RNA–Protein interactions for RNA: ENST00000619559.4

LCK-214, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-214ENST00000619559 ARAP3Q8WWN8 1544 aa29.3■■■□□ 2.28
LCK-214ENST00000619559 CCDC184Q52MB2 194 aa29.29■■■□□ 2.28
LCK-214ENST00000619559 TRPM1Q7Z4N2 1603 aa29.29■■■□□ 2.28
LCK-214ENST00000619559 CARD11Q9BXL7 1154 aa29.29■■■□□ 2.28
LCK-214ENST00000619559 DHX29Q7Z478 1369 aaKnown RBP29.28■■■□□ 2.28
LCK-214ENST00000619559 ROCK2O75116 1388 aaKnown RBP29.27■■■□□ 2.28
LCK-214ENST00000619559 DCAF11Q8TEB1 546 aa29.27■■■□□ 2.28
LCK-214ENST00000619559 PLA2R1Q13018 1463 aa29.27■■■□□ 2.28
LCK-214ENST00000619559 MRS2Q9HD23 443 aa29.25■■■□□ 2.27
LCK-214ENST00000619559 KDM2AQ9Y2K7 1162 aa29.25■■■□□ 2.27
LCK-214ENST00000619559 ATP10AO60312 1499 aa29.22■■■□□ 2.27
LCK-214ENST00000619559 PRAG1Q86YV5 1406 aa29.22■■■□□ 2.27
LCK-214ENST00000619559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.21■■■□□ 2.27
LCK-214ENST00000619559 TRAPPC8Q9Y2L5 1435 aa29.2■■■□□ 2.27
LCK-214ENST00000619559 LAMC1P11047 1609 aa29.2■■■□□ 2.27
LCK-214ENST00000619559 BCANQ96GW7 911 aa29.19■■■□□ 2.26
LCK-214ENST00000619559 A2MP01023 1474 aa29.18■■■□□ 2.26
LCK-214ENST00000619559 E9PCH4 1651 aa29.17■■■□□ 2.26
LCK-214ENST00000619559 RTEL1-TNFRSF6BF6WH68 1400 aa29.17■■■□□ 2.26
LCK-214ENST00000619559 POLR3GLQ9BT43 218 aa29.16■■■□□ 2.26
LCK-214ENST00000619559 WDR7Q9Y4E6 1490 aa29.15■■■□□ 2.26
LCK-214ENST00000619559 EIF2AK4Q9P2K8 1649 aaKnown RBP29.15■■■□□ 2.26
LCK-214ENST00000619559 FAM9BQ8IZU0 186 aa29.14■■■□□ 2.26
LCK-214ENST00000619559 ABCA9Q8IUA7 1624 aa29.14■■■□□ 2.26
LCK-214ENST00000619559 ZFYVE16Q7Z3T8 1539 aa29.14■■■□□ 2.26
LCK-214ENST00000619559 ST20-MTHFSA0A0A6YYL1 179 aa29.13■■■□□ 2.25
LCK-214ENST00000619559 GPRASP1Q5JY77 1395 aa29.12■■■□□ 2.25
LCK-214ENST00000619559 ZBED9Q6R2W3 1325 aa29.11■■■□□ 2.25
LCK-214ENST00000619559 SPAG9O60271 1321 aaKnown RBP29.1■■■□□ 2.25
LCK-214ENST00000619559 DEPDC5O75140 1603 aa29.09■■■□□ 2.25
LCK-214ENST00000619559 PRDM15P57071 1507 aaPredicted RBP29.08■■■□□ 2.25
LCK-214ENST00000619559 INO80Q9ULG1 1556 aaPredicted RBP29.06■■■□□ 2.24
LCK-214ENST00000619559 RGL3Q3MIN7 710 aa29.06■■■□□ 2.24
LCK-214ENST00000619559 TSHZ2Q9NRE2 1034 aa29.06■■■□□ 2.24
LCK-214ENST00000619559 FANCAO15360 1455 aa29.03■■■□□ 2.24
LCK-214ENST00000619559 ATP7AQ04656 1500 aa29.03■■■□□ 2.24
LCK-214ENST00000619559 RNF17Q9BXT8 1623 aaKnown RBP29.02■■■□□ 2.24
LCK-214ENST00000619559 KTN1Q86UP2 1357 aaKnown RBP29.02■■■□□ 2.24
LCK-214ENST00000619559 SPHKAPQ2M3C7 1700 aa29.02■■■□□ 2.24
LCK-214ENST00000619559 CEP152O94986 1710 aa29.01■■■□□ 2.23
LCK-214ENST00000619559 TET3O43151 1660 aa29■■■□□ 2.23
LCK-214ENST00000619559 TRPM2O94759 1503 aa29■■■□□ 2.23
LCK-214ENST00000619559 AFAP1Q8N556 730 aa28.99■■■□□ 2.23
LCK-214ENST00000619559 NBPF1Q3BBV0 1214 aa28.98■■■□□ 2.23
LCK-214ENST00000619559 COL17A1Q9UMD9 1497 aaPredicted RBP28.96■■■□□ 2.23
LCK-214ENST00000619559 VWDEQ8N2E2 1590 aa28.95■■■□□ 2.23
LCK-214ENST00000619559 ERICH6BQ5W0A0 696 aa28.94■■■□□ 2.22
LCK-214ENST00000619559 PTPRTO14522 1441 aa28.93■■■□□ 2.22
LCK-214ENST00000619559 MADDQ8WXG6 1647 aa28.93■■■□□ 2.22
LCK-214ENST00000619559 ADGRL1O94910 1474 aa28.93■■■□□ 2.22
LCK-214ENST00000619559 ASXL2Q76L83 1435 aa28.92■■■□□ 2.22
LCK-214ENST00000619559 RALBP1Q15311 655 aa28.92■■■□□ 2.22
LCK-214ENST00000619559 CLTCL1P53675 1640 aa28.91■■■□□ 2.22
LCK-214ENST00000619559 CNGB1Q14028 1251 aaPredicted RBP28.9■■■□□ 2.22
LCK-214ENST00000619559 BRD4O60885 1362 aaPredicted RBP28.9■■■□□ 2.22
LCK-214ENST00000619559 MYBBP1AQ9BQG0 1328 aaKnown RBP28.9■■■□□ 2.22
LCK-214ENST00000619559 SCAPERQ9BY12 1400 aa28.89■■■□□ 2.22
LCK-214ENST00000619559 KANK1Q14678 1352 aa28.89■■■□□ 2.21
LCK-214ENST00000619559 PNISRQ8TF01 805 aaKnown RBP28.87■■■□□ 2.21
LCK-214ENST00000619559 IQGAP1P46940 1657 aa28.87■■■□□ 2.21
LCK-214ENST00000619559 TMC1Q8TDI8 760 aa28.87■■■□□ 2.21
LCK-214ENST00000619559 TESK2Q96S53 571 aa28.86■■■□□ 2.21
LCK-214ENST00000619559 SMG6Q86US8 1419 aaKnown RBP28.85■■■□□ 2.21
LCK-214ENST00000619559 MROH1Q8NDA8 1641 aa28.85■■■□□ 2.21
LCK-214ENST00000619559 STAC3Q96MF2 364 aa28.84■■■□□ 2.21
LCK-214ENST00000619559 NEURL4Q96JN8 1562 aa28.84■■■□□ 2.21
LCK-214ENST00000619559 KIDINS220Q9ULH0 1771 aa28.83■■■□□ 2.21
LCK-214ENST00000619559 LRPPRCP42704 1394 aaKnown RBP28.82■■■□□ 2.2
LCK-214ENST00000619559 DISP3Q9P2K9 1392 aa28.82■■■□□ 2.2
LCK-214ENST00000619559 IRX6P78412 446 aaPredicted RBP28.82■■■□□ 2.2
LCK-214ENST00000619559 PARD3Q8TEW0 1356 aa28.81■■■□□ 2.2
LCK-214ENST00000619559 CFAP74Q9C0B2 1584 aa28.81■■■□□ 2.2
LCK-214ENST00000619559 KIAA1210Q9ULL0 1709 aa28.79■■■□□ 2.2
LCK-214ENST00000619559 TMF1P82094 1093 aa28.78■■■□□ 2.2
LCK-214ENST00000619559 WASHC2CQ9Y4E1 1318 aa28.78■■■□□ 2.2
LCK-214ENST00000619559 KIF3BO15066 747 aa28.76■■■□□ 2.19
LCK-214ENST00000619559 PER1O15534 1290 aaPredicted RBP28.76■■■□□ 2.19
LCK-214ENST00000619559 ZNF518AQ6AHZ1 1483 aa28.75■■■□□ 2.19
LCK-214ENST00000619559 PPP4R2Q9NY27 417 aa28.75■■■□□ 2.19
LCK-214ENST00000619559 MYT1LQ9UL68 1186 aa28.75■■■□□ 2.19
LCK-214ENST00000619559 NUDCQ9Y266 331 aa28.74■■■□□ 2.19
LCK-214ENST00000619559 KIF1BO60333 1816 aa28.74■■■□□ 2.19
LCK-214ENST00000619559 EFCAB6Q5THR3 1501 aa28.73■■■□□ 2.19
LCK-214ENST00000619559 NLRP13Q86W25 1043 aa28.73■■■□□ 2.19
LCK-214ENST00000619559 NPM1P06748 294 aaKnown RBP eCLIP28.72■■■□□ 2.19
LCK-214ENST00000619559 OSCARQ8IYS5 282 aa28.72■■■□□ 2.19
LCK-214ENST00000619559 SCAF11Q99590 1463 aaKnown RBP28.71■■■□□ 2.19
LCK-214ENST00000619559 LMTK2Q8IWU2 1503 aa28.71■■■□□ 2.19
LCK-214ENST00000619559 PPRC1Q5VV67 1664 aaKnown RBP28.69■■■□□ 2.18
LCK-214ENST00000619559 IFT172Q9UG01 1749 aa28.68■■■□□ 2.18
LCK-214ENST00000619559 PANK3Q9H999 370 aa28.66■■■□□ 2.18
LCK-214ENST00000619559 MAP3K4Q9Y6R4 1608 aa28.66■■■□□ 2.18
LCK-214ENST00000619559 MYOM2P54296 1465 aa28.66■■■□□ 2.18
LCK-214ENST00000619559 CD109Q6YHK3 1445 aa28.64■■■□□ 2.18
LCK-214ENST00000619559 POGZQ7Z3K3 1410 aa28.63■■■□□ 2.17
LCK-214ENST00000619559 RNF123Q5XPI4 1314 aa28.63■■■□□ 2.17
LCK-214ENST00000619559 SYNMO15061 1565 aa28.63■■■□□ 2.17
LCK-214ENST00000619559 HECW2Q9P2P5 1572 aa28.62■■■□□ 2.17
LCK-214ENST00000619559 MROH2AA6NES4 1674 aa28.62■■■□□ 2.17
LCK-214ENST00000619559 ZMYM4Q5VZL5 1548 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms