RNA–Protein interactions for RNA: ENST00000618882.1

PRAF2-203, Transcript of PRA1 domain family member 2, humanhuman

TSL 5

Gene PRAF2, Length 439 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-203ENST00000618882 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
PRAF2-203ENST00000618882 ABCC9O60706 1549 aa17.39■□□□□ 0.37
PRAF2-203ENST00000618882 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
PRAF2-203ENST00000618882 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
PRAF2-203ENST00000618882 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
PRAF2-203ENST00000618882 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
PRAF2-203ENST00000618882 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
PRAF2-203ENST00000618882 NACADO15069 1562 aa16.35■□□□□ 0.21
PRAF2-203ENST00000618882 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
PRAF2-203ENST00000618882 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
PRAF2-203ENST00000618882 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
PRAF2-203ENST00000618882 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
PRAF2-203ENST00000618882 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.14
PRAF2-203ENST00000618882 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
PRAF2-203ENST00000618882 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
PRAF2-203ENST00000618882 ZCCHC6Q5VYS8 1495 aaKnown RBP15.77■□□□□ 0.11
PRAF2-203ENST00000618882 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
PRAF2-203ENST00000618882 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
PRAF2-203ENST00000618882 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
PRAF2-203ENST00000618882 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
PRAF2-203ENST00000618882 DNAJC5Q9H3Z4 198 aa15.32■□□□□ 0.04
PRAF2-203ENST00000618882 CUX2O14529 1486 aa15.14■□□□□ 0.01
PRAF2-203ENST00000618882 ERCC6Q03468 1493 aa15.09■□□□□ 0.01
PRAF2-203ENST00000618882 NCAPD3P42695 1498 aa15.08■□□□□ 0
PRAF2-203ENST00000618882 ATAD2BQ9ULI0 1458 aa14.99□□□□□ -0.01
PRAF2-203ENST00000618882 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
PRAF2-203ENST00000618882 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
PRAF2-203ENST00000618882 SMARCA4P51532 1647 aa14.91□□□□□ -0.02
PRAF2-203ENST00000618882 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
PRAF2-203ENST00000618882 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
PRAF2-203ENST00000618882 NESP48681 1621 aa14.84□□□□□ -0.03
PRAF2-203ENST00000618882 PHF23Q9BUL5 403 aaPredicted RBP14.79□□□□□ -0.04
PRAF2-203ENST00000618882 PEG3Q9GZU2 1588 aa14.79□□□□□ -0.04
PRAF2-203ENST00000618882 LAMC3Q9Y6N6 1575 aa14.79□□□□□ -0.04
PRAF2-203ENST00000618882 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
PRAF2-203ENST00000618882 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
PRAF2-203ENST00000618882 KIF21AQ7Z4S6 1674 aa14.66□□□□□ -0.06
PRAF2-203ENST00000618882 MROH2BQ7Z745 1585 aa14.64□□□□□ -0.07
PRAF2-203ENST00000618882 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
PRAF2-203ENST00000618882 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
PRAF2-203ENST00000618882 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
PRAF2-203ENST00000618882 WDR62O43379 1518 aa14.56□□□□□ -0.08
PRAF2-203ENST00000618882 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
PRAF2-203ENST00000618882 WIZO95785 1651 aa14.45□□□□□ -0.1
PRAF2-203ENST00000618882 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
PRAF2-203ENST00000618882 CFTRP13569 1480 aa14.39□□□□□ -0.11
PRAF2-203ENST00000618882 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
PRAF2-203ENST00000618882 TOP2AP11388 1531 aaKnown RBP14.31□□□□□ -0.12
PRAF2-203ENST00000618882 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
PRAF2-203ENST00000618882 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
PRAF2-203ENST00000618882 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
PRAF2-203ENST00000618882 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
PRAF2-203ENST00000618882 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
PRAF2-203ENST00000618882 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
PRAF2-203ENST00000618882 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
PRAF2-203ENST00000618882 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
PRAF2-203ENST00000618882 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
PRAF2-203ENST00000618882 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
PRAF2-203ENST00000618882 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
PRAF2-203ENST00000618882 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
PRAF2-203ENST00000618882 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
PRAF2-203ENST00000618882 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
PRAF2-203ENST00000618882 DNMBPQ6XZF7 1577 aa14.08□□□□□ -0.16
PRAF2-203ENST00000618882 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
PRAF2-203ENST00000618882 CHD1O14646 1710 aa14□□□□□ -0.17
PRAF2-203ENST00000618882 TARBP1Q13395 1621 aaKnown RBP14□□□□□ -0.17
PRAF2-203ENST00000618882 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRAF2-203ENST00000618882 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
PRAF2-203ENST00000618882 FBLN2P98095 1184 aa13.98□□□□□ -0.17
PRAF2-203ENST00000618882 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
PRAF2-203ENST00000618882 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
PRAF2-203ENST00000618882 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
PRAF2-203ENST00000618882 SOGA1O94964 1423 aa13.91□□□□□ -0.18
PRAF2-203ENST00000618882 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
PRAF2-203ENST00000618882 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
PRAF2-203ENST00000618882 SNAPC4Q5SXM2 1469 aa13.88□□□□□ -0.19
PRAF2-203ENST00000618882 MAGI1Q96QZ7 1491 aaPredicted RBP13.88□□□□□ -0.19
PRAF2-203ENST00000618882 TDRD9Q8NDG6 1382 aaKnown RBP13.88□□□□□ -0.19
PRAF2-203ENST00000618882 CLASP1Q7Z460 1538 aa13.86□□□□□ -0.19
PRAF2-203ENST00000618882 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
PRAF2-203ENST00000618882 FGD5Q6ZNL6 1462 aa13.86□□□□□ -0.19
PRAF2-203ENST00000618882 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
PRAF2-203ENST00000618882 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
PRAF2-203ENST00000618882 SYNJ2O15056 1496 aa13.82□□□□□ -0.2
PRAF2-203ENST00000618882 CUX1P39880 1505 aa13.79□□□□□ -0.2
PRAF2-203ENST00000618882 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
PRAF2-203ENST00000618882 PBRM1Q86U86 1689 aa13.73□□□□□ -0.21
PRAF2-203ENST00000618882 ABCA10Q8WWZ4 1543 aa13.7□□□□□ -0.22
PRAF2-203ENST00000618882 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
PRAF2-203ENST00000618882 GRIN2AQ12879 1464 aa13.65□□□□□ -0.22
PRAF2-203ENST00000618882 WRNQ14191 1432 aaPredicted RBP eCLIP13.63□□□□□ -0.23
PRAF2-203ENST00000618882 NUP160Q12769 1436 aa13.61□□□□□ -0.23
PRAF2-203ENST00000618882 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
PRAF2-203ENST00000618882 CEP170Q5SW79 1584 aa13.59□□□□□ -0.23
PRAF2-203ENST00000618882 FHAD1B1AJZ9 1412 aa13.58□□□□□ -0.24
PRAF2-203ENST00000618882 ERCC6L2Q5T890 1561 aa13.57□□□□□ -0.24
PRAF2-203ENST00000618882 SHROOM2Q13796 1616 aa13.56□□□□□ -0.24
PRAF2-203ENST00000618882 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
PRAF2-203ENST00000618882 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
PRAF2-203ENST00000618882 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms