RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 KDM5DQ9BY66 1539 aa27.79■■■□□ 2.04
TNFAIP3-207ENST00000614035 CAMSAP1Q5T5Y3 1602 aa27.79■■■□□ 2.04
TNFAIP3-207ENST00000614035 CEP170BQ9Y4F5 1589 aaPredicted RBP27.76■■■□□ 2.03
TNFAIP3-207ENST00000614035 APLP2Q06481 763 aa27.75■■■□□ 2.03
TNFAIP3-207ENST00000614035 PLA2R1Q13018 1463 aa27.73■■■□□ 2.03
TNFAIP3-207ENST00000614035 PZPP20742 1482 aa27.72■■■□□ 2.03
TNFAIP3-207ENST00000614035 RNF17Q9BXT8 1623 aaKnown RBP27.71■■■□□ 2.03
TNFAIP3-207ENST00000614035 WASHC2CQ9Y4E1 1318 aa27.71■■■□□ 2.03
TNFAIP3-207ENST00000614035 EIF2AK4Q9P2K8 1649 aaKnown RBP27.69■■■□□ 2.02
TNFAIP3-207ENST00000614035 A2ML1A8K2U0 1454 aa27.68■■■□□ 2.02
TNFAIP3-207ENST00000614035 PTPN23Q9H3S7 1636 aa27.67■■■□□ 2.02
TNFAIP3-207ENST00000614035 TCOF1Q13428 1488 aaKnown RBP27.67■■■□□ 2.02
TNFAIP3-207ENST00000614035 SHANK2Q9UPX8 1470 aa27.66■■■□□ 2.02
TNFAIP3-207ENST00000614035 TNRQ92752 1358 aa27.65■■■□□ 2.02
TNFAIP3-207ENST00000614035 FBXO31Q5XUX0 539 aaPredicted RBP27.65■■■□□ 2.02
TNFAIP3-207ENST00000614035 DNMT1P26358 1616 aaKnown RBP27.65■■■□□ 2.02
TNFAIP3-207ENST00000614035 CROCC2H7BZ55 1655 aa27.64■■■□□ 2.02
TNFAIP3-207ENST00000614035 DUOX2Q9NRD8 1548 aa27.64■■■□□ 2.02
TNFAIP3-207ENST00000614035 LTBP4Q8N2S1 1624 aa27.64■■■□□ 2.02
TNFAIP3-207ENST00000614035 PKD2Q13563 968 aa27.64■■■□□ 2.02
TNFAIP3-207ENST00000614035 ZC3H13Q5T200 1668 aaKnown RBP27.64■■■□□ 2.01
TNFAIP3-207ENST00000614035 NCKAP5LQ9HCH0 1330 aa27.64■■■□□ 2.01
TNFAIP3-207ENST00000614035 ABCC5O15440 1437 aa27.64■■■□□ 2.01
TNFAIP3-207ENST00000614035 FGD6Q6ZV73 1430 aa27.63■■■□□ 2.01
TNFAIP3-207ENST00000614035 ABCC3O15438 1527 aa27.62■■■□□ 2.01
TNFAIP3-207ENST00000614035 MROH1Q8NDA8 1641 aa27.61■■■□□ 2.01
TNFAIP3-207ENST00000614035 DAPK1P53355 1430 aa27.58■■■□□ 2.01
TNFAIP3-207ENST00000614035 KIF15Q9NS87 1388 aa27.58■■■□□ 2.01
TNFAIP3-207ENST00000614035 NLRP1Q9C000 1473 aa27.56■■■□□ 2
TNFAIP3-207ENST00000614035 ERBINQ96RT1 1412 aa27.56■■■□□ 2
TNFAIP3-207ENST00000614035 IQSEC2Q5JU85 1478 aa27.54■■■□□ 2
TNFAIP3-207ENST00000614035 SPATA31D1Q6ZQQ2 1576 aa27.53■■■□□ 2
TNFAIP3-207ENST00000614035 PRDM15P57071 1507 aaPredicted RBP27.52■■■□□ 2
TNFAIP3-207ENST00000614035 POLR1AO95602 1720 aaPredicted RBP27.51■■□□□ 1.99
TNFAIP3-207ENST00000614035 CEP152O94986 1710 aa27.5■■□□□ 1.99
TNFAIP3-207ENST00000614035 RRP7BPQ9NSQ0 103 aa27.5■■□□□ 1.99
TNFAIP3-207ENST00000614035 ERVK-7P63135 1459 aa27.5■■□□□ 1.99
TNFAIP3-207ENST00000614035 UGGT1Q9NYU2 1555 aa27.49■■□□□ 1.99
TNFAIP3-207ENST00000614035 ZNF335Q9H4Z2 1342 aaPredicted RBP27.48■■□□□ 1.99
TNFAIP3-207ENST00000614035 NEURL4Q96JN8 1562 aa27.48■■□□□ 1.99
TNFAIP3-207ENST00000614035 DEPDC5O75140 1603 aa27.47■■□□□ 1.99
TNFAIP3-207ENST00000614035 THEMISQ8N1K5 641 aaPredicted RBP27.47■■□□□ 1.99
TNFAIP3-207ENST00000614035 ANKRD30AQ9BXX3 1397 aa27.45■■□□□ 1.99
TNFAIP3-207ENST00000614035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.45■■□□□ 1.98
TNFAIP3-207ENST00000614035 ARHGAP31Q2M1Z3 1444 aa27.44■■□□□ 1.98
TNFAIP3-207ENST00000614035 ANKLE2Q86XL3 938 aa27.41■■□□□ 1.98
TNFAIP3-207ENST00000614035 ADGRL2O95490 1459 aa27.41■■□□□ 1.98
TNFAIP3-207ENST00000614035 CHIC2Q9UKJ5 165 aa27.4■■□□□ 1.98
TNFAIP3-207ENST00000614035 MED14O60244 1454 aa27.39■■□□□ 1.98
TNFAIP3-207ENST00000614035 KANK1Q14678 1352 aa27.37■■□□□ 1.97
TNFAIP3-207ENST00000614035 CFAP65Q6ZU64 1925 aaKnown RBP27.37■■□□□ 1.97
TNFAIP3-207ENST00000614035 VWDEQ8N2E2 1590 aa27.36■■□□□ 1.97
TNFAIP3-207ENST00000614035 LMTK2Q8IWU2 1503 aa27.36■■□□□ 1.97
TNFAIP3-207ENST00000614035 FAM50AQ14320 339 aaKnown RBP27.35■■□□□ 1.97
TNFAIP3-207ENST00000614035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.35■■□□□ 1.978e-9■□□□□ 9.6
TNFAIP3-207ENST00000614035 UBR1Q8IWV7 1749 aa27.34■■□□□ 1.97
TNFAIP3-207ENST00000614035 NPHP4O75161 1426 aaPredicted RBP27.34■■□□□ 1.97
TNFAIP3-207ENST00000614035 CPS1P31327 1500 aa27.31■■□□□ 1.96
TNFAIP3-207ENST00000614035 IQGAP1P46940 1657 aa27.3■■□□□ 1.96
TNFAIP3-207ENST00000614035 ANKRD50Q9ULJ7 1429 aa27.27■■□□□ 1.96
TNFAIP3-207ENST00000614035 SLIT1O75093 1534 aa27.26■■□□□ 1.95
TNFAIP3-207ENST00000614035 EFCAB6Q5THR3 1501 aa27.26■■□□□ 1.95
TNFAIP3-207ENST00000614035 ARHGAP23Q9P227 1491 aa27.26■■□□□ 1.95
TNFAIP3-207ENST00000614035 UBAP1LF5GYI3 381 aa27.24■■□□□ 1.95
TNFAIP3-207ENST00000614035 SCAF11Q99590 1463 aaKnown RBP27.23■■□□□ 1.95
TNFAIP3-207ENST00000614035 PIK3C2BO00750 1634 aa27.23■■□□□ 1.95
TNFAIP3-207ENST00000614035 KDM5AP29375 1690 aaKnown RBP27.22■■□□□ 1.95
TNFAIP3-207ENST00000614035 NOS1P29475 1434 aa27.2■■□□□ 1.95
TNFAIP3-207ENST00000614035 SYNMO15061 1565 aa27.2■■□□□ 1.94
TNFAIP3-207ENST00000614035 ROCK1Q13464 1354 aa27.18■■□□□ 1.94
TNFAIP3-207ENST00000614035 LTKP29376 864 aa27.17■■□□□ 1.94
TNFAIP3-207ENST00000614035 RPRD2Q5VT52 1461 aaKnown RBP27.17■■□□□ 1.94
TNFAIP3-207ENST00000614035 IDI1Q13907 227 aa27.16■■□□□ 1.94
TNFAIP3-207ENST00000614035 TXNDC2Q86VQ3 553 aa27.16■■□□□ 1.94
TNFAIP3-207ENST00000614035 TMEM2Q9UHN6 1383 aa27.15■■□□□ 1.94
TNFAIP3-207ENST00000614035 UNC13BO14795 1591 aa27.15■■□□□ 1.94
TNFAIP3-207ENST00000614035 STRCP1A6NGW2 1772 aa27.14■■□□□ 1.94
TNFAIP3-207ENST00000614035 TET3O43151 1660 aa27.14■■□□□ 1.94
TNFAIP3-207ENST00000614035 EID1Q9Y6B2 187 aa27.13■■□□□ 1.93
TNFAIP3-207ENST00000614035 STAG3Q9UJ98 1225 aa27.12■■□□□ 1.93
TNFAIP3-207ENST00000614035 SLC52A1Q9NWF4 448 aa27.11■■□□□ 1.93
TNFAIP3-207ENST00000614035 ADGRB3O60242 1522 aa27.1■■□□□ 1.93
TNFAIP3-207ENST00000614035 GCC2Q8IWJ2 1684 aa27.09■■□□□ 1.93
TNFAIP3-207ENST00000614035 TOM1O60784 492 aa27.09■■□□□ 1.93
TNFAIP3-207ENST00000614035 LRRC7Q96NW7 1537 aa27.09■■□□□ 1.93
TNFAIP3-207ENST00000614035 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
TNFAIP3-207ENST00000614035 DISP3Q9P2K9 1392 aa27.06■■□□□ 1.92
TNFAIP3-207ENST00000614035 ALKQ9UM73 1620 aa27.04■■□□□ 1.92
TNFAIP3-207ENST00000614035 IQGAP3Q86VI3 1631 aa27.04■■□□□ 1.92
TNFAIP3-207ENST00000614035 PIP4K2BP78356 416 aa27.01■■□□□ 1.91
TNFAIP3-207ENST00000614035 E9PCH4 1651 aa27■■□□□ 1.91
TNFAIP3-207ENST00000614035 ITGAEP38570 1179 aa26.99■■□□□ 1.91
TNFAIP3-207ENST00000614035 SCAF1Q9H7N4 1312 aaKnown RBP26.99■■□□□ 1.91
TNFAIP3-207ENST00000614035 TMEM131LA2VDJ0 1609 aa26.97■■□□□ 1.91
TNFAIP3-207ENST00000614035 RRBP1Q9P2E9 1410 aaKnown RBP26.96■■□□□ 1.91
TNFAIP3-207ENST00000614035 NUP155O75694 1391 aa26.96■■□□□ 1.91
TNFAIP3-207ENST00000614035 ZFYVE9O95405 1425 aa26.95■■□□□ 1.91
TNFAIP3-207ENST00000614035 HSPA1LP34931 641 aa26.95■■□□□ 1.9
TNFAIP3-207ENST00000614035 MYO5BQ9ULV0 1848 aa26.95■■□□□ 1.9
TNFAIP3-207ENST00000614035 XIRP1Q702N8 1843 aaKnown RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms