RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 TCOF1Q13428 1488 aaKnown RBP33.5■■■□□ 2.95
C19orf54-205ENST00000596809 FBXO31Q5XUX0 539 aaPredicted RBP33.49■■■□□ 2.95
C19orf54-205ENST00000596809 FAM135AQ9P2D6 1515 aa33.48■■■□□ 2.95
C19orf54-205ENST00000596809 DAPK1P53355 1430 aa33.45■■■□□ 2.95
C19orf54-205ENST00000596809 NCOA1Q15788 1441 aa33.45■■■□□ 2.95
C19orf54-205ENST00000596809 SHANK2Q9UPX8 1470 aa33.45■■■□□ 2.95
C19orf54-205ENST00000596809 RRP7BPQ9NSQ0 103 aa33.45■■■□□ 2.95
C19orf54-205ENST00000596809 PTPRTO14522 1441 aa33.44■■■□□ 2.94
C19orf54-205ENST00000596809 DUOX2Q9NRD8 1548 aa33.43■■■□□ 2.94
C19orf54-205ENST00000596809 KIF15Q9NS87 1388 aa33.43■■■□□ 2.94
C19orf54-205ENST00000596809 CERKQ8TCT0 537 aa33.42■■■□□ 2.94
C19orf54-205ENST00000596809 PZPP20742 1482 aa33.42■■■□□ 2.94
C19orf54-205ENST00000596809 CAMSAP1Q5T5Y3 1602 aa33.42■■■□□ 2.94
C19orf54-205ENST00000596809 MYO3AQ8NEV4 1616 aa33.42■■■□□ 2.94
C19orf54-205ENST00000596809 TNRQ92752 1358 aa33.4■■■□□ 2.94
C19orf54-205ENST00000596809 RNF17Q9BXT8 1623 aaKnown RBP33.39■■■□□ 2.94
C19orf54-205ENST00000596809 CHIC2Q9UKJ5 165 aa33.39■■■□□ 2.94
C19orf54-205ENST00000596809 DNMT1P26358 1616 aaKnown RBP33.39■■■□□ 2.93
C19orf54-205ENST00000596809 EIF2AK4Q9P2K8 1649 aaKnown RBP33.39■■■□□ 2.93
C19orf54-205ENST00000596809 CEP170BQ9Y4F5 1589 aaPredicted RBP33.38■■■□□ 2.93
C19orf54-205ENST00000596809 NCKAP5LQ9HCH0 1330 aa33.38■■■□□ 2.93
C19orf54-205ENST00000596809 FAM50AQ14320 339 aaKnown RBP33.37■■■□□ 2.93
C19orf54-205ENST00000596809 CROCC2H7BZ55 1655 aa33.36■■■□□ 2.93
C19orf54-205ENST00000596809 ZNF142P52746 1687 aaPredicted RBP33.36■■■□□ 2.93
C19orf54-205ENST00000596809 A2ML1A8K2U0 1454 aa33.35■■■□□ 2.93
C19orf54-205ENST00000596809 ABCC3O15438 1527 aa33.34■■■□□ 2.93
C19orf54-205ENST00000596809 ANKRD30AQ9BXX3 1397 aa33.34■■■□□ 2.93
C19orf54-205ENST00000596809 ERBINQ96RT1 1412 aa33.33■■■□□ 2.93
C19orf54-205ENST00000596809 PLA2R1Q13018 1463 aa33.32■■■□□ 2.92
C19orf54-205ENST00000596809 PKD2Q13563 968 aa33.32■■■□□ 2.92
C19orf54-205ENST00000596809 MROH1Q8NDA8 1641 aa33.3■■■□□ 2.92
C19orf54-205ENST00000596809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.26■■■□□ 2.91
C19orf54-205ENST00000596809 ZC3H13Q5T200 1668 aaKnown RBP33.26■■■□□ 2.91
C19orf54-205ENST00000596809 NLRP1Q9C000 1473 aa33.23■■■□□ 2.91
C19orf54-205ENST00000596809 THEMISQ8N1K5 641 aaPredicted RBP33.22■■■□□ 2.91
C19orf54-205ENST00000596809 PPARGC1BQ86YN6 1023 aaKnown RBP33.2■■■□□ 2.91
C19orf54-205ENST00000596809 ADGRL2O95490 1459 aa33.19■■■□□ 2.9
C19orf54-205ENST00000596809 PRDM15P57071 1507 aaPredicted RBP33.19■■■□□ 2.9
C19orf54-205ENST00000596809 KANK1Q14678 1352 aa33.18■■■□□ 2.9
C19orf54-205ENST00000596809 ERVK-7P63135 1459 aa33.18■■■□□ 2.9
C19orf54-205ENST00000596809 SPATA31D1Q6ZQQ2 1576 aa33.17■■■□□ 2.9
C19orf54-205ENST00000596809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.16■■■□□ 2.9
C19orf54-205ENST00000596809 CEP152O94986 1710 aa33.16■■■□□ 2.9
C19orf54-205ENST00000596809 ARHGAP31Q2M1Z3 1444 aa33.15■■■□□ 2.9
C19orf54-205ENST00000596809 LTBP4Q8N2S1 1624 aa33.14■■■□□ 2.9
C19orf54-205ENST00000596809 UGGT1Q9NYU2 1555 aa33.14■■■□□ 2.9
C19orf54-205ENST00000596809 ANKLE2Q86XL3 938 aa33.14■■■□□ 2.9
C19orf54-205ENST00000596809 DEPDC5O75140 1603 aa33.13■■■□□ 2.89
C19orf54-205ENST00000596809 ZNF335Q9H4Z2 1342 aaPredicted RBP33.12■■■□□ 2.89
C19orf54-205ENST00000596809 ANKRD50Q9ULJ7 1429 aa33.09■■■□□ 2.89
C19orf54-205ENST00000596809 LMTK2Q8IWU2 1503 aa33.04■■■□□ 2.88
C19orf54-205ENST00000596809 VWDEQ8N2E2 1590 aa33.04■■■□□ 2.88
C19orf54-205ENST00000596809 NEURL4Q96JN8 1562 aa33.01■■■□□ 2.88
C19orf54-205ENST00000596809 CFAP65Q6ZU64 1925 aaKnown RBP33■■■□□ 2.87
C19orf54-205ENST00000596809 ITGAEP38570 1179 aa33■■■□□ 2.87
C19orf54-205ENST00000596809 ROCK1Q13464 1354 aa32.99■■■□□ 2.87
C19orf54-205ENST00000596809 POLR1AO95602 1720 aaPredicted RBP32.98■■■□□ 2.87
C19orf54-205ENST00000596809 IQSEC2Q5JU85 1478 aa32.98■■■□□ 2.87
C19orf54-205ENST00000596809 MED14O60244 1454 aa32.97■■■□□ 2.87
C19orf54-205ENST00000596809 NPHP4O75161 1426 aaPredicted RBP32.96■■■□□ 2.87
C19orf54-205ENST00000596809 IDI1Q13907 227 aa32.92■■■□□ 2.86
C19orf54-205ENST00000596809 EFCAB6Q5THR3 1501 aa32.91■■■□□ 2.86
C19orf54-205ENST00000596809 UBR1Q8IWV7 1749 aa32.91■■■□□ 2.86
C19orf54-205ENST00000596809 STAG3Q9UJ98 1225 aa32.9■■■□□ 2.86
C19orf54-205ENST00000596809 NOS1P29475 1434 aa32.88■■■□□ 2.85
C19orf54-205ENST00000596809 TXNDC2Q86VQ3 553 aa32.88■■■□□ 2.85
C19orf54-205ENST00000596809 LTKP29376 864 aa32.87■■■□□ 2.85
C19orf54-205ENST00000596809 ARHGAP23Q9P227 1491 aa32.86■■■□□ 2.85
C19orf54-205ENST00000596809 EID1Q9Y6B2 187 aa32.85■■■□□ 2.85
C19orf54-205ENST00000596809 SLC52A1Q9NWF4 448 aa32.84■■■□□ 2.85
C19orf54-205ENST00000596809 PIK3C2BO00750 1634 aa32.84■■■□□ 2.85
C19orf54-205ENST00000596809 SLIT1O75093 1534 aa32.83■■■□□ 2.85
C19orf54-205ENST00000596809 RPRD2Q5VT52 1461 aaKnown RBP32.83■■■□□ 2.85
C19orf54-205ENST00000596809 SCAF11Q99590 1463 aaKnown RBP32.83■■■□□ 2.85
C19orf54-205ENST00000596809 RRBP1Q9P2E9 1410 aaKnown RBP32.82■■■□□ 2.84
C19orf54-205ENST00000596809 SYNMO15061 1565 aa32.82■■■□□ 2.84
C19orf54-205ENST00000596809 TMEM2Q9UHN6 1383 aa32.82■■■□□ 2.84
C19orf54-205ENST00000596809 UBAP1LF5GYI3 381 aa32.81■■■□□ 2.84
C19orf54-205ENST00000596809 IQGAP1P46940 1657 aa32.81■■■□□ 2.84
C19orf54-205ENST00000596809 CPS1P31327 1500 aa32.81■■■□□ 2.84
C19orf54-205ENST00000596809 UNC13BO14795 1591 aa32.8■■■□□ 2.84
C19orf54-205ENST00000596809 NUP155O75694 1391 aa32.77■■■□□ 2.84
C19orf54-205ENST00000596809 TET3O43151 1660 aa32.77■■■□□ 2.84
C19orf54-205ENST00000596809 KDM5AP29375 1690 aaKnown RBP32.72■■■□□ 2.83
C19orf54-205ENST00000596809 GCC2Q8IWJ2 1684 aa32.69■■■□□ 2.82
C19orf54-205ENST00000596809 ADGRB3O60242 1522 aa32.68■■■□□ 2.82
C19orf54-205ENST00000596809 IQGAP3Q86VI3 1631 aa32.68■■■□□ 2.82
C19orf54-205ENST00000596809 TOM1O60784 492 aa32.65■■■□□ 2.82
C19orf54-205ENST00000596809 E9PCH4 1651 aa32.63■■■□□ 2.81
C19orf54-205ENST00000596809 CHGAP10645 457 aaKnown RBP32.61■■■□□ 2.81
C19orf54-205ENST00000596809 LRRC7Q96NW7 1537 aa32.61■■■□□ 2.81
C19orf54-205ENST00000596809 NAIPQ13075 1403 aa32.6■■■□□ 2.81
C19orf54-205ENST00000596809 SLC26A8Q96RN1 970 aa32.6■■■□□ 2.81
C19orf54-205ENST00000596809 HDGFP51858 240 aaKnown RBP32.59■■■□□ 2.81
C19orf54-205ENST00000596809 STRCP1A6NGW2 1772 aa32.59■■■□□ 2.81
C19orf54-205ENST00000596809 PIP4K2BP78356 416 aa32.58■■■□□ 2.81
C19orf54-205ENST00000596809 BCANQ96GW7 911 aa32.57■■■□□ 2.8
C19orf54-205ENST00000596809 SCAF1Q9H7N4 1312 aaKnown RBP32.56■■■□□ 2.8
C19orf54-205ENST00000596809 ZFYVE9O95405 1425 aa32.55■■■□□ 2.8
C19orf54-205ENST00000596809 TMEM131LA2VDJ0 1609 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms