RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 A2ML1A8K2U0 1454 aa22.16■■□□□ 1.14
MUC1-222ENST00000610468 KIF3BO15066 747 aa22.16■■□□□ 1.14
MUC1-222ENST00000610468 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
MUC1-222ENST00000610468 PZPP20742 1482 aa22.15■■□□□ 1.14
MUC1-222ENST00000610468 TNRQ92752 1358 aa22.12■■□□□ 1.13
MUC1-222ENST00000610468 ZNF335Q9H4Z2 1342 aaPredicted RBP22.11■■□□□ 1.13
MUC1-222ENST00000610468 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
MUC1-222ENST00000610468 DNMT1P26358 1616 aaKnown RBP22.1■■□□□ 1.13
MUC1-222ENST00000610468 TSPY4P0CV99 314 aa22.1■■□□□ 1.13
MUC1-222ENST00000610468 TSPY10P0CW01 314 aa22.1■■□□□ 1.13
MUC1-222ENST00000610468 FBXO31Q5XUX0 539 aaPredicted RBP22.09■■□□□ 1.13
MUC1-222ENST00000610468 WASHC2CQ9Y4E1 1318 aa22.08■■□□□ 1.13
MUC1-222ENST00000610468 MAST1Q9Y2H9 1570 aa22.08■■□□□ 1.13
MUC1-222ENST00000610468 MIA2Q96PC5 1412 aa22.08■■□□□ 1.13
MUC1-222ENST00000610468 KANK4Q5T7N3 995 aaPredicted RBP22.07■■□□□ 1.12
MUC1-222ENST00000610468 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
MUC1-222ENST00000610468 RNF17Q9BXT8 1623 aaKnown RBP22.05■■□□□ 1.12
MUC1-222ENST00000610468 NLRP1Q9C000 1473 aa22.03■■□□□ 1.12
MUC1-222ENST00000610468 NEURL4Q96JN8 1562 aa22.02■■□□□ 1.12
MUC1-222ENST00000610468 ABCC3O15438 1527 aa22.01■■□□□ 1.11
MUC1-222ENST00000610468 EIF2AK4Q9P2K8 1649 aaKnown RBP22■■□□□ 1.11
MUC1-222ENST00000610468 DISP3Q9P2K9 1392 aa21.98■■□□□ 1.11
MUC1-222ENST00000610468 MROH1Q8NDA8 1641 aa21.97■■□□□ 1.11
MUC1-222ENST00000610468 ZC3H13Q5T200 1668 aaKnown RBP21.97■■□□□ 1.11
MUC1-222ENST00000610468 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.97■■□□□ 1.11
MUC1-222ENST00000610468 SPATA31D1Q6ZQQ2 1576 aa21.96■■□□□ 1.11
MUC1-222ENST00000610468 UGGT1Q9NYU2 1555 aa21.96■■□□□ 1.11
MUC1-222ENST00000610468 THEMISQ8N1K5 641 aaPredicted RBP21.96■■□□□ 1.11
MUC1-222ENST00000610468 MED14O60244 1454 aa21.96■■□□□ 1.11
MUC1-222ENST00000610468 POLR1AO95602 1720 aaPredicted RBP21.95■■□□□ 1.1
MUC1-222ENST00000610468 UBAP1LF5GYI3 381 aa21.95■■□□□ 1.1
MUC1-222ENST00000610468 SHANK2Q9UPX8 1470 aa21.95■■□□□ 1.1
MUC1-222ENST00000610468 DUOX2Q9NRD8 1548 aa21.95■■□□□ 1.1
MUC1-222ENST00000610468 ANKLE2Q86XL3 938 aa21.94■■□□□ 1.1
MUC1-222ENST00000610468 ERVK-7P63135 1459 aa21.94■■□□□ 1.1
MUC1-222ENST00000610468 CPS1P31327 1500 aa21.94■■□□□ 1.1
MUC1-222ENST00000610468 DEPDC5O75140 1603 aa21.92■■□□□ 1.1
MUC1-222ENST00000610468 ABCC5O15440 1437 aa21.91■■□□□ 1.1
MUC1-222ENST00000610468 NPHP4O75161 1426 aaPredicted RBP21.9■■□□□ 1.1
MUC1-222ENST00000610468 KIF15Q9NS87 1388 aa21.9■■□□□ 1.1
MUC1-222ENST00000610468 VWDEQ8N2E2 1590 aa21.9■■□□□ 1.1
MUC1-222ENST00000610468 ERBINQ96RT1 1412 aa21.89■■□□□ 1.1
MUC1-222ENST00000610468 ILDR2Q71H61 639 aa21.89■■□□□ 1.09
MUC1-222ENST00000610468 PRDM15P57071 1507 aaPredicted RBP21.89■■□□□ 1.09
MUC1-222ENST00000610468 ARHGAP31Q2M1Z3 1444 aa21.88■■□□□ 1.09
MUC1-222ENST00000610468 PTPN23Q9H3S7 1636 aa21.86■■□□□ 1.09
MUC1-222ENST00000610468 FGD6Q6ZV73 1430 aa21.86■■□□□ 1.09
MUC1-222ENST00000610468 DAPK1P53355 1430 aa21.85■■□□□ 1.09
MUC1-222ENST00000610468 CROCC2H7BZ55 1655 aa21.85■■□□□ 1.09
MUC1-222ENST00000610468 APLP2Q06481 763 aa21.83■■□□□ 1.09
MUC1-222ENST00000610468 RRP7BPQ9NSQ0 103 aa21.82■■□□□ 1.08
MUC1-222ENST00000610468 IQGAP1P46940 1657 aa21.82■■□□□ 1.08
MUC1-222ENST00000610468 CEP152O94986 1710 aa21.81■■□□□ 1.08
MUC1-222ENST00000610468 ARHGAP23Q9P227 1491 aa21.8■■□□□ 1.08
MUC1-222ENST00000610468 SOCS7O14512 581 aa21.79■■□□□ 1.08
MUC1-222ENST00000610468 TOM1O60784 492 aa21.79■■□□□ 1.08
MUC1-222ENST00000610468 UBR1Q8IWV7 1749 aa21.78■■□□□ 1.08
MUC1-222ENST00000610468 SLIT1O75093 1534 aa21.78■■□□□ 1.08
MUC1-222ENST00000610468 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.08
MUC1-222ENST00000610468 ANKRD30AQ9BXX3 1397 aa21.76■■□□□ 1.07
MUC1-222ENST00000610468 LMTK2Q8IWU2 1503 aa21.76■■□□□ 1.07
MUC1-222ENST00000610468 ALKQ9UM73 1620 aa21.76■■□□□ 1.07
MUC1-222ENST00000610468 HSPA1LP34931 641 aa21.74■■□□□ 1.07
MUC1-222ENST00000610468 LRRC7Q96NW7 1537 aa21.74■■□□□ 1.07
MUC1-222ENST00000610468 KANK1Q14678 1352 aa21.74■■□□□ 1.07
MUC1-222ENST00000610468 PIP4K2BP78356 416 aa21.73■■□□□ 1.07
MUC1-222ENST00000610468 SYNMO15061 1565 aa21.73■■□□□ 1.07
MUC1-222ENST00000610468 ADGRL2O95490 1459 aa21.72■■□□□ 1.07
MUC1-222ENST00000610468 LTKP29376 864 aa21.72■■□□□ 1.07
MUC1-222ENST00000610468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.72■■□□□ 1.07
MUC1-222ENST00000610468 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
MUC1-222ENST00000610468 STRCP1A6NGW2 1772 aa21.7■■□□□ 1.06
MUC1-222ENST00000610468 TMEM2Q9UHN6 1383 aa21.7■■□□□ 1.06
MUC1-222ENST00000610468 TXNDC2Q86VQ3 553 aa21.69■■□□□ 1.06
MUC1-222ENST00000610468 CHIC2Q9UKJ5 165 aa21.69■■□□□ 1.06
MUC1-222ENST00000610468 PIK3C2BO00750 1634 aa21.67■■□□□ 1.06
MUC1-222ENST00000610468 EFCAB6Q5THR3 1501 aa21.67■■□□□ 1.06
MUC1-222ENST00000610468 NOS1P29475 1434 aa21.67■■□□□ 1.06
MUC1-222ENST00000610468 KDM5AP29375 1690 aaKnown RBP21.66■■□□□ 1.06
MUC1-222ENST00000610468 EID1Q9Y6B2 187 aa21.66■■□□□ 1.06
MUC1-222ENST00000610468 IDI1Q13907 227 aa21.64■■□□□ 1.05
MUC1-222ENST00000610468 MED1Q15648 1581 aaPredicted RBP21.64■■□□□ 1.05
MUC1-222ENST00000610468 CFAP65Q6ZU64 1925 aaKnown RBP21.62■■□□□ 1.05
MUC1-222ENST00000610468 ANKRD50Q9ULJ7 1429 aa21.62■■□□□ 1.05
MUC1-222ENST00000610468 RPRD2Q5VT52 1461 aaKnown RBP21.61■■□□□ 1.05
MUC1-222ENST00000610468 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
MUC1-222ENST00000610468 FAM50AQ14320 339 aaKnown RBP21.59■■□□□ 1.05
MUC1-222ENST00000610468 SLC52A1Q9NWF4 448 aa21.59■■□□□ 1.05
MUC1-222ENST00000610468 ADGRB3O60242 1522 aa21.59■■□□□ 1.05
MUC1-222ENST00000610468 TET3O43151 1660 aa21.57■■□□□ 1.04
MUC1-222ENST00000610468 KCNA6P17658 529 aa21.53■■□□□ 1.04
MUC1-222ENST00000610468 TMEM94Q12767 1356 aa21.51■■□□□ 1.03
MUC1-222ENST00000610468 ROCK1Q13464 1354 aa21.51■■□□□ 1.03
MUC1-222ENST00000610468 ZFYVE9O95405 1425 aa21.51■■□□□ 1.03
MUC1-222ENST00000610468 XIRP1Q702N8 1843 aaKnown RBP21.5■■□□□ 1.03
MUC1-222ENST00000610468 UNC13BO14795 1591 aa21.5■■□□□ 1.03
MUC1-222ENST00000610468 SLC26A8Q96RN1 970 aa21.5■■□□□ 1.03
MUC1-222ENST00000610468 NWD1Q149M9 1564 aa21.49■■□□□ 1.03
MUC1-222ENST00000610468 FAM135BQ49AJ0 1406 aa21.49■■□□□ 1.03
MUC1-222ENST00000610468 NKTRP30414 1462 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms