RNA–Protein interactions for RNA: ENST00000618882.1

PRAF2-203, Transcript of PRA1 domain family member 2, humanhuman

TSL 5

Gene PRAF2, Length 439 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-203ENST00000618882 RTEL1-TNFRSF6BF6WH68 1400 aa12.16□□□□□ -0.46
PRAF2-203ENST00000618882 TOM1O60784 492 aa12.15□□□□□ -0.46
PRAF2-203ENST00000618882 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
PRAF2-203ENST00000618882 EHBP1L1Q8N3D4 1523 aa12.14□□□□□ -0.47
PRAF2-203ENST00000618882 DNMT1P26358 1616 aaKnown RBP12.14□□□□□ -0.47
PRAF2-203ENST00000618882 TNRQ92752 1358 aa12.14□□□□□ -0.47
PRAF2-203ENST00000618882 KDM5DQ9BY66 1539 aa12.13□□□□□ -0.47
PRAF2-203ENST00000618882 POLR1AO95602 1720 aaPredicted RBP12.13□□□□□ -0.47
PRAF2-203ENST00000618882 DHX29Q7Z478 1369 aaKnown RBP12.13□□□□□ -0.47
PRAF2-203ENST00000618882 PZPP20742 1482 aa12.13□□□□□ -0.47
PRAF2-203ENST00000618882 MBD5Q9P267 1494 aa12.12□□□□□ -0.47
PRAF2-203ENST00000618882 TIAM1Q13009 1591 aa12.12□□□□□ -0.47
PRAF2-203ENST00000618882 MED1Q15648 1581 aaPredicted RBP12.11□□□□□ -0.47
PRAF2-203ENST00000618882 SHANK2Q9UPX8 1470 aa12.11□□□□□ -0.47
PRAF2-203ENST00000618882 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
PRAF2-203ENST00000618882 CCDC141Q6ZP82 1450 aa12.1□□□□□ -0.47
PRAF2-203ENST00000618882 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
PRAF2-203ENST00000618882 KIF3BO15066 747 aa12.1□□□□□ -0.47
PRAF2-203ENST00000618882 HSPA1LP34931 641 aa12.1□□□□□ -0.47
PRAF2-203ENST00000618882 PIP4K2BP78356 416 aa12.1□□□□□ -0.47
PRAF2-203ENST00000618882 RSPH4AQ5TD94 716 aa12.1□□□□□ -0.47
PRAF2-203ENST00000618882 ANKLE2Q86XL3 938 aa12.1□□□□□ -0.47
PRAF2-203ENST00000618882 THEMISQ8N1K5 641 aaPredicted RBP12.1□□□□□ -0.47
PRAF2-203ENST00000618882 NEURL4Q96JN8 1562 aa12.09□□□□□ -0.47
PRAF2-203ENST00000618882 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
PRAF2-203ENST00000618882 ZNF644Q9H582 1327 aaPredicted RBP12.09□□□□□ -0.47
PRAF2-203ENST00000618882 WASHC2CQ9Y4E1 1318 aa12.09□□□□□ -0.47
PRAF2-203ENST00000618882 NPHP4O75161 1426 aaPredicted RBP12.07□□□□□ -0.48
PRAF2-203ENST00000618882 UGGT1Q9NYU2 1555 aa12.07□□□□□ -0.48
PRAF2-203ENST00000618882 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
PRAF2-203ENST00000618882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.06□□□□□ -0.48
PRAF2-203ENST00000618882 MIA2Q96PC5 1412 aa12.06□□□□□ -0.48
PRAF2-203ENST00000618882 FBXO31Q5XUX0 539 aaPredicted RBP12.06□□□□□ -0.48
PRAF2-203ENST00000618882 MED14O60244 1454 aa12.06□□□□□ -0.48
PRAF2-203ENST00000618882 MSH5O43196 834 aa12.05□□□□□ -0.48
PRAF2-203ENST00000618882 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
PRAF2-203ENST00000618882 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
PRAF2-203ENST00000618882 NCOA2Q15596 1464 aa12.03□□□□□ -0.48
PRAF2-203ENST00000618882 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
PRAF2-203ENST00000618882 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
PRAF2-203ENST00000618882 IQGAP1P46940 1657 aa12.03□□□□□ -0.48
PRAF2-203ENST00000618882 SYNMO15061 1565 aa12.02□□□□□ -0.49
PRAF2-203ENST00000618882 ARHGEF5Q12774 1597 aa12.02□□□□□ -0.49
PRAF2-203ENST00000618882 ZC3H13Q5T200 1668 aaKnown RBP12.02□□□□□ -0.49
PRAF2-203ENST00000618882 RNF17Q9BXT8 1623 aaKnown RBP12.01□□□□□ -0.49
PRAF2-203ENST00000618882 ABCC3O15438 1527 aa11.99□□□□□ -0.49
PRAF2-203ENST00000618882 EIF2AK4Q9P2K8 1649 aaKnown RBP11.98□□□□□ -0.49
PRAF2-203ENST00000618882 LRRC7Q96NW7 1537 aa11.98□□□□□ -0.49
PRAF2-203ENST00000618882 ERVK-7P63135 1459 aa11.98□□□□□ -0.49
PRAF2-203ENST00000618882 ALKQ9UM73 1620 aa11.97□□□□□ -0.49
PRAF2-203ENST00000618882 MAST1Q9Y2H9 1570 aa11.96□□□□□ -0.49
PRAF2-203ENST00000618882 SCAF11Q99590 1463 aaKnown RBP11.96□□□□□ -0.49
PRAF2-203ENST00000618882 EID1Q9Y6B2 187 aa11.93□□□□□ -0.5
PRAF2-203ENST00000618882 STRCP1A6NGW2 1772 aa11.92□□□□□ -0.5
PRAF2-203ENST00000618882 SLIT1O75093 1534 aa11.92□□□□□ -0.5
PRAF2-203ENST00000618882 DUOX2Q9NRD8 1548 aa11.92□□□□□ -0.5
PRAF2-203ENST00000618882 UBR1Q8IWV7 1749 aa11.92□□□□□ -0.5
PRAF2-203ENST00000618882 LRRC9Q6ZRR7 1453 aa11.91□□□□□ -0.5
PRAF2-203ENST00000618882 ARHGAP23Q9P227 1491 aa11.91□□□□□ -0.5
PRAF2-203ENST00000618882 MROH1Q8NDA8 1641 aa11.91□□□□□ -0.5
PRAF2-203ENST00000618882 TXNDC2Q86VQ3 553 aa11.91□□□□□ -0.5
PRAF2-203ENST00000618882 ARHGAP31Q2M1Z3 1444 aa11.91□□□□□ -0.5
PRAF2-203ENST00000618882 CEP152O94986 1710 aa11.9□□□□□ -0.5
PRAF2-203ENST00000618882 MYOM3Q5VTT5 1437 aa11.9□□□□□ -0.5
PRAF2-203ENST00000618882 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
PRAF2-203ENST00000618882 PRDM15P57071 1507 aaPredicted RBP11.89□□□□□ -0.51
PRAF2-203ENST00000618882 FAM135BQ49AJ0 1406 aa11.88□□□□□ -0.51
PRAF2-203ENST00000618882 VPS8Q8N3P4 1428 aa11.88□□□□□ -0.51
PRAF2-203ENST00000618882 ERBINQ96RT1 1412 aa11.88□□□□□ -0.51
PRAF2-203ENST00000618882 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
PRAF2-203ENST00000618882 KANK1Q14678 1352 aa11.88□□□□□ -0.51
PRAF2-203ENST00000618882 LTKP29376 864 aa11.87□□□□□ -0.51
PRAF2-203ENST00000618882 KIF15Q9NS87 1388 aa11.87□□□□□ -0.51
PRAF2-203ENST00000618882 TMEM2Q9UHN6 1383 aa11.87□□□□□ -0.51
PRAF2-203ENST00000618882 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
PRAF2-203ENST00000618882 EFCAB6Q5THR3 1501 aa11.85□□□□□ -0.51
PRAF2-203ENST00000618882 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
PRAF2-203ENST00000618882 TMEM94Q12767 1356 aa11.84□□□□□ -0.51
PRAF2-203ENST00000618882 CFAP65Q6ZU64 1925 aaKnown RBP11.84□□□□□ -0.51
PRAF2-203ENST00000618882 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
PRAF2-203ENST00000618882 PIK3C2BO00750 1634 aa11.83□□□□□ -0.52
PRAF2-203ENST00000618882 NPM3O75607 178 aaKnown RBP11.83□□□□□ -0.52
PRAF2-203ENST00000618882 KCNA6P17658 529 aa11.83□□□□□ -0.52
PRAF2-203ENST00000618882 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
PRAF2-203ENST00000618882 RGS17Q9UGC6 210 aaPredicted RBP11.83□□□□□ -0.52
PRAF2-203ENST00000618882 XIRP1Q702N8 1843 aaKnown RBP11.82□□□□□ -0.52
PRAF2-203ENST00000618882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.52
PRAF2-203ENST00000618882 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
PRAF2-203ENST00000618882 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
PRAF2-203ENST00000618882 ROBO1Q9Y6N7 1651 aa11.81□□□□□ -0.52
PRAF2-203ENST00000618882 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
PRAF2-203ENST00000618882 MSH6P52701 1360 aa11.8□□□□□ -0.52
PRAF2-203ENST00000618882 ABCC5O15440 1437 aa11.8□□□□□ -0.52
PRAF2-203ENST00000618882 RRP7BPQ9NSQ0 103 aa11.8□□□□□ -0.52
PRAF2-203ENST00000618882 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
PRAF2-203ENST00000618882 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
PRAF2-203ENST00000618882 DAPK1P53355 1430 aa11.79□□□□□ -0.52
PRAF2-203ENST00000618882 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
PRAF2-203ENST00000618882 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
PRAF2-203ENST00000618882 PTPN23Q9H3S7 1636 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms