RNA–Protein interactions for RNA: ENST00000614402.4

PMPCA-208, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-208ENST00000614402 MAST1Q9Y2H9 1570 aa32.32■■■□□ 2.77
PMPCA-208ENST00000614402 TCOF1Q13428 1488 aaKnown RBP32.31■■■□□ 2.76
PMPCA-208ENST00000614402 MIA2Q96PC5 1412 aa32.29■■■□□ 2.76
PMPCA-208ENST00000614402 A2ML1A8K2U0 1454 aa32.29■■■□□ 2.76
PMPCA-208ENST00000614402 PZPP20742 1482 aa32.29■■■□□ 2.76
PMPCA-208ENST00000614402 MYOM3Q5VTT5 1437 aa32.28■■■□□ 2.76
PMPCA-208ENST00000614402 TSPY4P0CV99 314 aa32.28■■■□□ 2.76
PMPCA-208ENST00000614402 TSPY10P0CW01 314 aa32.28■■■□□ 2.76
PMPCA-208ENST00000614402 NCKAP5LQ9HCH0 1330 aa32.27■■■□□ 2.76
PMPCA-208ENST00000614402 DNMT1P26358 1616 aaKnown RBP32.26■■■□□ 2.76
PMPCA-208ENST00000614402 PKD2Q13563 968 aa32.25■■■□□ 2.75
PMPCA-208ENST00000614402 RNF17Q9BXT8 1623 aaKnown RBP32.25■■■□□ 2.75
PMPCA-208ENST00000614402 IQSEC2Q5JU85 1478 aa32.24■■■□□ 2.75
PMPCA-208ENST00000614402 TNRQ92752 1358 aa32.21■■■□□ 2.75
PMPCA-208ENST00000614402 FBXO31Q5XUX0 539 aaPredicted RBP32.21■■■□□ 2.75
PMPCA-208ENST00000614402 WASHC2CQ9Y4E1 1318 aa32.21■■■□□ 2.75
PMPCA-208ENST00000614402 EIF2AK4Q9P2K8 1649 aaKnown RBP32.19■■■□□ 2.74
PMPCA-208ENST00000614402 ZC3H13Q5T200 1668 aaKnown RBP32.15■■■□□ 2.74
PMPCA-208ENST00000614402 ABCC3O15438 1527 aa32.15■■■□□ 2.74
PMPCA-208ENST00000614402 MROH1Q8NDA8 1641 aa32.15■■■□□ 2.74
PMPCA-208ENST00000614402 ZNF335Q9H4Z2 1342 aaPredicted RBP32.14■■■□□ 2.74
PMPCA-208ENST00000614402 POLR1AO95602 1720 aaPredicted RBP32.12■■■□□ 2.73
PMPCA-208ENST00000614402 NEURL4Q96JN8 1562 aa32.11■■■□□ 2.73
PMPCA-208ENST00000614402 NLRP1Q9C000 1473 aa32.1■■■□□ 2.73
PMPCA-208ENST00000614402 CROCC2H7BZ55 1655 aa32.1■■■□□ 2.73
PMPCA-208ENST00000614402 DUOX2Q9NRD8 1548 aa32.1■■■□□ 2.73
PMPCA-208ENST00000614402 SHANK2Q9UPX8 1470 aa32.1■■■□□ 2.73
PMPCA-208ENST00000614402 PTPN23Q9H3S7 1636 aa32.08■■■□□ 2.73
PMPCA-208ENST00000614402 SPATA31D1Q6ZQQ2 1576 aa32.07■■■□□ 2.72
PMPCA-208ENST00000614402 ABCC5O15440 1437 aa32.06■■■□□ 2.72
PMPCA-208ENST00000614402 UGGT1Q9NYU2 1555 aa32.03■■■□□ 2.72
PMPCA-208ENST00000614402 CEP152O94986 1710 aa32.01■■■□□ 2.72
PMPCA-208ENST00000614402 APLP2Q06481 763 aa32.01■■■□□ 2.71
PMPCA-208ENST00000614402 KIF15Q9NS87 1388 aa32.01■■■□□ 2.71
PMPCA-208ENST00000614402 ERVK-7P63135 1459 aa32.01■■■□□ 2.71
PMPCA-208ENST00000614402 FGD6Q6ZV73 1430 aa32■■■□□ 2.71
PMPCA-208ENST00000614402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32■■■□□ 2.71
PMPCA-208ENST00000614402 PRDM15P57071 1507 aaPredicted RBP32■■■□□ 2.71
PMPCA-208ENST00000614402 DAPK1P53355 1430 aa31.99■■■□□ 2.71
PMPCA-208ENST00000614402 ERBINQ96RT1 1412 aa31.99■■■□□ 2.71
PMPCA-208ENST00000614402 DEPDC5O75140 1603 aa31.98■■■□□ 2.71
PMPCA-208ENST00000614402 THEMISQ8N1K5 641 aaPredicted RBP31.97■■■□□ 2.71
PMPCA-208ENST00000614402 MED14O60244 1454 aa31.96■■■□□ 2.71
PMPCA-208ENST00000614402 ANKLE2Q86XL3 938 aa31.94■■■□□ 2.7
PMPCA-208ENST00000614402 ARHGAP31Q2M1Z3 1444 aa31.91■■■□□ 2.7
PMPCA-208ENST00000614402 CPS1P31327 1500 aa31.9■■■□□ 2.7
PMPCA-208ENST00000614402 VWDEQ8N2E2 1590 aa31.9■■■□□ 2.7
PMPCA-208ENST00000614402 RRP7BPQ9NSQ0 103 aa31.9■■■□□ 2.7
PMPCA-208ENST00000614402 NPHP4O75161 1426 aaPredicted RBP31.89■■■□□ 2.7
PMPCA-208ENST00000614402 UBAP1LF5GYI3 381 aa31.87■■■□□ 2.69
PMPCA-208ENST00000614402 UBR1Q8IWV7 1749 aa31.86■■■□□ 2.69
PMPCA-208ENST00000614402 IQGAP1P46940 1657 aa31.86■■■□□ 2.69
PMPCA-208ENST00000614402 CFAP65Q6ZU64 1925 aaKnown RBP31.83■■■□□ 2.69
PMPCA-208ENST00000614402 ANKRD30AQ9BXX3 1397 aa31.82■■■□□ 2.69
PMPCA-208ENST00000614402 DISP3Q9P2K9 1392 aa31.81■■■□□ 2.68
PMPCA-208ENST00000614402 LMTK2Q8IWU2 1503 aa31.8■■■□□ 2.68
PMPCA-208ENST00000614402 ADGRL2O95490 1459 aa31.78■■■□□ 2.68
PMPCA-208ENST00000614402 ARHGAP23Q9P227 1491 aa31.77■■■□□ 2.68
PMPCA-208ENST00000614402 SLIT1O75093 1534 aa31.76■■■□□ 2.68
PMPCA-208ENST00000614402 CHIC2Q9UKJ5 165 aa31.76■■■□□ 2.67
PMPCA-208ENST00000614402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.75■■■□□ 2.673e-6■■■■□ 20.4
PMPCA-208ENST00000614402 KANK1Q14678 1352 aa31.75■■■□□ 2.67
PMPCA-208ENST00000614402 SCAF11Q99590 1463 aaKnown RBP31.73■■■□□ 2.67
PMPCA-208ENST00000614402 STRCP1A6NGW2 1772 aa31.73■■■□□ 2.67
PMPCA-208ENST00000614402 PIK3C2BO00750 1634 aa31.71■■■□□ 2.67
PMPCA-208ENST00000614402 EFCAB6Q5THR3 1501 aa31.69■■■□□ 2.66
PMPCA-208ENST00000614402 ALKQ9UM73 1620 aa31.68■■■□□ 2.66
PMPCA-208ENST00000614402 ILDR2Q71H61 639 aa31.68■■■□□ 2.66
PMPCA-208ENST00000614402 KDM5AP29375 1690 aaKnown RBP31.67■■■□□ 2.66
PMPCA-208ENST00000614402 LTKP29376 864 aa31.67■■■□□ 2.66
PMPCA-208ENST00000614402 SYNMO15061 1565 aa31.67■■■□□ 2.66
PMPCA-208ENST00000614402 TOM1O60784 492 aa31.65■■■□□ 2.66
PMPCA-208ENST00000614402 LRRC7Q96NW7 1537 aa31.65■■■□□ 2.66
PMPCA-208ENST00000614402 FAM50AQ14320 339 aaKnown RBP31.64■■■□□ 2.66
PMPCA-208ENST00000614402 NOS1P29475 1434 aa31.63■■■□□ 2.65
PMPCA-208ENST00000614402 TMEM2Q9UHN6 1383 aa31.62■■■□□ 2.65
PMPCA-208ENST00000614402 ANKRD50Q9ULJ7 1429 aa31.61■■■□□ 2.65
PMPCA-208ENST00000614402 TXNDC2Q86VQ3 553 aa31.61■■■□□ 2.65
PMPCA-208ENST00000614402 PIP4K2BP78356 416 aa31.59■■■□□ 2.65
PMPCA-208ENST00000614402 IDI1Q13907 227 aa31.58■■■□□ 2.65
PMPCA-208ENST00000614402 SCAF1Q9H7N4 1312 aaKnown RBP31.56■■■□□ 2.64
PMPCA-208ENST00000614402 HSPA1LP34931 641 aa31.56■■■□□ 2.64
PMPCA-208ENST00000614402 EID1Q9Y6B2 187 aa31.56■■■□□ 2.64
PMPCA-208ENST00000614402 RPRD2Q5VT52 1461 aaKnown RBP31.55■■■□□ 2.64
PMPCA-208ENST00000614402 ADGRB3O60242 1522 aa31.54■■■□□ 2.64
PMPCA-208ENST00000614402 TET3O43151 1660 aa31.52■■■□□ 2.64
PMPCA-208ENST00000614402 UNC13BO14795 1591 aa31.51■■■□□ 2.64
PMPCA-208ENST00000614402 STAG3Q9UJ98 1225 aa31.51■■■□□ 2.63
PMPCA-208ENST00000614402 XIRP1Q702N8 1843 aaKnown RBP31.48■■■□□ 2.63
PMPCA-208ENST00000614402 ROCK1Q13464 1354 aa31.47■■■□□ 2.63
PMPCA-208ENST00000614402 SLC52A1Q9NWF4 448 aa31.47■■■□□ 2.63
PMPCA-208ENST00000614402 GCC2Q8IWJ2 1684 aa31.46■■■□□ 2.63
PMPCA-208ENST00000614402 SOCS7O14512 581 aa31.45■■■□□ 2.63
PMPCA-208ENST00000614402 MED1Q15648 1581 aaPredicted RBP31.43■■■□□ 2.62
PMPCA-208ENST00000614402 ZFYVE9O95405 1425 aa31.38■■■□□ 2.61
PMPCA-208ENST00000614402 IQGAP3Q86VI3 1631 aa31.38■■■□□ 2.61
PMPCA-208ENST00000614402 E9PCH4 1651 aa31.38■■■□□ 2.61
PMPCA-208ENST00000614402 TMEM131LA2VDJ0 1609 aa31.37■■■□□ 2.61
PMPCA-208ENST00000614402 MYO5BQ9ULV0 1848 aa31.37■■■□□ 2.61
PMPCA-208ENST00000614402 NWD1Q149M9 1564 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms