RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 DNMT1P26358 1616 aaKnown RBP27.87■■■□□ 2.05
CHMP4A-211ENST00000609024 TNRQ92752 1358 aa27.86■■■□□ 2.05
CHMP4A-211ENST00000609024 MBD5Q9P267 1494 aa27.84■■■□□ 2.05
CHMP4A-211ENST00000609024 WASHC2CQ9Y4E1 1318 aa27.84■■■□□ 2.05
CHMP4A-211ENST00000609024 FBXO31Q5XUX0 539 aaPredicted RBP27.82■■■□□ 2.04
CHMP4A-211ENST00000609024 ANKLE2Q86XL3 938 aa27.82■■■□□ 2.04
CHMP4A-211ENST00000609024 CPS1P31327 1500 aa27.82■■■□□ 2.04
CHMP4A-211ENST00000609024 POLR1AO95602 1720 aaPredicted RBP27.81■■■□□ 2.04
CHMP4A-211ENST00000609024 RSPH4AQ5TD94 716 aa27.81■■■□□ 2.04
CHMP4A-211ENST00000609024 THEMISQ8N1K5 641 aaPredicted RBP27.8■■■□□ 2.04
CHMP4A-211ENST00000609024 CEP162Q5TB80 1403 aa27.8■■■□□ 2.04
CHMP4A-211ENST00000609024 KDM5DQ9BY66 1539 aa27.8■■■□□ 2.04
CHMP4A-211ENST00000609024 HSPA1LP34931 641 aa27.79■■■□□ 2.04
CHMP4A-211ENST00000609024 PZPP20742 1482 aa27.78■■■□□ 2.04
CHMP4A-211ENST00000609024 CCDC141Q6ZP82 1450 aa27.78■■■□□ 2.04
CHMP4A-211ENST00000609024 SHANK2Q9UPX8 1470 aa27.77■■■□□ 2.04
CHMP4A-211ENST00000609024 FAM135AQ9P2D6 1515 aa27.77■■■□□ 2.04
CHMP4A-211ENST00000609024 TSPY4P0CV99 314 aa27.75■■■□□ 2.03
CHMP4A-211ENST00000609024 TSPY10P0CW01 314 aa27.75■■■□□ 2.03
CHMP4A-211ENST00000609024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.74■■■□□ 2.03
CHMP4A-211ENST00000609024 CAMSAP2Q08AD1 1489 aa27.72■■■□□ 2.03
CHMP4A-211ENST00000609024 NEURL4Q96JN8 1562 aa27.72■■■□□ 2.03
CHMP4A-211ENST00000609024 MIA2Q96PC5 1412 aa27.71■■■□□ 2.03
CHMP4A-211ENST00000609024 NLRP1Q9C000 1473 aa27.7■■■□□ 2.03
CHMP4A-211ENST00000609024 PHF23Q9BUL5 403 aaPredicted RBP27.7■■■□□ 2.02
CHMP4A-211ENST00000609024 UGGT1Q9NYU2 1555 aa27.69■■■□□ 2.02
CHMP4A-211ENST00000609024 NCOA2Q15596 1464 aa27.69■■■□□ 2.02
CHMP4A-211ENST00000609024 MED1Q15648 1581 aaPredicted RBP27.68■■■□□ 2.02
CHMP4A-211ENST00000609024 NPHP4O75161 1426 aaPredicted RBP27.67■■■□□ 2.02
CHMP4A-211ENST00000609024 VWDEQ8N2E2 1590 aa27.61■■■□□ 2.01
CHMP4A-211ENST00000609024 DEPDC5O75140 1603 aa27.61■■■□□ 2.01
CHMP4A-211ENST00000609024 ARHGEF5Q12774 1597 aa27.6■■■□□ 2.01
CHMP4A-211ENST00000609024 MED14O60244 1454 aa27.6■■■□□ 2.01
CHMP4A-211ENST00000609024 SENP3Q9H4L4 574 aaPredicted RBP27.59■■■□□ 2.01
CHMP4A-211ENST00000609024 IQGAP1P46940 1657 aa27.59■■■□□ 2.01
CHMP4A-211ENST00000609024 ZC3H13Q5T200 1668 aaKnown RBP27.54■■■□□ 2
CHMP4A-211ENST00000609024 ABCC3O15438 1527 aa27.51■■■□□ 2
CHMP4A-211ENST00000609024 RNF17Q9BXT8 1623 aaKnown RBP27.51■■□□□ 1.99
CHMP4A-211ENST00000609024 LRRC7Q96NW7 1537 aa27.48■■□□□ 1.99
CHMP4A-211ENST00000609024 ERVK-7P63135 1459 aa27.48■■□□□ 1.99
CHMP4A-211ENST00000609024 EIF2AK4Q9P2K8 1649 aaKnown RBP27.47■■□□□ 1.99
CHMP4A-211ENST00000609024 SYNMO15061 1565 aa27.47■■□□□ 1.99
CHMP4A-211ENST00000609024 MAST1Q9Y2H9 1570 aa27.46■■□□□ 1.99
CHMP4A-211ENST00000609024 LRRC9Q6ZRR7 1453 aa27.44■■□□□ 1.98
CHMP4A-211ENST00000609024 TXNDC2Q86VQ3 553 aa27.43■■□□□ 1.98
CHMP4A-211ENST00000609024 EID1Q9Y6B2 187 aa27.43■■□□□ 1.98
CHMP4A-211ENST00000609024 ALKQ9UM73 1620 aa27.42■■□□□ 1.98
CHMP4A-211ENST00000609024 SCAF11Q99590 1463 aaKnown RBP27.42■■□□□ 1.98
CHMP4A-211ENST00000609024 CFAP65Q6ZU64 1925 aaKnown RBP27.41■■□□□ 1.98
CHMP4A-211ENST00000609024 STRCP1A6NGW2 1772 aa27.41■■□□□ 1.98
CHMP4A-211ENST00000609024 STAG3Q9UJ98 1225 aa27.4■■□□□ 1.98
CHMP4A-211ENST00000609024 CEP152O94986 1710 aa27.4■■□□□ 1.98
CHMP4A-211ENST00000609024 UBR1Q8IWV7 1749 aa27.39■■□□□ 1.98
CHMP4A-211ENST00000609024 DUOX2Q9NRD8 1548 aa27.38■■□□□ 1.97
CHMP4A-211ENST00000609024 MYOM3Q5VTT5 1437 aa27.38■■□□□ 1.97
CHMP4A-211ENST00000609024 VPS8Q8N3P4 1428 aa27.37■■□□□ 1.97
CHMP4A-211ENST00000609024 MROH1Q8NDA8 1641 aa27.34■■□□□ 1.97
CHMP4A-211ENST00000609024 LTKP29376 864 aa27.34■■□□□ 1.97
CHMP4A-211ENST00000609024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.34■■□□□ 1.971e-7■■■■□ 22.6
CHMP4A-211ENST00000609024 KANK1Q14678 1352 aa27.31■■□□□ 1.96
CHMP4A-211ENST00000609024 KIF15Q9NS87 1388 aa27.31■■□□□ 1.96
CHMP4A-211ENST00000609024 SLIT1O75093 1534 aa27.31■■□□□ 1.96
CHMP4A-211ENST00000609024 KANK4Q5T7N3 995 aaPredicted RBP27.3■■□□□ 1.96
CHMP4A-211ENST00000609024 RRP7BPQ9NSQ0 103 aa27.3■■□□□ 1.96
CHMP4A-211ENST00000609024 ARHGAP31Q2M1Z3 1444 aa27.29■■□□□ 1.96
CHMP4A-211ENST00000609024 ARHGAP23Q9P227 1491 aa27.29■■□□□ 1.96
CHMP4A-211ENST00000609024 ERBINQ96RT1 1412 aa27.27■■□□□ 1.96
CHMP4A-211ENST00000609024 PRDM15P57071 1507 aaPredicted RBP27.26■■□□□ 1.95
CHMP4A-211ENST00000609024 MAP3K1Q13233 1512 aa27.26■■□□□ 1.95
CHMP4A-211ENST00000609024 APLP2Q06481 763 aa27.25■■□□□ 1.95
CHMP4A-211ENST00000609024 TMEM2Q9UHN6 1383 aa27.24■■□□□ 1.95
CHMP4A-211ENST00000609024 PIK3C2BO00750 1634 aa27.22■■□□□ 1.95
CHMP4A-211ENST00000609024 BCANQ96GW7 911 aa27.21■■□□□ 1.95
CHMP4A-211ENST00000609024 FAM135BQ49AJ0 1406 aa27.2■■□□□ 1.94
CHMP4A-211ENST00000609024 PROSER2Q86WR7 435 aaPredicted RBP27.19■■□□□ 1.94
CHMP4A-211ENST00000609024 TMEM94Q12767 1356 aa27.19■■□□□ 1.94
CHMP4A-211ENST00000609024 XIRP1Q702N8 1843 aaKnown RBP27.18■■□□□ 1.94
CHMP4A-211ENST00000609024 ABCC5O15440 1437 aa27.18■■□□□ 1.94
CHMP4A-211ENST00000609024 EFCAB6Q5THR3 1501 aa27.18■■□□□ 1.94
CHMP4A-211ENST00000609024 LOC105371045A0A1W2PR82 267 aa27.18■■□□□ 1.94
CHMP4A-211ENST00000609024 KCNA6P17658 529 aa27.18■■□□□ 1.94
CHMP4A-211ENST00000609024 RGS17Q9UGC6 210 aaPredicted RBP27.18■■□□□ 1.94
CHMP4A-211ENST00000609024 CROCC2H7BZ55 1655 aa27.17■■□□□ 1.94
CHMP4A-211ENST00000609024 IDI1Q13907 227 aa27.16■■□□□ 1.94
CHMP4A-211ENST00000609024 SLC26A8Q96RN1 970 aa27.16■■□□□ 1.94
CHMP4A-211ENST00000609024 PTPN23Q9H3S7 1636 aa27.15■■□□□ 1.94
CHMP4A-211ENST00000609024 ANKRD30AQ9BXX3 1397 aa27.14■■□□□ 1.94
CHMP4A-211ENST00000609024 CHIC2Q9UKJ5 165 aa27.13■■□□□ 1.93
CHMP4A-211ENST00000609024 KDM5AP29375 1690 aaKnown RBP27.13■■□□□ 1.93
CHMP4A-211ENST00000609024 DAPK1P53355 1430 aa27.13■■□□□ 1.93
CHMP4A-211ENST00000609024 RBM33Q96EV2 1170 aaKnown RBP27.1■■□□□ 1.93
CHMP4A-211ENST00000609024 MSH6P52701 1360 aa27.09■■□□□ 1.93
CHMP4A-211ENST00000609024 ROBO1Q9Y6N7 1651 aa27.08■■□□□ 1.93
CHMP4A-211ENST00000609024 LMTK2Q8IWU2 1503 aa27.07■■□□□ 1.92
CHMP4A-211ENST00000609024 SLC52A1Q9NWF4 448 aa27.07■■□□□ 1.92
CHMP4A-211ENST00000609024 PPP1R15AO75807 674 aaPredicted RBP27.05■■□□□ 1.92
CHMP4A-211ENST00000609024 HDGFP51858 240 aaKnown RBP27.05■■□□□ 1.92
CHMP4A-211ENST00000609024 POTEAQ6S8J7 498 aa27.05■■□□□ 1.92
CHMP4A-211ENST00000609024 FGD6Q6ZV73 1430 aa27.04■■□□□ 1.92
CHMP4A-211ENST00000609024 NKTRP30414 1462 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms