RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 TSPY4P0CV99 314 aa25.52■■□□□ 1.68
LIM2-202ENST00000596399 TSPY10P0CW01 314 aa25.52■■□□□ 1.68
LIM2-202ENST00000596399 TCOF1Q13428 1488 aaKnown RBP25.52■■□□□ 1.68
LIM2-202ENST00000596399 WASHC2CQ9Y4E1 1318 aa25.51■■□□□ 1.67
LIM2-202ENST00000596399 A2ML1A8K2U0 1454 aa25.5■■□□□ 1.67
LIM2-202ENST00000596399 DNMT1P26358 1616 aaKnown RBP25.5■■□□□ 1.67
LIM2-202ENST00000596399 PKD2Q13563 968 aa25.5■■□□□ 1.67
LIM2-202ENST00000596399 KDM5DQ9BY66 1539 aa25.5■■□□□ 1.67
LIM2-202ENST00000596399 TNRQ92752 1358 aa25.48■■□□□ 1.67
LIM2-202ENST00000596399 PZPP20742 1482 aa25.47■■□□□ 1.67
LIM2-202ENST00000596399 MYOM3Q5VTT5 1437 aa25.43■■□□□ 1.66
LIM2-202ENST00000596399 MAP3K1Q13233 1512 aa25.42■■□□□ 1.66
LIM2-202ENST00000596399 IQSEC2Q5JU85 1478 aa25.42■■□□□ 1.66
LIM2-202ENST00000596399 MAST1Q9Y2H9 1570 aa25.41■■□□□ 1.66
LIM2-202ENST00000596399 FAM135AQ9P2D6 1515 aa25.4■■□□□ 1.66
LIM2-202ENST00000596399 MIA2Q96PC5 1412 aa25.39■■□□□ 1.66
LIM2-202ENST00000596399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.38■■□□□ 1.65
LIM2-202ENST00000596399 NEURL4Q96JN8 1562 aa25.38■■□□□ 1.65
LIM2-202ENST00000596399 RNF17Q9BXT8 1623 aaKnown RBP25.37■■□□□ 1.65
LIM2-202ENST00000596399 DISP3Q9P2K9 1392 aa25.37■■□□□ 1.65
LIM2-202ENST00000596399 UBAP1LF5GYI3 381 aa25.36■■□□□ 1.65
LIM2-202ENST00000596399 ABCC3O15438 1527 aa25.36■■□□□ 1.65
LIM2-202ENST00000596399 POLR1AO95602 1720 aaPredicted RBP25.34■■□□□ 1.65
LIM2-202ENST00000596399 MROH1Q8NDA8 1641 aa25.34■■□□□ 1.65
LIM2-202ENST00000596399 ILDR2Q71H61 639 aa25.32■■□□□ 1.64
LIM2-202ENST00000596399 NLRP1Q9C000 1473 aa25.32■■□□□ 1.64
LIM2-202ENST00000596399 UGGT1Q9NYU2 1555 aa25.31■■□□□ 1.64
LIM2-202ENST00000596399 EIF2AK4Q9P2K8 1649 aaKnown RBP25.31■■□□□ 1.64
LIM2-202ENST00000596399 THEMISQ8N1K5 641 aaPredicted RBP25.31■■□□□ 1.64
LIM2-202ENST00000596399 ANKLE2Q86XL3 938 aa25.3■■□□□ 1.64
LIM2-202ENST00000596399 CEP152O94986 1710 aa25.29■■□□□ 1.64
LIM2-202ENST00000596399 ABCC5O15440 1437 aa25.29■■□□□ 1.64
LIM2-202ENST00000596399 RRP7BPQ9NSQ0 103 aa25.28■■□□□ 1.64
LIM2-202ENST00000596399 ZC3H13Q5T200 1668 aaKnown RBP25.28■■□□□ 1.64
LIM2-202ENST00000596399 DUOX2Q9NRD8 1548 aa25.27■■□□□ 1.64
LIM2-202ENST00000596399 SPATA31D1Q6ZQQ2 1576 aa25.27■■□□□ 1.64
LIM2-202ENST00000596399 PTPN23Q9H3S7 1636 aa25.27■■□□□ 1.64
LIM2-202ENST00000596399 APLP2Q06481 763 aa25.27■■□□□ 1.64
LIM2-202ENST00000596399 ERVK-7P63135 1459 aa25.27■■□□□ 1.64
LIM2-202ENST00000596399 KIF15Q9NS87 1388 aa25.26■■□□□ 1.63
LIM2-202ENST00000596399 SHANK2Q9UPX8 1470 aa25.25■■□□□ 1.63
LIM2-202ENST00000596399 CFAP65Q6ZU64 1925 aaKnown RBP25.24■■□□□ 1.63
LIM2-202ENST00000596399 CROCC2H7BZ55 1655 aa25.24■■□□□ 1.63
LIM2-202ENST00000596399 NPHP4O75161 1426 aaPredicted RBP25.23■■□□□ 1.63
LIM2-202ENST00000596399 VWDEQ8N2E2 1590 aa25.22■■□□□ 1.63
LIM2-202ENST00000596399 DAPK1P53355 1430 aa25.21■■□□□ 1.63
LIM2-202ENST00000596399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.21■■□□□ 1.63
LIM2-202ENST00000596399 CHIC2Q9UKJ5 165 aa25.21■■□□□ 1.63
LIM2-202ENST00000596399 MED14O60244 1454 aa25.21■■□□□ 1.63
LIM2-202ENST00000596399 FGD6Q6ZV73 1430 aa25.2■■□□□ 1.63
LIM2-202ENST00000596399 DEPDC5O75140 1603 aa25.2■■□□□ 1.62
LIM2-202ENST00000596399 CPS1P31327 1500 aa25.19■■□□□ 1.62
LIM2-202ENST00000596399 PIP4K2BP78356 416 aa25.19■■□□□ 1.62
LIM2-202ENST00000596399 SCAF1Q9H7N4 1312 aaKnown RBP25.18■■□□□ 1.62
LIM2-202ENST00000596399 PRDM15P57071 1507 aaPredicted RBP25.17■■□□□ 1.62
LIM2-202ENST00000596399 ERBINQ96RT1 1412 aa25.17■■□□□ 1.62
LIM2-202ENST00000596399 IQGAP1P46940 1657 aa25.17■■□□□ 1.62
LIM2-202ENST00000596399 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
LIM2-202ENST00000596399 STRCP1A6NGW2 1772 aa25.13■■□□□ 1.61
LIM2-202ENST00000596399 LTKP29376 864 aa25.12■■□□□ 1.61
LIM2-202ENST00000596399 HSPA1LP34931 641 aa25.12■■□□□ 1.61
LIM2-202ENST00000596399 ARHGAP31Q2M1Z3 1444 aa25.12■■□□□ 1.61
LIM2-202ENST00000596399 TOM1O60784 492 aa25.1■■□□□ 1.61
LIM2-202ENST00000596399 ALKQ9UM73 1620 aa25.08■■□□□ 1.61
LIM2-202ENST00000596399 ANKRD30AQ9BXX3 1397 aa25.08■■□□□ 1.61
LIM2-202ENST00000596399 TXNDC2Q86VQ3 553 aa25.07■■□□□ 1.6
LIM2-202ENST00000596399 SOCS7O14512 581 aa25.06■■□□□ 1.6
LIM2-202ENST00000596399 SCAF11Q99590 1463 aaKnown RBP25.06■■□□□ 1.6
LIM2-202ENST00000596399 ARHGAP23Q9P227 1491 aa25.06■■□□□ 1.6
LIM2-202ENST00000596399 LRRC7Q96NW7 1537 aa25.06■■□□□ 1.6
LIM2-202ENST00000596399 KANK1Q14678 1352 aa25.05■■□□□ 1.6
LIM2-202ENST00000596399 PIK3C2BO00750 1634 aa25.05■■□□□ 1.6
LIM2-202ENST00000596399 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
LIM2-202ENST00000596399 SLIT1O75093 1534 aa25.04■■□□□ 1.6
LIM2-202ENST00000596399 SENP3Q9H4L4 574 aaPredicted RBP25.02■■□□□ 1.6
LIM2-202ENST00000596399 IDI1Q13907 227 aa25.01■■□□□ 1.59
LIM2-202ENST00000596399 LMTK2Q8IWU2 1503 aa25.01■■□□□ 1.59
LIM2-202ENST00000596399 TMEM2Q9UHN6 1383 aa24.99■■□□□ 1.59
LIM2-202ENST00000596399 STAG3Q9UJ98 1225 aa24.99■■□□□ 1.59
LIM2-202ENST00000596399 SYNMO15061 1565 aa24.98■■□□□ 1.59
LIM2-202ENST00000596399 ADGRL2O95490 1459 aa24.98■■□□□ 1.59
LIM2-202ENST00000596399 EID1Q9Y6B2 187 aa24.98■■□□□ 1.59
LIM2-202ENST00000596399 EFCAB6Q5THR3 1501 aa24.96■■□□□ 1.59
LIM2-202ENST00000596399 NOS1P29475 1434 aa24.94■■□□□ 1.58
LIM2-202ENST00000596399 MED1Q15648 1581 aaPredicted RBP24.93■■□□□ 1.58
LIM2-202ENST00000596399 ANKRD50Q9ULJ7 1429 aa24.92■■□□□ 1.58
LIM2-202ENST00000596399 SLC26A8Q96RN1 970 aa24.9■■□□□ 1.58
LIM2-202ENST00000596399 XIRP1Q702N8 1843 aaKnown RBP24.9■■□□□ 1.58
LIM2-202ENST00000596399 KDM5AP29375 1690 aaKnown RBP24.88■■□□□ 1.57
LIM2-202ENST00000596399 RBM33Q96EV2 1170 aaKnown RBP24.87■■□□□ 1.57
LIM2-202ENST00000596399 ADGRB3O60242 1522 aa24.86■■□□□ 1.57
LIM2-202ENST00000596399 PPARGC1BQ86YN6 1023 aaKnown RBP24.86■■□□□ 1.57
LIM2-202ENST00000596399 TET3O43151 1660 aa24.85■■□□□ 1.57
LIM2-202ENST00000596399 SLC52A1Q9NWF4 448 aa24.84■■□□□ 1.57
LIM2-202ENST00000596399 TMEM94Q12767 1356 aa24.81■■□□□ 1.56
LIM2-202ENST00000596399 KCNA6P17658 529 aa24.81■■□□□ 1.56
LIM2-202ENST00000596399 BCANQ96GW7 911 aa24.8■■□□□ 1.56
LIM2-202ENST00000596399 RPRD2Q5VT52 1461 aaKnown RBP24.8■■□□□ 1.56
LIM2-202ENST00000596399 MYO5BQ9ULV0 1848 aa24.79■■□□□ 1.56
LIM2-202ENST00000596399 ITGAEP38570 1179 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms