RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, human

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYMPK-208	ENST00000598059	KDM5D	Q9BY66	1539 aa		33.6	■■■□□ 2.97
SYMPK-208	ENST00000598059	FAM135A	Q9P2D6	1515 aa		33.6	■■■□□ 2.97
SYMPK-208	ENST00000598059	MAST1	Q9Y2H9	1570 aa		33.6	■■■□□ 2.97
SYMPK-208	ENST00000598059	PLA2R1	Q13018	1463 aa		33.56	■■■□□ 2.96
SYMPK-208	ENST00000598059	WASHC2C	Q9Y4E1	1318 aa		33.56	■■■□□ 2.96
SYMPK-208	ENST00000598059	NCKAP5L	Q9HCH0	1330 aa		33.55	■■■□□ 2.96
SYMPK-208	ENST00000598059	PZP	P20742	1482 aa		33.53	■■■□□ 2.96
SYMPK-208	ENST00000598059	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.53	■■■□□ 2.96
SYMPK-208	ENST00000598059	LTBP4	Q8N2S1	1624 aa		33.53	■■■□□ 2.96
SYMPK-208	ENST00000598059	A2ML1	A8K2U0	1454 aa		33.52	■■■□□ 2.96
SYMPK-208	ENST00000598059	APLP2	Q06481	763 aa		33.52	■■■□□ 2.96
SYMPK-208	ENST00000598059	PKD2	Q13563	968 aa		33.51	■■■□□ 2.95
SYMPK-208	ENST00000598059	TCOF1	Q13428	1488 aa	Known RBP	33.5	■■■□□ 2.95
SYMPK-208	ENST00000598059	TNR	Q92752	1358 aa		33.49	■■■□□ 2.95
SYMPK-208	ENST00000598059	DNMT1	P26358	1616 aa	Known RBP	33.49	■■■□□ 2.95
SYMPK-208	ENST00000598059	RNF17	Q9BXT8	1623 aa	Known RBP	33.49	■■■□□ 2.95
SYMPK-208	ENST00000598059	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.45	■■■□□ 2.95
SYMPK-208	ENST00000598059	PTPN23	Q9H3S7	1636 aa		33.42	■■■□□ 2.94
SYMPK-208	ENST00000598059	ZC3H13	Q5T200	1668 aa	Known RBP	33.39	■■■□□ 2.94
SYMPK-208	ENST00000598059	ABCC3	O15438	1527 aa		33.39	■■■□□ 2.94
SYMPK-208	ENST00000598059	DUOX2	Q9NRD8	1548 aa		33.39	■■■□□ 2.94
SYMPK-208	ENST00000598059	IQSEC2	Q5JU85	1478 aa		33.38	■■■□□ 2.93
SYMPK-208	ENST00000598059	ABCC5	O15440	1437 aa		33.38	■■■□□ 2.93
SYMPK-208	ENST00000598059	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.38	■■■□□ 2.93
SYMPK-208	ENST00000598059	CROCC2	H7BZ55	1655 aa		33.38	■■■□□ 2.93
SYMPK-208	ENST00000598059	MROH1	Q8NDA8	1641 aa		33.37	■■■□□ 2.93
SYMPK-208	ENST00000598059	SHANK2	Q9UPX8	1470 aa		33.37	■■■□□ 2.93
SYMPK-208	ENST00000598059	NLRP1	Q9C000	1473 aa		33.36	■■■□□ 2.93
SYMPK-208	ENST00000598059	FGD6	Q6ZV73	1430 aa		33.35	■■■□□ 2.93
SYMPK-208	ENST00000598059	KIF15	Q9NS87	1388 aa		33.34	■■■□□ 2.93
SYMPK-208	ENST00000598059	POLR1A	O95602	1720 aa	Predicted RBP	33.33	■■■□□ 2.93
SYMPK-208	ENST00000598059	DAPK1	P53355	1430 aa		33.3	■■■□□ 2.92
SYMPK-208	ENST00000598059	CEP152	O94986	1710 aa		33.29	■■■□□ 2.92
SYMPK-208	ENST00000598059	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.29	■■■□□ 2.92
SYMPK-208	ENST00000598059	RRP7BP	Q9NSQ0	103 aa		33.29	■■■□□ 2.92
SYMPK-208	ENST00000598059	SPATA31D1	Q6ZQQ2	1576 aa		33.29	■■■□□ 2.92
SYMPK-208	ENST00000598059	NEURL4	Q96JN8	1562 aa		33.29	■■■□□ 2.92
SYMPK-208	ENST00000598059	UGGT1	Q9NYU2	1555 aa		33.29	■■■□□ 2.92
SYMPK-208	ENST00000598059	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.28	■■■□□ 2.92
SYMPK-208	ENST00000598059	ERBIN	Q96RT1	1412 aa		33.28	■■■□□ 2.92
SYMPK-208	ENST00000598059	CFAP65	Q6ZU64	1925 aa	Known RBP	33.26	■■■□□ 2.92
SYMPK-208	ENST00000598059	ERVK-7	P63135	1459 aa		33.25	■■■□□ 2.91
SYMPK-208	ENST00000598059	PRDM15	P57071	1507 aa	Predicted RBP	33.24	■■■□□ 2.91
SYMPK-208	ENST00000598059	ANKLE2	Q86XL3	938 aa		33.24	■■■□□ 2.91
SYMPK-208	ENST00000598059	DEPDC5	O75140	1603 aa		33.18	■■■□□ 2.9
SYMPK-208	ENST00000598059	CHIC2	Q9UKJ5	165 aa		33.18	■■■□□ 2.9
SYMPK-208	ENST00000598059	ANKRD30A	Q9BXX3	1397 aa		33.17	■■■□□ 2.9
SYMPK-208	ENST00000598059	ARHGAP31	Q2M1Z3	1444 aa		33.16	■■■□□ 2.9
SYMPK-208	ENST00000598059	MED14	O60244	1454 aa		33.16	■■■□□ 2.9
SYMPK-208	ENST00000598059	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.14	■■■□□ 2.9	3e-7	■■■□□ 17.8
SYMPK-208	ENST00000598059	NPHP4	O75161	1426 aa	Predicted RBP	33.12	■■■□□ 2.89
SYMPK-208	ENST00000598059	UBAP1L	F5GYI3	381 aa		33.11	■■■□□ 2.89
SYMPK-208	ENST00000598059	UBR1	Q8IWV7	1749 aa		33.1	■■■□□ 2.89
SYMPK-208	ENST00000598059	KANK1	Q14678	1352 aa		33.09	■■■□□ 2.89
SYMPK-208	ENST00000598059	CPS1	P31327	1500 aa		33.09	■■■□□ 2.89
SYMPK-208	ENST00000598059	IQGAP1	P46940	1657 aa		33.08	■■■□□ 2.89
SYMPK-208	ENST00000598059	VWDE	Q8N2E2	1590 aa		33.08	■■■□□ 2.89
SYMPK-208	ENST00000598059	ADGRL2	O95490	1459 aa		33.07	■■■□□ 2.88
SYMPK-208	ENST00000598059	FAM50A	Q14320	339 aa	Known RBP	33.07	■■■□□ 2.88
SYMPK-208	ENST00000598059	LMTK2	Q8IWU2	1503 aa		33.03	■■■□□ 2.88
SYMPK-208	ENST00000598059	SLIT1	O75093	1534 aa		32.97	■■■□□ 2.87
SYMPK-208	ENST00000598059	SCAF11	Q99590	1463 aa	Known RBP	32.97	■■■□□ 2.87
SYMPK-208	ENST00000598059	ARHGAP23	Q9P227	1491 aa		32.97	■■■□□ 2.87
SYMPK-208	ENST00000598059	DISP3	Q9P2K9	1392 aa		32.96	■■■□□ 2.87
SYMPK-208	ENST00000598059	PIK3C2B	O00750	1634 aa		32.95	■■■□□ 2.87
SYMPK-208	ENST00000598059	LTK	P29376	864 aa		32.94	■■■□□ 2.86
SYMPK-208	ENST00000598059	ANKRD50	Q9ULJ7	1429 aa		32.94	■■■□□ 2.86
SYMPK-208	ENST00000598059	STRCP1	A6NGW2	1772 aa		32.93	■■■□□ 2.86
SYMPK-208	ENST00000598059	EFCAB6	Q5THR3	1501 aa		32.92	■■■□□ 2.86
SYMPK-208	ENST00000598059	TXNDC2	Q86VQ3	553 aa		32.92	■■■□□ 2.86
SYMPK-208	ENST00000598059	TOM1	O60784	492 aa		32.91	■■■□□ 2.86
SYMPK-208	ENST00000598059	KDM5A	P29375	1690 aa	Known RBP	32.89	■■■□□ 2.86
SYMPK-208	ENST00000598059	SYNM	O15061	1565 aa		32.89	■■■□□ 2.86
SYMPK-208	ENST00000598059	IDI1	Q13907	227 aa		32.89	■■■□□ 2.86
SYMPK-208	ENST00000598059	NOS1	P29475	1434 aa		32.88	■■■□□ 2.85
SYMPK-208	ENST00000598059	STAG3	Q9UJ98	1225 aa		32.88	■■■□□ 2.85
SYMPK-208	ENST00000598059	EID1	Q9Y6B2	187 aa		32.88	■■■□□ 2.85
SYMPK-208	ENST00000598059	TMEM2	Q9UHN6	1383 aa		32.87	■■■□□ 2.85
SYMPK-208	ENST00000598059	PIP4K2B	P78356	416 aa		32.85	■■■□□ 2.85
SYMPK-208	ENST00000598059	SCAF1	Q9H7N4	1312 aa	Known RBP	32.84	■■■□□ 2.85
SYMPK-208	ENST00000598059	LRRC7	Q96NW7	1537 aa		32.84	■■■□□ 2.85
SYMPK-208	ENST00000598059	RPRD2	Q5VT52	1461 aa	Known RBP	32.81	■■■□□ 2.84
SYMPK-208	ENST00000598059	ALK	Q9UM73	1620 aa		32.8	■■■□□ 2.84
SYMPK-208	ENST00000598059	ILDR2	Q71H61	639 aa		32.79	■■■□□ 2.84
SYMPK-208	ENST00000598059	SLC52A1	Q9NWF4	448 aa		32.79	■■■□□ 2.84
SYMPK-208	ENST00000598059	ROCK1	Q13464	1354 aa		32.79	■■■□□ 2.84
SYMPK-208	ENST00000598059	TET3	O43151	1660 aa		32.78	■■■□□ 2.84
SYMPK-208	ENST00000598059	HSPA1L	P34931	641 aa		32.77	■■■□□ 2.84
SYMPK-208	ENST00000598059	ADGRB3	O60242	1522 aa		32.77	■■■□□ 2.84
SYMPK-208	ENST00000598059	UNC13B	O14795	1591 aa		32.76	■■■□□ 2.84
SYMPK-208	ENST00000598059	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.73	■■■□□ 2.83
SYMPK-208	ENST00000598059	GCC2	Q8IWJ2	1684 aa		32.72	■■■□□ 2.83
SYMPK-208	ENST00000598059	ITGAE	P38570	1179 aa		32.67	■■■□□ 2.82
SYMPK-208	ENST00000598059	XIRP1	Q702N8	1843 aa	Known RBP	32.67	■■■□□ 2.82
SYMPK-208	ENST00000598059	MYO5B	Q9ULV0	1848 aa		32.65	■■■□□ 2.82
SYMPK-208	ENST00000598059		E9PCH4	1651 aa		32.64	■■■□□ 2.82
SYMPK-208	ENST00000598059	IQGAP3	Q86VI3	1631 aa		32.64	■■■□□ 2.82
SYMPK-208	ENST00000598059	SLC26A8	Q96RN1	970 aa		32.64	■■■□□ 2.82
SYMPK-208	ENST00000598059	TMEM131L	A2VDJ0	1609 aa		32.61	■■■□□ 2.81
SYMPK-208	ENST00000598059	ZFYVE9	O95405	1425 aa		32.6	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms