RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 DNMT1P26358 1616 aaKnown RBP21.79■■□□□ 1.08
IRF3-225ENST00000600022 WASHC2CQ9Y4E1 1318 aa21.79■■□□□ 1.08
IRF3-225ENST00000600022 A2ML1A8K2U0 1454 aa21.78■■□□□ 1.08
IRF3-225ENST00000600022 IQSEC2Q5JU85 1478 aa21.78■■□□□ 1.08
IRF3-225ENST00000600022 KANK4Q5T7N3 995 aaPredicted RBP21.78■■□□□ 1.08
IRF3-225ENST00000600022 TNRQ92752 1358 aa21.77■■□□□ 1.08
IRF3-225ENST00000600022 RSPH4AQ5TD94 716 aa21.75■■□□□ 1.07
IRF3-225ENST00000600022 TSPY4P0CV99 314 aa21.73■■□□□ 1.07
IRF3-225ENST00000600022 TSPY10P0CW01 314 aa21.73■■□□□ 1.07
IRF3-225ENST00000600022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.73■■□□□ 1.073e-6■□□□□ 11.3
IRF3-225ENST00000600022 PZPP20742 1482 aa21.72■■□□□ 1.07
IRF3-225ENST00000600022 SOCS7O14512 581 aa21.71■■□□□ 1.07
IRF3-225ENST00000600022 LRRC9Q6ZRR7 1453 aa21.71■■□□□ 1.07
IRF3-225ENST00000600022 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.07
IRF3-225ENST00000600022 MIA2Q96PC5 1412 aa21.7■■□□□ 1.06
IRF3-225ENST00000600022 SPATA31D1Q6ZQQ2 1576 aa21.7■■□□□ 1.06
IRF3-225ENST00000600022 NEURL4Q96JN8 1562 aa21.7■■□□□ 1.06
IRF3-225ENST00000600022 ARHGEF5Q12774 1597 aa21.68■■□□□ 1.06
IRF3-225ENST00000600022 VPS8Q8N3P4 1428 aa21.67■■□□□ 1.06
IRF3-225ENST00000600022 ANKLE2Q86XL3 938 aa21.67■■□□□ 1.06
IRF3-225ENST00000600022 THEMISQ8N1K5 641 aaPredicted RBP21.66■■□□□ 1.06
IRF3-225ENST00000600022 PIP4K2BP78356 416 aa21.65■■□□□ 1.06
IRF3-225ENST00000600022 SHANK2Q9UPX8 1470 aa21.64■■□□□ 1.05
IRF3-225ENST00000600022 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
IRF3-225ENST00000600022 HSPA1LP34931 641 aa21.63■■□□□ 1.05
IRF3-225ENST00000600022 UGGT1Q9NYU2 1555 aa21.61■■□□□ 1.05
IRF3-225ENST00000600022 POLR1AO95602 1720 aaPredicted RBP21.6■■□□□ 1.05
IRF3-225ENST00000600022 ABCC3O15438 1527 aa21.6■■□□□ 1.05
IRF3-225ENST00000600022 NLRP1Q9C000 1473 aa21.59■■□□□ 1.05
IRF3-225ENST00000600022 NPHP4O75161 1426 aaPredicted RBP21.59■■□□□ 1.05
IRF3-225ENST00000600022 VWDEQ8N2E2 1590 aa21.59■■□□□ 1.05
IRF3-225ENST00000600022 FAM135AQ9P2D6 1515 aa21.59■■□□□ 1.05
IRF3-225ENST00000600022 MAST1Q9Y2H9 1570 aa21.57■■□□□ 1.04
IRF3-225ENST00000600022 MYOM3Q5VTT5 1437 aa21.57■■□□□ 1.04
IRF3-225ENST00000600022 MROH1Q8NDA8 1641 aa21.57■■□□□ 1.04
IRF3-225ENST00000600022 RNF17Q9BXT8 1623 aaKnown RBP21.57■■□□□ 1.04
IRF3-225ENST00000600022 MED14O60244 1454 aa21.56■■□□□ 1.04
IRF3-225ENST00000600022 TOM1O60784 492 aa21.55■■□□□ 1.04
IRF3-225ENST00000600022 RRP7BPQ9NSQ0 103 aa21.55■■□□□ 1.04
IRF3-225ENST00000600022 CPS1P31327 1500 aa21.55■■□□□ 1.04
IRF3-225ENST00000600022 ERVK-7P63135 1459 aa21.54■■□□□ 1.04
IRF3-225ENST00000600022 CFAP65Q6ZU64 1925 aaKnown RBP21.54■■□□□ 1.04
IRF3-225ENST00000600022 SENP3Q9H4L4 574 aaPredicted RBP21.53■■□□□ 1.04
IRF3-225ENST00000600022 ALKQ9UM73 1620 aa21.53■■□□□ 1.04
IRF3-225ENST00000600022 MAP3K1Q13233 1512 aa21.52■■□□□ 1.04
IRF3-225ENST00000600022 LTKP29376 864 aa21.52■■□□□ 1.04
IRF3-225ENST00000600022 ABCC5O15440 1437 aa21.52■■□□□ 1.04
IRF3-225ENST00000600022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.035e-6■■■□□ 18.6
IRF3-225ENST00000600022 DEPDC5O75140 1603 aa21.51■■□□□ 1.03
IRF3-225ENST00000600022 STRCP1A6NGW2 1772 aa21.51■■□□□ 1.03
IRF3-225ENST00000600022 CEP152O94986 1710 aa21.5■■□□□ 1.03
IRF3-225ENST00000600022 KIF15Q9NS87 1388 aa21.48■■□□□ 1.03
IRF3-225ENST00000600022 EIF2AK4Q9P2K8 1649 aaKnown RBP21.48■■□□□ 1.03
IRF3-225ENST00000600022 IQGAP1P46940 1657 aa21.47■■□□□ 1.03
IRF3-225ENST00000600022 DUOX2Q9NRD8 1548 aa21.47■■□□□ 1.03
IRF3-225ENST00000600022 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
IRF3-225ENST00000600022 LRRC7Q96NW7 1537 aa21.46■■□□□ 1.03
IRF3-225ENST00000600022 TXNDC2Q86VQ3 553 aa21.46■■□□□ 1.03
IRF3-225ENST00000600022 ZC3H13Q5T200 1668 aaKnown RBP21.46■■□□□ 1.03
IRF3-225ENST00000600022 UBR1Q8IWV7 1749 aa21.44■■□□□ 1.02
IRF3-225ENST00000600022 PTPN23Q9H3S7 1636 aa21.42■■□□□ 1.02
IRF3-225ENST00000600022 MED1Q15648 1581 aaPredicted RBP21.41■■□□□ 1.02
IRF3-225ENST00000600022 DAPK1P53355 1430 aa21.41■■□□□ 1.02
IRF3-225ENST00000600022 SCAF11Q99590 1463 aaKnown RBP21.4■■□□□ 1.02
IRF3-225ENST00000600022 ARHGAP31Q2M1Z3 1444 aa21.4■■□□□ 1.02
IRF3-225ENST00000600022 ARHGAP23Q9P227 1491 aa21.39■■□□□ 1.02
IRF3-225ENST00000600022 IDI1Q13907 227 aa21.39■■□□□ 1.01
IRF3-225ENST00000600022 PRDM15P57071 1507 aaPredicted RBP21.39■■□□□ 1.01
IRF3-225ENST00000600022 ERBINQ96RT1 1412 aa21.38■■□□□ 1.01
IRF3-225ENST00000600022 APLP2Q06481 763 aa21.38■■□□□ 1.01
IRF3-225ENST00000600022 FGD6Q6ZV73 1430 aa21.38■■□□□ 1.01
IRF3-225ENST00000600022 CROCC2H7BZ55 1655 aa21.37■■□□□ 1.01
IRF3-225ENST00000600022 SLIT1O75093 1534 aa21.36■■□□□ 1.01
IRF3-225ENST00000600022 RBM33Q96EV2 1170 aaKnown RBP21.35■■□□□ 1.01
IRF3-225ENST00000600022 PIK3C2BO00750 1634 aa21.35■■□□□ 1.01
IRF3-225ENST00000600022 TMEM2Q9UHN6 1383 aa21.34■■□□□ 1.01
IRF3-225ENST00000600022 STAG3Q9UJ98 1225 aa21.33■■□□□ 1.01
IRF3-225ENST00000600022 EID1Q9Y6B2 187 aa21.33■■□□□ 1.01
IRF3-225ENST00000600022 SLC26A8Q96RN1 970 aa21.32■■□□□ 1
IRF3-225ENST00000600022 KANK1Q14678 1352 aa21.31■■□□□ 1
IRF3-225ENST00000600022 ANKRD30AQ9BXX3 1397 aa21.31■■□□□ 1
IRF3-225ENST00000600022 XIRP1Q702N8 1843 aaKnown RBP21.29■■□□□ 1
IRF3-225ENST00000600022 SYNMO15061 1565 aa21.28■■□□□ 1
IRF3-225ENST00000600022 FAM50AQ14320 339 aaKnown RBP21.28■■□□□ 1
IRF3-225ENST00000600022 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
IRF3-225ENST00000600022 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
IRF3-225ENST00000600022 RGS17Q9UGC6 210 aaPredicted RBP21.26■□□□□ 0.99
IRF3-225ENST00000600022 NOS1P29475 1434 aa21.25■□□□□ 0.99
IRF3-225ENST00000600022 EFCAB6Q5THR3 1501 aa21.24■□□□□ 0.99
IRF3-225ENST00000600022 TMEM94Q12767 1356 aa21.24■□□□□ 0.99
IRF3-225ENST00000600022 KCNA6P17658 529 aa21.24■□□□□ 0.99
IRF3-225ENST00000600022 TET3O43151 1660 aa21.24■□□□□ 0.99
IRF3-225ENST00000600022 PROSER2Q86WR7 435 aaPredicted RBP21.22■□□□□ 0.99
IRF3-225ENST00000600022 ADGRL2O95490 1459 aa21.2■□□□□ 0.98
IRF3-225ENST00000600022 BCANQ96GW7 911 aa21.19■□□□□ 0.98
IRF3-225ENST00000600022 SLC52A1Q9NWF4 448 aa21.18■□□□□ 0.98
IRF3-225ENST00000600022 ANKRD50Q9ULJ7 1429 aa21.18■□□□□ 0.98
IRF3-225ENST00000600022 FAM135BQ49AJ0 1406 aa21.17■□□□□ 0.98
IRF3-225ENST00000600022 ADGRB3O60242 1522 aa21.15■□□□□ 0.98
IRF3-225ENST00000600022 NUTM2DQ5VT03 806 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms