RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 MYO3AQ8NEV4 1616 aa27.12■■□□□ 1.93
PRKN-209ENST00000612485 CERKQ8TCT0 537 aa27.12■■□□□ 1.93
PRKN-209ENST00000612485 CAMSAP1Q5T5Y3 1602 aa27.11■■□□□ 1.93
PRKN-209ENST00000612485 ZNF142P52746 1687 aaPredicted RBP27.1■■□□□ 1.93
PRKN-209ENST00000612485 PTPN23Q9H3S7 1636 aa27.09■■□□□ 1.93
PRKN-209ENST00000612485 CEP170BQ9Y4F5 1589 aaPredicted RBP27.09■■□□□ 1.93
PRKN-209ENST00000612485 PZPP20742 1482 aa27.07■■□□□ 1.92
PRKN-209ENST00000612485 FGD6Q6ZV73 1430 aa27.06■■□□□ 1.92
PRKN-209ENST00000612485 SHANK2Q9UPX8 1470 aa27.06■■□□□ 1.92
PRKN-209ENST00000612485 EIF2AK4Q9P2K8 1649 aaKnown RBP27.05■■□□□ 1.92
PRKN-209ENST00000612485 RNF17Q9BXT8 1623 aaKnown RBP27.05■■□□□ 1.92
PRKN-209ENST00000612485 TNRQ92752 1358 aa27.04■■□□□ 1.92
PRKN-209ENST00000612485 ABCC5O15440 1437 aa27.04■■□□□ 1.92
PRKN-209ENST00000612485 PLA2R1Q13018 1463 aa27.04■■□□□ 1.92
PRKN-209ENST00000612485 DUOX2Q9NRD8 1548 aa27.04■■□□□ 1.92
PRKN-209ENST00000612485 A2ML1A8K2U0 1454 aa27.03■■□□□ 1.92
PRKN-209ENST00000612485 TCOF1Q13428 1488 aaKnown RBP27.03■■□□□ 1.92
PRKN-209ENST00000612485 FBXO31Q5XUX0 539 aaPredicted RBP27.02■■□□□ 1.92
PRKN-209ENST00000612485 PKD2Q13563 968 aa27.01■■□□□ 1.91
PRKN-209ENST00000612485 CROCC2H7BZ55 1655 aa27.01■■□□□ 1.91
PRKN-209ENST00000612485 DAPK1P53355 1430 aa27■■□□□ 1.91
PRKN-209ENST00000612485 NCKAP5LQ9HCH0 1330 aa27■■□□□ 1.91
PRKN-209ENST00000612485 KIF15Q9NS87 1388 aa26.99■■□□□ 1.91
PRKN-209ENST00000612485 ZC3H13Q5T200 1668 aaKnown RBP26.98■■□□□ 1.91
PRKN-209ENST00000612485 DNMT1P26358 1616 aaKnown RBP26.98■■□□□ 1.91
PRKN-209ENST00000612485 ABCC3O15438 1527 aa26.98■■□□□ 1.91
PRKN-209ENST00000612485 RRP7BPQ9NSQ0 103 aa26.96■■□□□ 1.91
PRKN-209ENST00000612485 ERBINQ96RT1 1412 aa26.96■■□□□ 1.91
PRKN-209ENST00000612485 MROH1Q8NDA8 1641 aa26.94■■□□□ 1.9
PRKN-209ENST00000612485 NLRP1Q9C000 1473 aa26.93■■□□□ 1.9
PRKN-209ENST00000612485 ANKRD30AQ9BXX3 1397 aa26.91■■□□□ 1.9
PRKN-209ENST00000612485 LTBP4Q8N2S1 1624 aa26.9■■□□□ 1.9
PRKN-209ENST00000612485 CHIC2Q9UKJ5 165 aa26.89■■□□□ 1.9
PRKN-209ENST00000612485 PRDM15P57071 1507 aaPredicted RBP26.87■■□□□ 1.89
PRKN-209ENST00000612485 THEMISQ8N1K5 641 aaPredicted RBP26.87■■□□□ 1.89
PRKN-209ENST00000612485 SPATA31D1Q6ZQQ2 1576 aa26.87■■□□□ 1.89
PRKN-209ENST00000612485 CEP152O94986 1710 aa26.86■■□□□ 1.89
PRKN-209ENST00000612485 FAM50AQ14320 339 aaKnown RBP26.86■■□□□ 1.89
PRKN-209ENST00000612485 ERVK-7P63135 1459 aa26.86■■□□□ 1.89
PRKN-209ENST00000612485 UGGT1Q9NYU2 1555 aa26.85■■□□□ 1.89
PRKN-209ENST00000612485 IQSEC2Q5JU85 1478 aa26.84■■□□□ 1.89
PRKN-209ENST00000612485 KANK1Q14678 1352 aa26.83■■□□□ 1.88
PRKN-209ENST00000612485 ANKLE2Q86XL3 938 aa26.82■■□□□ 1.88
PRKN-209ENST00000612485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.82■■□□□ 1.88
PRKN-209ENST00000612485 ZNF335Q9H4Z2 1342 aaPredicted RBP26.82■■□□□ 1.88
PRKN-209ENST00000612485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.82■■□□□ 1.88
PRKN-209ENST00000612485 ARHGAP31Q2M1Z3 1444 aa26.82■■□□□ 1.88
PRKN-209ENST00000612485 ADGRL2O95490 1459 aa26.81■■□□□ 1.88
PRKN-209ENST00000612485 DEPDC5O75140 1603 aa26.81■■□□□ 1.88
PRKN-209ENST00000612485 POLR1AO95602 1720 aaPredicted RBP26.81■■□□□ 1.88
PRKN-209ENST00000612485 NEURL4Q96JN8 1562 aa26.77■■□□□ 1.88
PRKN-209ENST00000612485 CFAP65Q6ZU64 1925 aaKnown RBP26.74■■□□□ 1.87
PRKN-209ENST00000612485 LMTK2Q8IWU2 1503 aa26.73■■□□□ 1.87
PRKN-209ENST00000612485 MED14O60244 1454 aa26.71■■□□□ 1.87
PRKN-209ENST00000612485 NPHP4O75161 1426 aaPredicted RBP26.71■■□□□ 1.87
PRKN-209ENST00000612485 VWDEQ8N2E2 1590 aa26.71■■□□□ 1.87
PRKN-209ENST00000612485 ANKRD50Q9ULJ7 1429 aa26.7■■□□□ 1.86
PRKN-209ENST00000612485 UBR1Q8IWV7 1749 aa26.68■■□□□ 1.86
PRKN-209ENST00000612485 CPS1P31327 1500 aa26.65■■□□□ 1.86
PRKN-209ENST00000612485 IQGAP1P46940 1657 aa26.63■■□□□ 1.85
PRKN-209ENST00000612485 EFCAB6Q5THR3 1501 aa26.63■■□□□ 1.85
PRKN-209ENST00000612485 ROCK1Q13464 1354 aa26.62■■□□□ 1.85
PRKN-209ENST00000612485 UBAP1LF5GYI3 381 aa26.61■■□□□ 1.85
PRKN-209ENST00000612485 PPARGC1BQ86YN6 1023 aaKnown RBP26.61■■□□□ 1.85
PRKN-209ENST00000612485 STAG3Q9UJ98 1225 aa26.61■■□□□ 1.85
PRKN-209ENST00000612485 SLIT1O75093 1534 aa26.6■■□□□ 1.85
PRKN-209ENST00000612485 SCAF11Q99590 1463 aaKnown RBP26.6■■□□□ 1.85
PRKN-209ENST00000612485 ARHGAP23Q9P227 1491 aa26.6■■□□□ 1.85
PRKN-209ENST00000612485 PIK3C2BO00750 1634 aa26.59■■□□□ 1.85
PRKN-209ENST00000612485 TXNDC2Q86VQ3 553 aa26.58■■□□□ 1.85
PRKN-209ENST00000612485 EID1Q9Y6B2 187 aa26.58■■□□□ 1.85
PRKN-209ENST00000612485 NOS1P29475 1434 aa26.57■■□□□ 1.84
PRKN-209ENST00000612485 IDI1Q13907 227 aa26.57■■□□□ 1.84
PRKN-209ENST00000612485 RPRD2Q5VT52 1461 aaKnown RBP26.56■■□□□ 1.84
PRKN-209ENST00000612485 LTKP29376 864 aa26.55■■□□□ 1.84
PRKN-209ENST00000612485 TMEM2Q9UHN6 1383 aa26.55■■□□□ 1.84
PRKN-209ENST00000612485 SYNMO15061 1565 aa26.54■■□□□ 1.84
PRKN-209ENST00000612485 KDM5AP29375 1690 aaKnown RBP26.54■■□□□ 1.84
PRKN-209ENST00000612485 ITGAEP38570 1179 aa26.54■■□□□ 1.84
PRKN-209ENST00000612485 SLC52A1Q9NWF4 448 aa26.54■■□□□ 1.84
PRKN-209ENST00000612485 UNC13BO14795 1591 aa26.54■■□□□ 1.84
PRKN-209ENST00000612485 TET3O43151 1660 aa26.52■■□□□ 1.84
PRKN-209ENST00000612485 TOM1O60784 492 aa26.49■■□□□ 1.83
PRKN-209ENST00000612485 ADGRB3O60242 1522 aa26.48■■□□□ 1.83
PRKN-209ENST00000612485 GCC2Q8IWJ2 1684 aa26.47■■□□□ 1.83
PRKN-209ENST00000612485 RRBP1Q9P2E9 1410 aaKnown RBP26.43■■□□□ 1.82
PRKN-209ENST00000612485 NUP155O75694 1391 aa26.43■■□□□ 1.82
PRKN-209ENST00000612485 STRCP1A6NGW2 1772 aa26.43■■□□□ 1.82
PRKN-209ENST00000612485 IQGAP3Q86VI3 1631 aa26.43■■□□□ 1.82
PRKN-209ENST00000612485 LRRC7Q96NW7 1537 aa26.42■■□□□ 1.82
PRKN-209ENST00000612485 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
PRKN-209ENST00000612485 PIP4K2BP78356 416 aa26.4■■□□□ 1.82
PRKN-209ENST00000612485 E9PCH4 1651 aa26.38■■□□□ 1.81
PRKN-209ENST00000612485 DISP3Q9P2K9 1392 aa26.37■■□□□ 1.81
PRKN-209ENST00000612485 HDGFP51858 240 aaKnown RBP26.36■■□□□ 1.81
PRKN-209ENST00000612485 TMEM131LA2VDJ0 1609 aa26.33■■□□□ 1.81
PRKN-209ENST00000612485 BCANQ96GW7 911 aa26.33■■□□□ 1.81
PRKN-209ENST00000612485 ZFYVE9O95405 1425 aa26.32■■□□□ 1.8
PRKN-209ENST00000612485 CHGAP10645 457 aaKnown RBP26.32■■□□□ 1.8
PRKN-209ENST00000612485 SLC26A8Q96RN1 970 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms