RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
HNF4A-209ENST00000619550 DCAF8L2P0C7V8 631 aa18.92■□□□□ 0.62
HNF4A-209ENST00000619550 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
HNF4A-209ENST00000619550 MYT1Q01538 1121 aa18.06■□□□□ 0.48
HNF4A-209ENST00000619550 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
HNF4A-209ENST00000619550 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
HNF4A-209ENST00000619550 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
HNF4A-209ENST00000619550 ZEB1P37275 1124 aaPredicted RBP17.14■□□□□ 0.33
HNF4A-209ENST00000619550 HRCP23327 699 aa17.11■□□□□ 0.33
HNF4A-209ENST00000619550 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
HNF4A-209ENST00000619550 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
HNF4A-209ENST00000619550 APLP2Q06481 763 aa16.88■□□□□ 0.29
HNF4A-209ENST00000619550 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
HNF4A-209ENST00000619550 TRIM26Q12899 539 aaPredicted RBP16.72■□□□□ 0.27
HNF4A-209ENST00000619550 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
HNF4A-209ENST00000619550 CCER1Q8TC90 406 aaPredicted RBP16.68■□□□□ 0.26
HNF4A-209ENST00000619550 TRIM41Q8WV44 630 aa16.62■□□□□ 0.25
HNF4A-209ENST00000619550 PPARGC1BQ86YN6 1023 aaKnown RBP16.62■□□□□ 0.25
HNF4A-209ENST00000619550 ERICH6Q7L0X2 663 aa16.57■□□□□ 0.24
HNF4A-209ENST00000619550 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
HNF4A-209ENST00000619550 CCDC180Q9P1Z9 1646 aa16.47■□□□□ 0.23
HNF4A-209ENST00000619550 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
HNF4A-209ENST00000619550 ABCC9O60706 1549 aa16.36■□□□□ 0.21
HNF4A-209ENST00000619550 LOC105371045A0A1W2PR82 267 aa16.35■□□□□ 0.21
HNF4A-209ENST00000619550 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
HNF4A-209ENST00000619550 RANGAP1P46060 587 aaPredicted RBP16.25■□□□□ 0.19
HNF4A-209ENST00000619550 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
HNF4A-209ENST00000619550 NEFLP07196 543 aa16.21■□□□□ 0.19
HNF4A-209ENST00000619550 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
HNF4A-209ENST00000619550 GTF3C3Q9Y5Q9 886 aa16.12■□□□□ 0.17
HNF4A-209ENST00000619550 PABPN1Q86U42 306 aaKnown RBP eCLIP16.06■□□□□ 0.165e-6■■■■□ 20.9
HNF4A-209ENST00000619550 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
HNF4A-209ENST00000619550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
HNF4A-209ENST00000619550 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
HNF4A-209ENST00000619550 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
HNF4A-209ENST00000619550 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
HNF4A-209ENST00000619550 HNRNPUL2Q1KMD3 747 aaKnown RBP15.84■□□□□ 0.13
HNF4A-209ENST00000619550 CLSPNQ9HAW4 1339 aa15.82■□□□□ 0.12
HNF4A-209ENST00000619550 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
HNF4A-209ENST00000619550 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
HNF4A-209ENST00000619550 RTL5Q5HYW3 569 aaPredicted RBP15.71■□□□□ 0.11
HNF4A-209ENST00000619550 MYT1LQ9UL68 1186 aa15.71■□□□□ 0.11
HNF4A-209ENST00000619550 NACADO15069 1562 aa15.66■□□□□ 0.1
HNF4A-209ENST00000619550 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
HNF4A-209ENST00000619550 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
HNF4A-209ENST00000619550 ITGAEP38570 1179 aa15.58■□□□□ 0.08
HNF4A-209ENST00000619550 MYO15BQ96JP2 1530 aa15.56■□□□□ 0.08
HNF4A-209ENST00000619550 BCANQ96GW7 911 aa15.55■□□□□ 0.08
HNF4A-209ENST00000619550 DAXXQ9UER7 740 aaPredicted RBP15.5■□□□□ 0.07
HNF4A-209ENST00000619550 CDK11AQ9UQ88 783 aaPredicted RBP15.46■□□□□ 0.07
HNF4A-209ENST00000619550 ANP32EQ9BTT0 268 aa15.45■□□□□ 0.06
HNF4A-209ENST00000619550 FBLN2P98095 1184 aa15.45■□□□□ 0.06
HNF4A-209ENST00000619550 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
HNF4A-209ENST00000619550 BCL11AQ9H165 835 aa15.39■□□□□ 0.05
HNF4A-209ENST00000619550 ANP32CO43423 234 aa15.38■□□□□ 0.05
HNF4A-209ENST00000619550 FAM50AQ14320 339 aaKnown RBP15.37■□□□□ 0.05
HNF4A-209ENST00000619550 GLIPR1L2Q4G1C9 344 aa15.36■□□□□ 0.05
HNF4A-209ENST00000619550 MIER1Q8N108 512 aa15.3■□□□□ 0.04
HNF4A-209ENST00000619550 FKBP8Q14318 412 aa15.29■□□□□ 0.04
HNF4A-209ENST00000619550 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
HNF4A-209ENST00000619550 POLR3GLQ9BT43 218 aa15.25■□□□□ 0.03
HNF4A-209ENST00000619550 ANP32AP39687 249 aaKnown RBP15.17■□□□□ 0.02
HNF4A-209ENST00000619550 CNGB1Q14028 1251 aaPredicted RBP15.16■□□□□ 0.02
HNF4A-209ENST00000619550 EIF5BO60841 1220 aaKnown RBP15.15■□□□□ 0.02
HNF4A-209ENST00000619550 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
HNF4A-209ENST00000619550 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
HNF4A-209ENST00000619550 RSF1Q96T23 1441 aaPredicted RBP15.11■□□□□ 0.01
HNF4A-209ENST00000619550 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
HNF4A-209ENST00000619550 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
HNF4A-209ENST00000619550 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
HNF4A-209ENST00000619550 DDX10Q13206 875 aaKnown RBP15.05■□□□□ -0
HNF4A-209ENST00000619550 EEA1Q15075 1411 aa15.05■□□□□ -0
HNF4A-209ENST00000619550 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
HNF4A-209ENST00000619550 SUPT16HQ9Y5B9 1047 aaKnown RBP15.01□□□□□ -0.01
HNF4A-209ENST00000619550 HNRNPUQ00839 825 aaKnown RBP eCLIP15.01□□□□□ -0.01
HNF4A-209ENST00000619550 ARID3CA6NKF2 412 aa15□□□□□ -0.01
HNF4A-209ENST00000619550 ZNF777Q9ULD5 760 aaPredicted RBP15□□□□□ -0.01
HNF4A-209ENST00000619550 ESF1Q9H501 851 aaKnown RBP14.97□□□□□ -0.01
HNF4A-209ENST00000619550 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
HNF4A-209ENST00000619550 NBR1Q14596 966 aa14.93□□□□□ -0.02
HNF4A-209ENST00000619550 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
HNF4A-209ENST00000619550 ZNF326Q5BKZ1 582 aaKnown RBP14.93□□□□□ -0.02
HNF4A-209ENST00000619550 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
HNF4A-209ENST00000619550 CEP162Q5TB80 1403 aa14.91□□□□□ -0.02
HNF4A-209ENST00000619550 TONSLQ96HA7 1378 aa14.9□□□□□ -0.02
HNF4A-209ENST00000619550 PRKCSHP14314 528 aaPredicted RBP14.9□□□□□ -0.02
HNF4A-209ENST00000619550 KIF27Q86VH2 1401 aa14.88□□□□□ -0.03
HNF4A-209ENST00000619550 TSPY4P0CV99 314 aa14.87□□□□□ -0.03
HNF4A-209ENST00000619550 TSPY10P0CW01 314 aa14.87□□□□□ -0.03
HNF4A-209ENST00000619550 MTUS2Q5JR59 1369 aa14.87□□□□□ -0.03
HNF4A-209ENST00000619550 CCDC136Q96JN2 1154 aa14.85□□□□□ -0.03
HNF4A-209ENST00000619550 CLIP1P30622 1438 aa14.85□□□□□ -0.03
HNF4A-209ENST00000619550 ERCC6Q03468 1493 aa14.83□□□□□ -0.04
HNF4A-209ENST00000619550 TNIKQ9UKE5 1360 aa14.82□□□□□ -0.04
HNF4A-209ENST00000619550 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
HNF4A-209ENST00000619550 ERICH6BQ5W0A0 696 aa14.82□□□□□ -0.04
HNF4A-209ENST00000619550 FAM9BQ8IZU0 186 aa14.82□□□□□ -0.04
HNF4A-209ENST00000619550 SMARCA2P51531 1590 aa14.82□□□□□ -0.04
HNF4A-209ENST00000619550 IRX6P78412 446 aaPredicted RBP14.81□□□□□ -0.04
HNF4A-209ENST00000619550 CECR2Q9BXF3 1484 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms