RNA–Protein interactions for RNA: ENST00000615729.4

UBXN8-207, Transcript of UBX domain protein 8, humanhuman

TSL 1 (best) BASIC

Gene UBXN8, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-207ENST00000615729 CASKIN1Q8WXD9 1431 aa16.51■□□□□ 0.23
UBXN8-207ENST00000615729 CPS1P31327 1500 aa16.5■□□□□ 0.23
UBXN8-207ENST00000615729 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
UBXN8-207ENST00000615729 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
UBXN8-207ENST00000615729 A2MP01023 1474 aa16.49■□□□□ 0.23
UBXN8-207ENST00000615729 PLEKHH2Q8IVE3 1493 aa16.48■□□□□ 0.23
UBXN8-207ENST00000615729 PLXNC1O60486 1568 aa16.48■□□□□ 0.23
UBXN8-207ENST00000615729 HNRNPMP52272 730 aaKnown RBP eCLIP16.47■□□□□ 0.23
UBXN8-207ENST00000615729 PIP4K2BP78356 416 aa16.47■□□□□ 0.23
UBXN8-207ENST00000615729 GGT6Q6P531 493 aa16.47■□□□□ 0.23
UBXN8-207ENST00000615729 MYO3AQ8NEV4 1616 aa16.47■□□□□ 0.23
UBXN8-207ENST00000615729 SHANK2Q9UPX8 1470 aa16.47■□□□□ 0.23
UBXN8-207ENST00000615729 GPATCH8Q9UKJ3 1502 aaKnown RBP16.46■□□□□ 0.23
UBXN8-207ENST00000615729 ZNF777Q9ULD5 760 aaPredicted RBP16.46■□□□□ 0.23
UBXN8-207ENST00000615729 ATP7AQ04656 1500 aa16.45■□□□□ 0.22
UBXN8-207ENST00000615729 SAMD1Q6SPF0 538 aaPredicted RBP16.43■□□□□ 0.22
UBXN8-207ENST00000615729 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
UBXN8-207ENST00000615729 CFDP1Q9UEE9 299 aaPredicted RBP16.43■□□□□ 0.22
UBXN8-207ENST00000615729 SYCP2Q9BX26 1530 aa16.43■□□□□ 0.22
UBXN8-207ENST00000615729 CLTCQ00610 1675 aaKnown RBP16.41■□□□□ 0.22
UBXN8-207ENST00000615729 THEMISQ8N1K5 641 aaPredicted RBP16.41■□□□□ 0.22
UBXN8-207ENST00000615729 DNMT1P26358 1616 aaKnown RBP16.41■□□□□ 0.22
UBXN8-207ENST00000615729 INO80Q9ULG1 1556 aaPredicted RBP16.4■□□□□ 0.22
UBXN8-207ENST00000615729 TNRQ92752 1358 aa16.39■□□□□ 0.21
UBXN8-207ENST00000615729 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
UBXN8-207ENST00000615729 LRRIQ1Q96JM4 1722 aa16.39■□□□□ 0.21
UBXN8-207ENST00000615729 RTEL1-TNFRSF6BF6WH68 1400 aa16.38■□□□□ 0.21
UBXN8-207ENST00000615729 MED14O60244 1454 aa16.38■□□□□ 0.21
UBXN8-207ENST00000615729 FYCO1Q9BQS8 1478 aa16.38■□□□□ 0.21
UBXN8-207ENST00000615729 SUPT6HQ7KZ85 1726 aaKnown RBP16.38■□□□□ 0.21
UBXN8-207ENST00000615729 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
UBXN8-207ENST00000615729 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
UBXN8-207ENST00000615729 NEURL4Q96JN8 1562 aa16.37■□□□□ 0.21
UBXN8-207ENST00000615729 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
UBXN8-207ENST00000615729 PZPP20742 1482 aa16.35■□□□□ 0.21
UBXN8-207ENST00000615729 FBXO31Q5XUX0 539 aaPredicted RBP16.35■□□□□ 0.21
UBXN8-207ENST00000615729 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
UBXN8-207ENST00000615729 NLRP1Q9C000 1473 aa16.35■□□□□ 0.21
UBXN8-207ENST00000615729 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
UBXN8-207ENST00000615729 MIA2Q96PC5 1412 aa16.34■□□□□ 0.21
UBXN8-207ENST00000615729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.33■□□□□ 0.2
UBXN8-207ENST00000615729 NPHP4O75161 1426 aaPredicted RBP16.33■□□□□ 0.2
UBXN8-207ENST00000615729 MBD5Q9P267 1494 aa16.33■□□□□ 0.2
UBXN8-207ENST00000615729 ALKQ9UM73 1620 aa16.33■□□□□ 0.2
UBXN8-207ENST00000615729 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
UBXN8-207ENST00000615729 ADGBQ8N7X0 1667 aa16.3■□□□□ 0.2
UBXN8-207ENST00000615729 WASHC2CQ9Y4E1 1318 aa16.3■□□□□ 0.2
UBXN8-207ENST00000615729 KIF3BO15066 747 aa16.3■□□□□ 0.2
UBXN8-207ENST00000615729 DEPDC5O75140 1603 aa16.3■□□□□ 0.2
UBXN8-207ENST00000615729 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
UBXN8-207ENST00000615729 POLR1AO95602 1720 aaPredicted RBP16.28■□□□□ 0.2
UBXN8-207ENST00000615729 LRRC7Q96NW7 1537 aa16.28■□□□□ 0.2
UBXN8-207ENST00000615729 KDM5DQ9BY66 1539 aa16.28■□□□□ 0.2
UBXN8-207ENST00000615729 ZNF644Q9H582 1327 aaPredicted RBP16.27■□□□□ 0.2
UBXN8-207ENST00000615729 UGGT1Q9NYU2 1555 aa16.26■□□□□ 0.19
UBXN8-207ENST00000615729 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
UBXN8-207ENST00000615729 RNF17Q9BXT8 1623 aaKnown RBP16.21■□□□□ 0.19
UBXN8-207ENST00000615729 SYNMO15061 1565 aa16.21■□□□□ 0.18
UBXN8-207ENST00000615729 FAM135BQ49AJ0 1406 aa16.2■□□□□ 0.18
UBXN8-207ENST00000615729 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
UBXN8-207ENST00000615729 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
UBXN8-207ENST00000615729 CCDC141Q6ZP82 1450 aa16.19■□□□□ 0.18
UBXN8-207ENST00000615729 IQGAP1P46940 1657 aa16.18■□□□□ 0.18
UBXN8-207ENST00000615729 TIAM1Q13009 1591 aa16.17■□□□□ 0.18
UBXN8-207ENST00000615729 MYCNP04198 464 aaPredicted RBP16.16■□□□□ 0.18
UBXN8-207ENST00000615729 POTEAQ6S8J7 498 aa16.16■□□□□ 0.18
UBXN8-207ENST00000615729 TSPY4P0CV99 314 aa16.15■□□□□ 0.18
UBXN8-207ENST00000615729 TSPY10P0CW01 314 aa16.15■□□□□ 0.18
UBXN8-207ENST00000615729 SCAF11Q99590 1463 aaKnown RBP16.14■□□□□ 0.17
UBXN8-207ENST00000615729 EHBP1L1Q8N3D4 1523 aa16.13■□□□□ 0.17
UBXN8-207ENST00000615729 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
UBXN8-207ENST00000615729 ARHGAP23Q9P227 1491 aa16.12■□□□□ 0.17
UBXN8-207ENST00000615729 LTKP29376 864 aa16.12■□□□□ 0.17
UBXN8-207ENST00000615729 TXNDC2Q86VQ3 553 aa16.12■□□□□ 0.17
UBXN8-207ENST00000615729 STRCP1A6NGW2 1772 aa16.11■□□□□ 0.17
UBXN8-207ENST00000615729 ABCC3O15438 1527 aa16.11■□□□□ 0.17
UBXN8-207ENST00000615729 POLA2Q14181 598 aa16.11■□□□□ 0.17
UBXN8-207ENST00000615729 EID1Q9Y6B2 187 aa16.11■□□□□ 0.17
UBXN8-207ENST00000615729 SLIT1O75093 1534 aa16.1■□□□□ 0.17
UBXN8-207ENST00000615729 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
UBXN8-207ENST00000615729 NCOA2Q15596 1464 aa16.09■□□□□ 0.17
UBXN8-207ENST00000615729 ARHGEF5Q12774 1597 aa16.09■□□□□ 0.17
UBXN8-207ENST00000615729 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.17
UBXN8-207ENST00000615729 ARHGAP31Q2M1Z3 1444 aa16.07■□□□□ 0.16
UBXN8-207ENST00000615729 KCNA6P17658 529 aa16.06■□□□□ 0.16
UBXN8-207ENST00000615729 TMEM94Q12767 1356 aa16.05■□□□□ 0.16
UBXN8-207ENST00000615729 TMEM2Q9UHN6 1383 aa16.04■□□□□ 0.16
UBXN8-207ENST00000615729 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
UBXN8-207ENST00000615729 UBR1Q8IWV7 1749 aa16.02■□□□□ 0.15
UBXN8-207ENST00000615729 EIF2AK4Q9P2K8 1649 aaKnown RBP16.01■□□□□ 0.15
UBXN8-207ENST00000615729 JCADQ9P266 1359 aa16■□□□□ 0.15
UBXN8-207ENST00000615729 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
UBXN8-207ENST00000615729 PROSER2Q86WR7 435 aaPredicted RBP16■□□□□ 0.15
UBXN8-207ENST00000615729 MROH1Q8NDA8 1641 aa15.98■□□□□ 0.15
UBXN8-207ENST00000615729 SLAIN2Q9P270 581 aa15.98■□□□□ 0.15
UBXN8-207ENST00000615729 CHRDL2Q6WN34 429 aa15.97■□□□□ 0.15
UBXN8-207ENST00000615729 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.15
UBXN8-207ENST00000615729 PRDM15P57071 1507 aaPredicted RBP15.97■□□□□ 0.15
UBXN8-207ENST00000615729 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
UBXN8-207ENST00000615729 XIRP1Q702N8 1843 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms