RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 ILDR2Q71H61 639 aa17.59■□□□□ 0.41
GRAMD1A-209ENST00000598580 ZNF142P52746 1687 aaPredicted RBP17.58■□□□□ 0.41
GRAMD1A-209ENST00000598580 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.41
GRAMD1A-209ENST00000598580 WASHC2CQ9Y4E1 1318 aa17.57■□□□□ 0.4
GRAMD1A-209ENST00000598580 TNRQ92752 1358 aa17.56■□□□□ 0.4
GRAMD1A-209ENST00000598580 DNMT1P26358 1616 aaKnown RBP17.56■□□□□ 0.4
GRAMD1A-209ENST00000598580 ARHGEF5Q12774 1597 aa17.56■□□□□ 0.4
GRAMD1A-209ENST00000598580 TSPY4P0CV99 314 aa17.55■□□□□ 0.4
GRAMD1A-209ENST00000598580 TSPY10P0CW01 314 aa17.55■□□□□ 0.4
GRAMD1A-209ENST00000598580 PZPP20742 1482 aa17.55■□□□□ 0.4
GRAMD1A-209ENST00000598580 IQSEC2Q5JU85 1478 aa17.55■□□□□ 0.4
GRAMD1A-209ENST00000598580 MIA2Q96PC5 1412 aa17.53■□□□□ 0.4
GRAMD1A-209ENST00000598580 DISP3Q9P2K9 1392 aa17.53■□□□□ 0.4
GRAMD1A-209ENST00000598580 KDM5DQ9BY66 1539 aa17.52■□□□□ 0.4
GRAMD1A-209ENST00000598580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.52■□□□□ 0.39
GRAMD1A-209ENST00000598580 UBAP1LF5GYI3 381 aa17.5■□□□□ 0.39
GRAMD1A-209ENST00000598580 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
GRAMD1A-209ENST00000598580 MAP3K1Q13233 1512 aa17.49■□□□□ 0.39
GRAMD1A-209ENST00000598580 MYOM3Q5VTT5 1437 aa17.48■□□□□ 0.39
GRAMD1A-209ENST00000598580 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
GRAMD1A-209ENST00000598580 ABCC3O15438 1527 aa17.47■□□□□ 0.39
GRAMD1A-209ENST00000598580 FAM135AQ9P2D6 1515 aa17.47■□□□□ 0.39
GRAMD1A-209ENST00000598580 ANKLE2Q86XL3 938 aa17.46■□□□□ 0.39
GRAMD1A-209ENST00000598580 THEMISQ8N1K5 641 aaPredicted RBP17.45■□□□□ 0.38
GRAMD1A-209ENST00000598580 MROH1Q8NDA8 1641 aa17.45■□□□□ 0.38
GRAMD1A-209ENST00000598580 RNF17Q9BXT8 1623 aaKnown RBP17.44■□□□□ 0.38
GRAMD1A-209ENST00000598580 ABCC5O15440 1437 aa17.44■□□□□ 0.38
GRAMD1A-209ENST00000598580 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
GRAMD1A-209ENST00000598580 SHANK2Q9UPX8 1470 aa17.43■□□□□ 0.38
GRAMD1A-209ENST00000598580 RRP7BPQ9NSQ0 103 aa17.42■□□□□ 0.38
GRAMD1A-209ENST00000598580 VWDEQ8N2E2 1590 aa17.41■□□□□ 0.38
GRAMD1A-209ENST00000598580 UGGT1Q9NYU2 1555 aa17.41■□□□□ 0.38
GRAMD1A-209ENST00000598580 ERVK-7P63135 1459 aa17.41■□□□□ 0.38
GRAMD1A-209ENST00000598580 NPHP4O75161 1426 aaPredicted RBP17.4■□□□□ 0.38
GRAMD1A-209ENST00000598580 MED14O60244 1454 aa17.4■□□□□ 0.38
GRAMD1A-209ENST00000598580 SPATA31D1Q6ZQQ2 1576 aa17.4■□□□□ 0.38
GRAMD1A-209ENST00000598580 KIF15Q9NS87 1388 aa17.39■□□□□ 0.37
GRAMD1A-209ENST00000598580 LTKP29376 864 aa17.38■□□□□ 0.37
GRAMD1A-209ENST00000598580 HSPA1LP34931 641 aa17.38■□□□□ 0.37
GRAMD1A-209ENST00000598580 SOCS7O14512 581 aa17.37■□□□□ 0.37
GRAMD1A-209ENST00000598580 PIP4K2BP78356 416 aa17.37■□□□□ 0.37
GRAMD1A-209ENST00000598580 POLR1AO95602 1720 aaPredicted RBP17.37■□□□□ 0.37
GRAMD1A-209ENST00000598580 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
GRAMD1A-209ENST00000598580 ALKQ9UM73 1620 aa17.36■□□□□ 0.37
GRAMD1A-209ENST00000598580 CPS1P31327 1500 aa17.36■□□□□ 0.37
GRAMD1A-209ENST00000598580 EIF2AK4Q9P2K8 1649 aaKnown RBP17.36■□□□□ 0.37
GRAMD1A-209ENST00000598580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.37
GRAMD1A-209ENST00000598580 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
GRAMD1A-209ENST00000598580 DEPDC5O75140 1603 aa17.34■□□□□ 0.37
GRAMD1A-209ENST00000598580 DAPK1P53355 1430 aa17.34■□□□□ 0.37
GRAMD1A-209ENST00000598580 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.36
GRAMD1A-209ENST00000598580 CEP152O94986 1710 aa17.33■□□□□ 0.36
GRAMD1A-209ENST00000598580 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
GRAMD1A-209ENST00000598580 ARHGAP31Q2M1Z3 1444 aa17.32■□□□□ 0.36
GRAMD1A-209ENST00000598580 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
GRAMD1A-209ENST00000598580 TOM1O60784 492 aa17.32■□□□□ 0.36
GRAMD1A-209ENST00000598580 ZC3H13Q5T200 1668 aaKnown RBP17.32■□□□□ 0.36
GRAMD1A-209ENST00000598580 CFAP65Q6ZU64 1925 aaKnown RBP17.31■□□□□ 0.36
GRAMD1A-209ENST00000598580 ERBINQ96RT1 1412 aa17.31■□□□□ 0.36
GRAMD1A-209ENST00000598580 STRCP1A6NGW2 1772 aa17.31■□□□□ 0.36
GRAMD1A-209ENST00000598580 PRDM15P57071 1507 aaPredicted RBP17.31■□□□□ 0.36
GRAMD1A-209ENST00000598580 APLP2Q06481 763 aa17.3■□□□□ 0.36
GRAMD1A-209ENST00000598580 TXNDC2Q86VQ3 553 aa17.3■□□□□ 0.36
GRAMD1A-209ENST00000598580 LRRC7Q96NW7 1537 aa17.3■□□□□ 0.36
GRAMD1A-209ENST00000598580 ARHGAP23Q9P227 1491 aa17.3■□□□□ 0.36
GRAMD1A-209ENST00000598580 IQGAP1P46940 1657 aa17.29■□□□□ 0.36
GRAMD1A-209ENST00000598580 UBR1Q8IWV7 1749 aa17.28■□□□□ 0.36
GRAMD1A-209ENST00000598580 IDI1Q13907 227 aa17.28■□□□□ 0.36
GRAMD1A-209ENST00000598580 CROCC2H7BZ55 1655 aa17.28■□□□□ 0.36
GRAMD1A-209ENST00000598580 SCAF11Q99590 1463 aaKnown RBP17.27■□□□□ 0.36
GRAMD1A-209ENST00000598580 SLIT1O75093 1534 aa17.26■□□□□ 0.35
GRAMD1A-209ENST00000598580 ANKRD30AQ9BXX3 1397 aa17.25■□□□□ 0.35
GRAMD1A-209ENST00000598580 TMEM2Q9UHN6 1383 aa17.24■□□□□ 0.35
GRAMD1A-209ENST00000598580 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
GRAMD1A-209ENST00000598580 LMTK2Q8IWU2 1503 aa17.22■□□□□ 0.35
GRAMD1A-209ENST00000598580 PIK3C2BO00750 1634 aa17.21■□□□□ 0.35
GRAMD1A-209ENST00000598580 NOS1P29475 1434 aa17.21■□□□□ 0.34
GRAMD1A-209ENST00000598580 KANK1Q14678 1352 aa17.2■□□□□ 0.34
GRAMD1A-209ENST00000598580 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
GRAMD1A-209ENST00000598580 SYNMO15061 1565 aa17.19■□□□□ 0.34
GRAMD1A-209ENST00000598580 ADGRL2O95490 1459 aa17.19■□□□□ 0.34
GRAMD1A-209ENST00000598580 EID1Q9Y6B2 187 aa17.19■□□□□ 0.34
GRAMD1A-209ENST00000598580 MED1Q15648 1581 aaPredicted RBP17.19■□□□□ 0.34
GRAMD1A-209ENST00000598580 RBM33Q96EV2 1170 aaKnown RBP17.18■□□□□ 0.34
GRAMD1A-209ENST00000598580 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
GRAMD1A-209ENST00000598580 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
GRAMD1A-209ENST00000598580 TET3O43151 1660 aa17.16■□□□□ 0.34
GRAMD1A-209ENST00000598580 ANKRD50Q9ULJ7 1429 aa17.15■□□□□ 0.34
GRAMD1A-209ENST00000598580 EFCAB6Q5THR3 1501 aa17.15■□□□□ 0.34
GRAMD1A-209ENST00000598580 KCNA6P17658 529 aa17.14■□□□□ 0.33
GRAMD1A-209ENST00000598580 XIRP1Q702N8 1843 aaKnown RBP17.14■□□□□ 0.33
GRAMD1A-209ENST00000598580 TMEM94Q12767 1356 aa17.14■□□□□ 0.33
GRAMD1A-209ENST00000598580 SLC52A1Q9NWF4 448 aa17.12■□□□□ 0.33
GRAMD1A-209ENST00000598580 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
GRAMD1A-209ENST00000598580 PROSER2Q86WR7 435 aaPredicted RBP17.09■□□□□ 0.33
GRAMD1A-209ENST00000598580 PPARGC1BQ86YN6 1023 aaKnown RBP17.09■□□□□ 0.33
GRAMD1A-209ENST00000598580 ZFYVE9O95405 1425 aa17.09■□□□□ 0.33
GRAMD1A-209ENST00000598580 ADGRB3O60242 1522 aa17.09■□□□□ 0.33
GRAMD1A-209ENST00000598580 KDM5AP29375 1690 aaKnown RBP17.08■□□□□ 0.32
GRAMD1A-209ENST00000598580 FAM135BQ49AJ0 1406 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms