RNA–Protein interactions for RNA: ENST00000614402.4

PMPCA-208, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-208ENST00000614402 NISCHQ9Y2I1 1504 aa51.22■■■■■ 5.79
PMPCA-208ENST00000614402 CCDC180Q9P1Z9 1646 aa45.95■■■■■ 4.95
PMPCA-208ENST00000614402 ABCC9O60706 1549 aa45.76■■■■■ 4.92
PMPCA-208ENST00000614402 RB1CC1Q8TDY2 1594 aa43.64■■■■■ 4.58
PMPCA-208ENST00000614402 NACADO15069 1562 aa43.39■■■■■ 4.54
PMPCA-208ENST00000614402 DCAF8L2P0C7V8 631 aa42.97■■■■■ 4.47
PMPCA-208ENST00000614402 MYO15BQ96JP2 1530 aa42.88■■■■■ 4.46
PMPCA-208ENST00000614402 DNAJC5BQ9UF47 199 aa42.83■■■■■ 4.45
PMPCA-208ENST00000614402 UNC13AQ9UPW8 1703 aa42.69■■■■■ 4.42
PMPCA-208ENST00000614402 PABPN1Q86U42 306 aaKnown RBP eCLIP42.57■■■■■ 4.41
PMPCA-208ENST00000614402 ZCCHC6Q5VYS8 1495 aaKnown RBP42.5■■■■■ 4.39
PMPCA-208ENST00000614402 BICRAQ9NZM4 1560 aa42.42■■■■■ 4.38
PMPCA-208ENST00000614402 DCAF1Q9Y4B6 1507 aa42.36■■■■■ 4.37
PMPCA-208ENST00000614402 SHROOM4Q9ULL8 1493 aa41.88■■■■■ 4.29
PMPCA-208ENST00000614402 SCRIBQ14160 1630 aa41.81■■■■■ 4.28
PMPCA-208ENST00000614402 CC2D2AQ9P2K1 1620 aa41.38■■■■■ 4.21
PMPCA-208ENST00000614402 EIF4G1Q04637 1599 aaKnown RBP41.34■■■■■ 4.21
PMPCA-208ENST00000614402 CECR2Q9BXF3 1484 aa41.22■■■■■ 4.19
PMPCA-208ENST00000614402 NCAPD3P42695 1498 aa40.06■■■■■ 4
PMPCA-208ENST00000614402 ATAD2BQ9ULI0 1458 aa39.94■■■■□ 3.98
PMPCA-208ENST00000614402 SMARCA4P51532 1647 aa39.94■■■■□ 3.98
PMPCA-208ENST00000614402 SMARCA2P51531 1590 aa39.83■■■■□ 3.97
PMPCA-208ENST00000614402 HMGXB3Q12766 1538 aa39.79■■■■□ 3.96
PMPCA-208ENST00000614402 BAZ1AQ9NRL2 1556 aaPredicted RBP39.74■■■■□ 3.95
PMPCA-208ENST00000614402 PEG3Q9GZU2 1588 aa39.6■■■■□ 3.93
PMPCA-208ENST00000614402 BAZ1BQ9UIG0 1483 aaKnown RBP39.53■■■■□ 3.92
PMPCA-208ENST00000614402 ERCC6Q03468 1493 aa39.48■■■■□ 3.91
PMPCA-208ENST00000614402 MROH2BQ7Z745 1585 aa39.46■■■■□ 3.91
PMPCA-208ENST00000614402 CUX2O14529 1486 aa39.44■■■■□ 3.9
PMPCA-208ENST00000614402 NESP48681 1621 aa39.36■■■■□ 3.89
PMPCA-208ENST00000614402 DNAJC5Q9H3Z4 198 aa39.24■■■■□ 3.87
PMPCA-208ENST00000614402 LAMC3Q9Y6N6 1575 aa39.13■■■■□ 3.85
PMPCA-208ENST00000614402 THOC2Q8NI27 1593 aaKnown RBP39■■■■□ 3.83
PMPCA-208ENST00000614402 WIZO95785 1651 aa38.98■■■■□ 3.83
PMPCA-208ENST00000614402 KIF21AQ7Z4S6 1674 aa38.87■■■■□ 3.81
PMPCA-208ENST00000614402 PDS5BQ9NTI5 1447 aa38.86■■■■□ 3.81
PMPCA-208ENST00000614402 CADPSQ9ULU8 1353 aa38.81■■■■□ 3.8
PMPCA-208ENST00000614402 RSF1Q96T23 1441 aaPredicted RBP38.67■■■■□ 3.78
PMPCA-208ENST00000614402 MRC2Q9UBG0 1479 aa38.54■■■■□ 3.76
PMPCA-208ENST00000614402 TOP2AP11388 1531 aaKnown RBP38.52■■■■□ 3.76
PMPCA-208ENST00000614402 WDR62O43379 1518 aa38.49■■■■□ 3.75
PMPCA-208ENST00000614402 CFTRP13569 1480 aa38.43■■■■□ 3.74
PMPCA-208ENST00000614402 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
PMPCA-208ENST00000614402 FANCD2Q9BXW9 1451 aa38.37■■■■□ 3.73
PMPCA-208ENST00000614402 URB2Q14146 1524 aaKnown RBP38.07■■■■□ 3.69
PMPCA-208ENST00000614402 PRDM2Q13029 1718 aa38.07■■■■□ 3.68
PMPCA-208ENST00000614402 CCDC88BA6NC98 1476 aa38.05■■■■□ 3.68
PMPCA-208ENST00000614402 TOPBP1Q92547 1522 aa37.67■■■■□ 3.62
PMPCA-208ENST00000614402 IFT140Q96RY7 1462 aa37.64■■■■□ 3.62
PMPCA-208ENST00000614402 ABCC8Q09428 1581 aa37.58■■■■□ 3.61
PMPCA-208ENST00000614402 ZNF608Q9ULD9 1512 aaPredicted RBP37.57■■■■□ 3.61
PMPCA-208ENST00000614402 OSCARQ8IYS5 282 aa37.57■■■■□ 3.6
PMPCA-208ENST00000614402 DNMBPQ6XZF7 1577 aa37.55■■■■□ 3.6
PMPCA-208ENST00000614402 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
PMPCA-208ENST00000614402 EIF4G3O43432 1585 aaKnown RBP37.39■■■■□ 3.58
PMPCA-208ENST00000614402 TARBP1Q13395 1621 aaKnown RBP37.36■■■■□ 3.57
PMPCA-208ENST00000614402 POLA1P09884 1462 aaPredicted RBP37.3■■■■□ 3.56
PMPCA-208ENST00000614402 AQRO60306 1485 aaKnown RBP eCLIP37.21■■■■□ 3.551e-7■■■□□ 17.5
PMPCA-208ENST00000614402 RIMBP3CA6NJZ7 1639 aa37.14■■■■□ 3.54
PMPCA-208ENST00000614402 RIMBP3BA6NNM3 1639 aa37.14■■■■□ 3.54
PMPCA-208ENST00000614402 RIMBP3Q9UFD9 1639 aa37.14■■■■□ 3.54
PMPCA-208ENST00000614402 RAD54L2Q9Y4B4 1467 aa37.13■■■■□ 3.53
PMPCA-208ENST00000614402 CUX1P39880 1505 aa37.08■■■■□ 3.53
PMPCA-208ENST00000614402 SOGA1O94964 1423 aa37.08■■■■□ 3.53
PMPCA-208ENST00000614402 CHD1O14646 1710 aa37.07■■■■□ 3.53
PMPCA-208ENST00000614402 FGD5Q6ZNL6 1462 aa37.07■■■■□ 3.52
PMPCA-208ENST00000614402 ARHGEF11O15085 1522 aa37.05■■■■□ 3.52
PMPCA-208ENST00000614402 WDR97A6NE52 1622 aa37■■■■□ 3.51
PMPCA-208ENST00000614402 TDRD9Q8NDG6 1382 aaKnown RBP36.99■■■■□ 3.51
PMPCA-208ENST00000614402 SUPT5HO00267 1087 aaKnown RBP36.89■■■■□ 3.5
PMPCA-208ENST00000614402 SNAPC4Q5SXM2 1469 aa36.86■■■■□ 3.49
PMPCA-208ENST00000614402 FBLN2P98095 1184 aa36.84■■■■□ 3.49
PMPCA-208ENST00000614402 MAGI1Q96QZ7 1491 aaPredicted RBP36.79■■■■□ 3.48
PMPCA-208ENST00000614402 GRIN2BQ13224 1484 aa36.77■■■■□ 3.48
PMPCA-208ENST00000614402 ARAP1Q96P48 1450 aa36.7■■■■□ 3.47
PMPCA-208ENST00000614402 CLASP1Q7Z460 1538 aa36.69■■■■□ 3.46
PMPCA-208ENST00000614402 ABCA10Q8WWZ4 1543 aa36.68■■■■□ 3.46
PMPCA-208ENST00000614402 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
PMPCA-208ENST00000614402 CYB5RLQ6IPT4 315 aa36.66■■■■□ 3.46
PMPCA-208ENST00000614402 SYNJ2O15056 1496 aa36.66■■■■□ 3.46
PMPCA-208ENST00000614402 GAPVD1Q14C86 1478 aa36.66■■■■□ 3.46
PMPCA-208ENST00000614402 ABCA5Q8WWZ7 1642 aa36.64■■■■□ 3.46
PMPCA-208ENST00000614402 SYNJ1O43426 1573 aa36.63■■■■□ 3.45
PMPCA-208ENST00000614402 CHMP7Q8WUX9 453 aaPredicted RBP36.63■■■■□ 3.45
PMPCA-208ENST00000614402 BIVM-ERCC5R4GMW8 1640 aa36.53■■■■□ 3.44
PMPCA-208ENST00000614402 TOP2BQ02880 1626 aa36.51■■■■□ 3.43
PMPCA-208ENST00000614402 WRNQ14191 1432 aaPredicted RBP eCLIP36.5■■■■□ 3.43
PMPCA-208ENST00000614402 ADAMTS12P58397 1594 aa36.34■■■■□ 3.41
PMPCA-208ENST00000614402 GRIN2AQ12879 1464 aa36.32■■■■□ 3.41
PMPCA-208ENST00000614402 NUP160Q12769 1436 aa36.22■■■■□ 3.39
PMPCA-208ENST00000614402 ERICH3Q5RHP9 1530 aa36.22■■■■□ 3.39
PMPCA-208ENST00000614402 CEP170Q5SW79 1584 aa36.2■■■■□ 3.39
PMPCA-208ENST00000614402 FHAD1B1AJZ9 1412 aa36.2■■■■□ 3.39
PMPCA-208ENST00000614402 TRHP20396 242 aaPredicted RBP36.17■■■■□ 3.38
PMPCA-208ENST00000614402 ERCC6L2Q5T890 1561 aa36.1■■■■□ 3.37
PMPCA-208ENST00000614402 SHROOM2Q13796 1616 aa36.07■■■■□ 3.36
PMPCA-208ENST00000614402 RUSC2Q8N2Y8 1516 aa35.84■■■■□ 3.33
PMPCA-208ENST00000614402 PRG4Q92954 1404 aaPredicted RBP35.79■■■■□ 3.32
PMPCA-208ENST00000614402 KIF27Q86VH2 1401 aa35.75■■■■□ 3.31
PMPCA-208ENST00000614402 JPH4Q96JJ6 628 aa35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms