RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 RRP9O43818 475 aaKnown RBP13.86□□□□□ -0.19
HNF4A-209ENST00000619550 MTERF4Q7Z6M4 381 aaKnown RBP13.86□□□□□ -0.19
HNF4A-209ENST00000619550 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
HNF4A-209ENST00000619550 NFKBIBQ15653 356 aa13.86□□□□□ -0.19
HNF4A-209ENST00000619550 PMFBP1Q8TBY8 1022 aa13.86□□□□□ -0.19
HNF4A-209ENST00000619550 AQRO60306 1485 aaKnown RBP eCLIP13.86□□□□□ -0.192e-7■■■■□ 26.1
HNF4A-209ENST00000619550 UACAQ9BZF9 1416 aa13.86□□□□□ -0.19
HNF4A-209ENST00000619550 STK26Q9P289 416 aa13.85□□□□□ -0.19
HNF4A-209ENST00000619550 MYOM3Q5VTT5 1437 aa13.84□□□□□ -0.19
HNF4A-209ENST00000619550 CNTLNQ9NXG0 1405 aa13.84□□□□□ -0.19
HNF4A-209ENST00000619550 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
HNF4A-209ENST00000619550 CFAP44Q96MT7 982 aa13.83□□□□□ -0.19
HNF4A-209ENST00000619550 TPM2P07951 284 aa13.83□□□□□ -0.2
HNF4A-209ENST00000619550 CHMP4AQ9BY43 222 aa13.83□□□□□ -0.2
HNF4A-209ENST00000619550 A0A0U1RQG5 324 aaPredicted RBP13.82□□□□□ -0.2
HNF4A-209ENST00000619550 SAFB2Q14151 953 aaKnown RBP eCLIP13.82□□□□□ -0.2
HNF4A-209ENST00000619550 CRBNQ96SW2 442 aa13.82□□□□□ -0.2
HNF4A-209ENST00000619550 TERF2IPQ9NYB0 399 aa13.82□□□□□ -0.2
HNF4A-209ENST00000619550 CCDC7Q96M83 1385 aa13.82□□□□□ -0.2
HNF4A-209ENST00000619550 DDX11L8A8MPP1 907 aa13.82□□□□□ -0.2
HNF4A-209ENST00000619550 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
HNF4A-209ENST00000619550 STAC3Q96MF2 364 aa13.81□□□□□ -0.2
HNF4A-209ENST00000619550 CCDC144AA2RUR9 1427 aa13.81□□□□□ -0.2
HNF4A-209ENST00000619550 VGFO15240 615 aaPredicted RBP13.81□□□□□ -0.2
HNF4A-209ENST00000619550 KIAA2012Q0VF49 1180 aa13.81□□□□□ -0.2
HNF4A-209ENST00000619550 PLCB2Q00722 1185 aa13.8□□□□□ -0.2
HNF4A-209ENST00000619550 PLIN1O60240 522 aa13.8□□□□□ -0.2
HNF4A-209ENST00000619550 WASHC2AQ641Q2 1341 aa13.79□□□□□ -0.2
HNF4A-209ENST00000619550 BRPF3Q9ULD4 1205 aa13.79□□□□□ -0.2
HNF4A-209ENST00000619550 CALD1Q05682 793 aaKnown RBP13.79□□□□□ -0.2
HNF4A-209ENST00000619550 CUX1P39880 1505 aa13.79□□□□□ -0.2
HNF4A-209ENST00000619550 TNNT3P45378 269 aaPredicted RBP13.78□□□□□ -0.2
HNF4A-209ENST00000619550 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.78□□□□□ -0.2
HNF4A-209ENST00000619550 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
HNF4A-209ENST00000619550 MFAP1P55081 439 aaKnown RBP13.78□□□□□ -0.2
HNF4A-209ENST00000619550 FAM69CQ0P6D2 419 aa13.77□□□□□ -0.21
HNF4A-209ENST00000619550 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
HNF4A-209ENST00000619550 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
HNF4A-209ENST00000619550 NESP48681 1621 aa13.75□□□□□ -0.21
HNF4A-209ENST00000619550 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
HNF4A-209ENST00000619550 SKOR2Q2VWA4 1001 aaPredicted RBP13.75□□□□□ -0.21
HNF4A-209ENST00000619550 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
HNF4A-209ENST00000619550 CENPJQ9HC77 1338 aaPredicted RBP13.75□□□□□ -0.21
HNF4A-209ENST00000619550 IPO8O15397 1037 aaKnown RBP13.74□□□□□ -0.21
HNF4A-209ENST00000619550 USP47Q96K76 1375 aa13.74□□□□□ -0.21
HNF4A-209ENST00000619550 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
HNF4A-209ENST00000619550 BACH2Q9BYV9 841 aa13.74□□□□□ -0.21
HNF4A-209ENST00000619550 GOLGA6L6A8MZA4 724 aa13.73□□□□□ -0.21
HNF4A-209ENST00000619550 CGNL1Q0VF96 1302 aa13.73□□□□□ -0.21
HNF4A-209ENST00000619550 TPRNQ4KMQ1 711 aa13.73□□□□□ -0.21
HNF4A-209ENST00000619550 ST20-MTHFSA0A0A6YYL1 179 aa13.73□□□□□ -0.21
HNF4A-209ENST00000619550 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
HNF4A-209ENST00000619550 SYNJ1O43426 1573 aa13.72□□□□□ -0.21
HNF4A-209ENST00000619550 FGD6Q6ZV73 1430 aa13.72□□□□□ -0.21
HNF4A-209ENST00000619550 EFCAB5A4FU69 1503 aa13.72□□□□□ -0.21
HNF4A-209ENST00000619550 NRDCO43847 1150 aa13.72□□□□□ -0.21
HNF4A-209ENST00000619550 PRG4Q92954 1404 aaPredicted RBP13.72□□□□□ -0.21
HNF4A-209ENST00000619550 SOX12O15370 315 aa13.71□□□□□ -0.21
HNF4A-209ENST00000619550 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
HNF4A-209ENST00000619550 ARID3AQ99856 593 aa13.71□□□□□ -0.21
HNF4A-209ENST00000619550 FYCO1Q9BQS8 1478 aa13.71□□□□□ -0.21
HNF4A-209ENST00000619550 SYAP1Q96A49 352 aaPredicted RBP13.71□□□□□ -0.21
HNF4A-209ENST00000619550 SMG6Q86US8 1419 aaKnown RBP13.71□□□□□ -0.22
HNF4A-209ENST00000619550 NGDNQ8NEJ9 315 aaKnown RBP13.71□□□□□ -0.22
HNF4A-209ENST00000619550 CHMP5Q9NZZ3 219 aa13.71□□□□□ -0.22
HNF4A-209ENST00000619550 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.7□□□□□ -0.22
HNF4A-209ENST00000619550 LRRC9Q6ZRR7 1453 aa13.7□□□□□ -0.22
HNF4A-209ENST00000619550 MCCP23508 829 aa13.7□□□□□ -0.22
HNF4A-209ENST00000619550 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
HNF4A-209ENST00000619550 NPHP1O15259 732 aa13.69□□□□□ -0.22
HNF4A-209ENST00000619550 U2AF1L5P0DN76 240 aaPredicted RBP13.69□□□□□ -0.22
HNF4A-209ENST00000619550 U2AF1Q01081 240 aaKnown RBP eCLIP13.69□□□□□ -0.22
HNF4A-209ENST00000619550 ITPRIPQ8IWB1 547 aa13.69□□□□□ -0.22
HNF4A-209ENST00000619550 MRE11P49959 708 aa13.69□□□□□ -0.22
HNF4A-209ENST00000619550 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
HNF4A-209ENST00000619550 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
HNF4A-209ENST00000619550 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
HNF4A-209ENST00000619550 FRAT2O75474 233 aaPredicted RBP13.68□□□□□ -0.22
HNF4A-209ENST00000619550 CSB-PGBD3P0DP91 1061 aa13.68□□□□□ -0.22
HNF4A-209ENST00000619550 E9PSI1 815 aa13.67□□□□□ -0.22
HNF4A-209ENST00000619550 ISY1Q9ULR0 285 aaKnown RBP13.67□□□□□ -0.22
HNF4A-209ENST00000619550 BRD4O60885 1362 aaPredicted RBP13.67□□□□□ -0.22
HNF4A-209ENST00000619550 BIVM-ERCC5R4GMW8 1640 aa13.67□□□□□ -0.22
HNF4A-209ENST00000619550 ABCA10Q8WWZ4 1543 aa13.66□□□□□ -0.22
HNF4A-209ENST00000619550 CCDC146Q8IYE0 955 aa13.66□□□□□ -0.22
HNF4A-209ENST00000619550 PDE4CQ08493 712 aa13.66□□□□□ -0.22
HNF4A-209ENST00000619550 CLUAP1Q96AJ1 413 aa13.66□□□□□ -0.22
HNF4A-209ENST00000619550 TRAK1Q9UPV9 953 aa13.66□□□□□ -0.22
HNF4A-209ENST00000619550 DDX49Q9Y6V7 483 aaKnown RBP13.66□□□□□ -0.22
HNF4A-209ENST00000619550 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
HNF4A-209ENST00000619550 EVC2Q86UK5 1308 aa13.65□□□□□ -0.22
HNF4A-209ENST00000619550 PANK3Q9H999 370 aa13.65□□□□□ -0.22
HNF4A-209ENST00000619550 CUL7Q14999 1698 aa13.65□□□□□ -0.22
HNF4A-209ENST00000619550 ARAP1Q96P48 1450 aa13.65□□□□□ -0.22
HNF4A-209ENST00000619550 LMOD3Q0VAK6 560 aa13.65□□□□□ -0.22
HNF4A-209ENST00000619550 FAM13BQ9NYF5 915 aa13.65□□□□□ -0.22
HNF4A-209ENST00000619550 GOLGA6L4A6NEF3 574 aa13.64□□□□□ -0.23
HNF4A-209ENST00000619550 HDAC5Q9UQL6 1122 aa13.64□□□□□ -0.23
HNF4A-209ENST00000619550 OS9Q13438 667 aaPredicted RBP13.64□□□□□ -0.23
HNF4A-209ENST00000619550 ANKRD50Q9ULJ7 1429 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms