RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 FBXO41Q8TF61 875 aa27.97■■■□□ 2.07
CHMP2A-203ENST00000597209 EIF2AK4Q9P2K8 1649 aaKnown RBP27.96■■■□□ 2.07
CHMP2A-203ENST00000597209 ABCC5O15440 1437 aa27.96■■■□□ 2.07
CHMP2A-203ENST00000597209 MYO3AQ8NEV4 1616 aa27.96■■■□□ 2.07
CHMP2A-203ENST00000597209 RNF17Q9BXT8 1623 aaKnown RBP27.96■■■□□ 2.07
CHMP2A-203ENST00000597209 WASHC2CQ9Y4E1 1318 aa27.95■■■□□ 2.07
CHMP2A-203ENST00000597209 PTPRTO14522 1441 aa27.95■■■□□ 2.07
CHMP2A-203ENST00000597209 ZNF142P52746 1687 aaPredicted RBP27.95■■■□□ 2.07
CHMP2A-203ENST00000597209 NCOA1Q15788 1441 aa27.94■■■□□ 2.06
CHMP2A-203ENST00000597209 CROCC2H7BZ55 1655 aa27.94■■■□□ 2.06
CHMP2A-203ENST00000597209 DUOX2Q9NRD8 1548 aa27.93■■■□□ 2.06
CHMP2A-203ENST00000597209 PZPP20742 1482 aa27.93■■■□□ 2.06
CHMP2A-203ENST00000597209 DNMT1P26358 1616 aaKnown RBP27.92■■■□□ 2.06
CHMP2A-203ENST00000597209 DAPK1P53355 1430 aa27.92■■■□□ 2.06
CHMP2A-203ENST00000597209 CAMSAP1Q5T5Y3 1602 aa27.91■■■□□ 2.06
CHMP2A-203ENST00000597209 CEP170BQ9Y4F5 1589 aaPredicted RBP27.9■■■□□ 2.06
CHMP2A-203ENST00000597209 PLA2R1Q13018 1463 aa27.88■■■□□ 2.05
CHMP2A-203ENST00000597209 ZC3H13Q5T200 1668 aaKnown RBP27.87■■■□□ 2.05
CHMP2A-203ENST00000597209 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
CHMP2A-203ENST00000597209 CERKQ8TCT0 537 aa27.86■■■□□ 2.05
CHMP2A-203ENST00000597209 A2ML1A8K2U0 1454 aa27.86■■■□□ 2.05
CHMP2A-203ENST00000597209 TNRQ92752 1358 aa27.86■■■□□ 2.05
CHMP2A-203ENST00000597209 FBXO31Q5XUX0 539 aaPredicted RBP27.85■■■□□ 2.05
CHMP2A-203ENST00000597209 MROH1Q8NDA8 1641 aa27.85■■■□□ 2.05
CHMP2A-203ENST00000597209 ERBINQ96RT1 1412 aa27.84■■■□□ 2.05
CHMP2A-203ENST00000597209 ABCC3O15438 1527 aa27.84■■■□□ 2.05
CHMP2A-203ENST00000597209 PKD2Q13563 968 aa27.82■■■□□ 2.04
CHMP2A-203ENST00000597209 RRP7BPQ9NSQ0 103 aa27.82■■■□□ 2.04
CHMP2A-203ENST00000597209 ANKRD30AQ9BXX3 1397 aa27.8■■■□□ 2.04
CHMP2A-203ENST00000597209 NCKAP5LQ9HCH0 1330 aa27.78■■■□□ 2.04
CHMP2A-203ENST00000597209 NLRP1Q9C000 1473 aa27.77■■■□□ 2.04
CHMP2A-203ENST00000597209 PRDM15P57071 1507 aaPredicted RBP27.77■■■□□ 2.04
CHMP2A-203ENST00000597209 SPATA31D1Q6ZQQ2 1576 aa27.75■■■□□ 2.03
CHMP2A-203ENST00000597209 ADGRL2O95490 1459 aa27.75■■■□□ 2.03
CHMP2A-203ENST00000597209 CHIC2Q9UKJ5 165 aa27.74■■■□□ 2.03
CHMP2A-203ENST00000597209 DEPDC5O75140 1603 aa27.73■■■□□ 2.03
CHMP2A-203ENST00000597209 CEP152O94986 1710 aa27.72■■■□□ 2.03
CHMP2A-203ENST00000597209 FAM50AQ14320 339 aaKnown RBP27.71■■■□□ 2.03
CHMP2A-203ENST00000597209 ARHGAP31Q2M1Z3 1444 aa27.71■■■□□ 2.03
CHMP2A-203ENST00000597209 LTBP4Q8N2S1 1624 aa27.7■■■□□ 2.03
CHMP2A-203ENST00000597209 ERVK-7P63135 1459 aa27.7■■■□□ 2.03
CHMP2A-203ENST00000597209 THEMISQ8N1K5 641 aaPredicted RBP27.69■■■□□ 2.02
CHMP2A-203ENST00000597209 KANK1Q14678 1352 aa27.67■■■□□ 2.02
CHMP2A-203ENST00000597209 UGGT1Q9NYU2 1555 aa27.67■■■□□ 2.02
CHMP2A-203ENST00000597209 LMTK2Q8IWU2 1503 aa27.64■■■□□ 2.02
CHMP2A-203ENST00000597209 VWDEQ8N2E2 1590 aa27.64■■■□□ 2.01
CHMP2A-203ENST00000597209 POLR1AO95602 1720 aaPredicted RBP27.64■■■□□ 2.01
CHMP2A-203ENST00000597209 IQSEC2Q5JU85 1478 aa27.64■■■□□ 2.01
CHMP2A-203ENST00000597209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.63■■■□□ 2.014e-8■■■■□ 21.9
CHMP2A-203ENST00000597209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.62■■■□□ 2.01
CHMP2A-203ENST00000597209 ANKLE2Q86XL3 938 aa27.62■■■□□ 2.01
CHMP2A-203ENST00000597209 NEURL4Q96JN8 1562 aa27.6■■■□□ 2.01
CHMP2A-203ENST00000597209 ANKRD50Q9ULJ7 1429 aa27.58■■■□□ 2.01
CHMP2A-203ENST00000597209 CFAP65Q6ZU64 1925 aaKnown RBP27.58■■■□□ 2.01
CHMP2A-203ENST00000597209 ZNF335Q9H4Z2 1342 aaPredicted RBP27.58■■■□□ 2.01
CHMP2A-203ENST00000597209 MED14O60244 1454 aa27.57■■■□□ 2
CHMP2A-203ENST00000597209 ROCK1Q13464 1354 aa27.55■■■□□ 2
CHMP2A-203ENST00000597209 UBR1Q8IWV7 1749 aa27.53■■■□□ 2
CHMP2A-203ENST00000597209 NPHP4O75161 1426 aaPredicted RBP27.5■■□□□ 1.99
CHMP2A-203ENST00000597209 EFCAB6Q5THR3 1501 aa27.5■■□□□ 1.99
CHMP2A-203ENST00000597209 PPARGC1BQ86YN6 1023 aaKnown RBP27.49■■□□□ 1.99
CHMP2A-203ENST00000597209 NOS1P29475 1434 aa27.47■■□□□ 1.99
CHMP2A-203ENST00000597209 SLIT1O75093 1534 aa27.46■■□□□ 1.99
CHMP2A-203ENST00000597209 ARHGAP23Q9P227 1491 aa27.46■■□□□ 1.99
CHMP2A-203ENST00000597209 RPRD2Q5VT52 1461 aaKnown RBP27.45■■□□□ 1.99
CHMP2A-203ENST00000597209 UNC13BO14795 1591 aa27.45■■□□□ 1.99
CHMP2A-203ENST00000597209 IQGAP1P46940 1657 aa27.45■■□□□ 1.98
CHMP2A-203ENST00000597209 KDM5AP29375 1690 aaKnown RBP27.44■■□□□ 1.98
CHMP2A-203ENST00000597209 PIK3C2BO00750 1634 aa27.44■■□□□ 1.98
CHMP2A-203ENST00000597209 CPS1P31327 1500 aa27.43■■□□□ 1.98
CHMP2A-203ENST00000597209 SYNMO15061 1565 aa27.42■■□□□ 1.98
CHMP2A-203ENST00000597209 TET3O43151 1660 aa27.42■■□□□ 1.98
CHMP2A-203ENST00000597209 SCAF11Q99590 1463 aaKnown RBP27.41■■□□□ 1.98
CHMP2A-203ENST00000597209 IDI1Q13907 227 aa27.41■■□□□ 1.98
CHMP2A-203ENST00000597209 RRBP1Q9P2E9 1410 aaKnown RBP27.4■■□□□ 1.98
CHMP2A-203ENST00000597209 SLC52A1Q9NWF4 448 aa27.39■■□□□ 1.98
CHMP2A-203ENST00000597209 LTKP29376 864 aa27.38■■□□□ 1.97
CHMP2A-203ENST00000597209 TMEM2Q9UHN6 1383 aa27.37■■□□□ 1.97
CHMP2A-203ENST00000597209 GCC2Q8IWJ2 1684 aa27.37■■□□□ 1.97
CHMP2A-203ENST00000597209 ITGAEP38570 1179 aa27.37■■□□□ 1.97
CHMP2A-203ENST00000597209 TXNDC2Q86VQ3 553 aa27.37■■□□□ 1.97
CHMP2A-203ENST00000597209 STAG3Q9UJ98 1225 aa27.37■■□□□ 1.97
CHMP2A-203ENST00000597209 EID1Q9Y6B2 187 aa27.36■■□□□ 1.97
CHMP2A-203ENST00000597209 IQGAP3Q86VI3 1631 aa27.34■■□□□ 1.97
CHMP2A-203ENST00000597209 UBAP1LF5GYI3 381 aa27.32■■□□□ 1.96
CHMP2A-203ENST00000597209 ADGRB3O60242 1522 aa27.31■■□□□ 1.96
CHMP2A-203ENST00000597209 E9PCH4 1651 aa27.28■■□□□ 1.96
CHMP2A-203ENST00000597209 NUP155O75694 1391 aa27.28■■□□□ 1.96
CHMP2A-203ENST00000597209 STRCP1A6NGW2 1772 aa27.26■■□□□ 1.95
CHMP2A-203ENST00000597209 LRRC7Q96NW7 1537 aa27.22■■□□□ 1.95
CHMP2A-203ENST00000597209 TOM1O60784 492 aa27.22■■□□□ 1.95
CHMP2A-203ENST00000597209 TMEM131LA2VDJ0 1609 aa27.2■■□□□ 1.95
CHMP2A-203ENST00000597209 ZFYVE9O95405 1425 aa27.18■■□□□ 1.94
CHMP2A-203ENST00000597209 NAIPQ13075 1403 aa27.18■■□□□ 1.94
CHMP2A-203ENST00000597209 HDGFP51858 240 aaKnown RBP27.18■■□□□ 1.94
CHMP2A-203ENST00000597209 MYO5BQ9ULV0 1848 aa27.16■■□□□ 1.94
CHMP2A-203ENST00000597209 RIMS2Q9UQ26 1411 aa27.14■■□□□ 1.93
CHMP2A-203ENST00000597209 PLEKHG1Q9ULL1 1385 aa27.12■■□□□ 1.93
CHMP2A-203ENST00000597209 HFM1A2PYH4 1435 aa27.12■■□□□ 1.93
CHMP2A-203ENST00000597209 KCNA6P17658 529 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms