RNA–Protein interactions for RNA: ENST00000615729.4

UBXN8-207, Transcript of UBX domain protein 8, humanhuman

TSL 1 (best) BASIC

Gene UBXN8, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-207ENST00000615729 AEBP2Q6ZN18 517 aaPredicted RBP28.5■■■□□ 2.15
UBXN8-207ENST00000615729 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
UBXN8-207ENST00000615729 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
UBXN8-207ENST00000615729 SENP3Q9H4L4 574 aaPredicted RBP24.37■■□□□ 1.49
UBXN8-207ENST00000615729 PHF23Q9BUL5 403 aaPredicted RBP24.02■■□□□ 1.44
UBXN8-207ENST00000615729 ABCC9O60706 1549 aa23.64■■□□□ 1.38
UBXN8-207ENST00000615729 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
UBXN8-207ENST00000615729 FOXD1Q16676 465 aa22.76■■□□□ 1.23
UBXN8-207ENST00000615729 DNAJC5BQ9UF47 199 aa22.69■■□□□ 1.22
UBXN8-207ENST00000615729 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
UBXN8-207ENST00000615729 NACADO15069 1562 aa22.12■■□□□ 1.13
UBXN8-207ENST00000615729 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
UBXN8-207ENST00000615729 DCAF8L2P0C7V8 631 aa21.8■■□□□ 1.08
UBXN8-207ENST00000615729 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
UBXN8-207ENST00000615729 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
UBXN8-207ENST00000615729 UNC13AQ9UPW8 1703 aa21.61■■□□□ 1.05
UBXN8-207ENST00000615729 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
UBXN8-207ENST00000615729 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
UBXN8-207ENST00000615729 MSH5O43196 834 aa21.44■■□□□ 1.02
UBXN8-207ENST00000615729 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
UBXN8-207ENST00000615729 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
UBXN8-207ENST00000615729 DNAJC5Q9H3Z4 198 aa21.3■■□□□ 1
UBXN8-207ENST00000615729 DCAF1Q9Y4B6 1507 aa21.27■■□□□ 1
UBXN8-207ENST00000615729 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
UBXN8-207ENST00000615729 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
UBXN8-207ENST00000615729 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
UBXN8-207ENST00000615729 PIAS4Q8N2W9 510 aaPredicted RBP21.14■□□□□ 0.97
UBXN8-207ENST00000615729 PPP6R1Q9UPN7 881 aa21.03■□□□□ 0.96
UBXN8-207ENST00000615729 SCRIBQ14160 1630 aa20.99■□□□□ 0.95
UBXN8-207ENST00000615729 ADRA2BP18089 450 aa20.91■□□□□ 0.94
UBXN8-207ENST00000615729 CUX2O14529 1486 aa20.7■□□□□ 0.9
UBXN8-207ENST00000615729 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
UBXN8-207ENST00000615729 ERCC6Q03468 1493 aa20.48■□□□□ 0.87
UBXN8-207ENST00000615729 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
UBXN8-207ENST00000615729 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
UBXN8-207ENST00000615729 SMARCA2P51531 1590 aa20.21■□□□□ 0.83
UBXN8-207ENST00000615729 NESP48681 1621 aa20.15■□□□□ 0.82
UBXN8-207ENST00000615729 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
UBXN8-207ENST00000615729 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
UBXN8-207ENST00000615729 BAZ1BQ9UIG0 1483 aaKnown RBP20.03■□□□□ 0.8
UBXN8-207ENST00000615729 LAMC3Q9Y6N6 1575 aa20.01■□□□□ 0.79
UBXN8-207ENST00000615729 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
UBXN8-207ENST00000615729 PDS5BQ9NTI5 1447 aa19.99■□□□□ 0.79
UBXN8-207ENST00000615729 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
UBXN8-207ENST00000615729 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
UBXN8-207ENST00000615729 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
UBXN8-207ENST00000615729 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
UBXN8-207ENST00000615729 KIF21AQ7Z4S6 1674 aa19.77■□□□□ 0.76
UBXN8-207ENST00000615729 WDR62O43379 1518 aa19.74■□□□□ 0.75
UBXN8-207ENST00000615729 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
UBXN8-207ENST00000615729 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
UBXN8-207ENST00000615729 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
UBXN8-207ENST00000615729 FANCD2Q9BXW9 1451 aa19.53■□□□□ 0.72
UBXN8-207ENST00000615729 CFTRP13569 1480 aa19.48■□□□□ 0.71
UBXN8-207ENST00000615729 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
UBXN8-207ENST00000615729 WIZO95785 1651 aa19.36■□□□□ 0.69
UBXN8-207ENST00000615729 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
UBXN8-207ENST00000615729 RIMBP3CA6NJZ7 1639 aa19.32■□□□□ 0.68
UBXN8-207ENST00000615729 RIMBP3BA6NNM3 1639 aa19.32■□□□□ 0.68
UBXN8-207ENST00000615729 RIMBP3Q9UFD9 1639 aa19.32■□□□□ 0.68
UBXN8-207ENST00000615729 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
UBXN8-207ENST00000615729 ARHGEF11O15085 1522 aa19.28■□□□□ 0.68
UBXN8-207ENST00000615729 IFT140Q96RY7 1462 aa19.27■□□□□ 0.67
UBXN8-207ENST00000615729 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
UBXN8-207ENST00000615729 RSF1Q96T23 1441 aaPredicted RBP19.21■□□□□ 0.67
UBXN8-207ENST00000615729 TOP2AP11388 1531 aaKnown RBP19.2■□□□□ 0.66
UBXN8-207ENST00000615729 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
UBXN8-207ENST00000615729 SCAF1Q9H7N4 1312 aaKnown RBP19.17■□□□□ 0.66
UBXN8-207ENST00000615729 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
UBXN8-207ENST00000615729 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
UBXN8-207ENST00000615729 TOPBP1Q92547 1522 aa19.09■□□□□ 0.65
UBXN8-207ENST00000615729 ARAP1Q96P48 1450 aa19.06■□□□□ 0.64
UBXN8-207ENST00000615729 EIF4G3O43432 1585 aaKnown RBP19.01■□□□□ 0.63
UBXN8-207ENST00000615729 CCDC88BA6NC98 1476 aa19■□□□□ 0.63
UBXN8-207ENST00000615729 PRDM2Q13029 1718 aa19■□□□□ 0.63
UBXN8-207ENST00000615729 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.632e-6■■■■■ 26.9
UBXN8-207ENST00000615729 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
UBXN8-207ENST00000615729 FBLN2P98095 1184 aa18.94■□□□□ 0.62
UBXN8-207ENST00000615729 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
UBXN8-207ENST00000615729 CHD1O14646 1710 aa18.88■□□□□ 0.61
UBXN8-207ENST00000615729 POLA1P09884 1462 aaPredicted RBP18.87■□□□□ 0.61
UBXN8-207ENST00000615729 SOGA1O94964 1423 aa18.82■□□□□ 0.6
UBXN8-207ENST00000615729 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
UBXN8-207ENST00000615729 CLASP1Q7Z460 1538 aa18.81■□□□□ 0.6
UBXN8-207ENST00000615729 CHMP7Q8WUX9 453 aaPredicted RBP18.8■□□□□ 0.6
UBXN8-207ENST00000615729 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
UBXN8-207ENST00000615729 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.59
UBXN8-207ENST00000615729 RAD54L2Q9Y4B4 1467 aa18.77■□□□□ 0.59
UBXN8-207ENST00000615729 SNAPC4Q5SXM2 1469 aa18.76■□□□□ 0.59
UBXN8-207ENST00000615729 SYNJ1O43426 1573 aa18.75■□□□□ 0.59
UBXN8-207ENST00000615729 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
UBXN8-207ENST00000615729 GRIN2BQ13224 1484 aa18.71■□□□□ 0.59
UBXN8-207ENST00000615729 GAPVD1Q14C86 1478 aa18.67■□□□□ 0.58
UBXN8-207ENST00000615729 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
UBXN8-207ENST00000615729 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.56
UBXN8-207ENST00000615729 CUX1P39880 1505 aa18.55■□□□□ 0.56
UBXN8-207ENST00000615729 PPP4R3CPQ6ZMV5 832 aa18.54■□□□□ 0.56
UBXN8-207ENST00000615729 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
UBXN8-207ENST00000615729 HOXD11P31277 338 aaPredicted RBP18.46■□□□□ 0.55
UBXN8-207ENST00000615729 NUP160Q12769 1436 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms