHMP7Q8WUX9 453 aaPredicted RBP14.2□□□□□ -0.14
SPTAN1-213ENST00000627809 NUP160Q12769 1436 aa14.19□□□□□ -0.14
SPTAN1-213ENST00000627809 SHROOM2Q13796 1616 aa14.19□□□□□ -0.14
SPTAN1-213ENST00000627809 FHAD1B1AJZ9 1412 aa14.16□□□□□ -0.14
SPTAN1-213ENST00000627809 CYB5RLQ6IPT4 315 aa14.15□□□□□ -0.14
SPTAN1-213ENST00000627809 IGF1RP08069 1367 aa14.13□□□□□ -0.15
SPTAN1-213ENST00000627809 CUL7Q14999 1698 aa14.1□□□□□ -0.15
SPTAN1-213ENST00000627809 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
SPTAN1-213ENST00000627809 PRG4Q92954 1404 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms