RNA–Protein interactions for RNA: ENST00000596271.1

SAMD4B-204, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-204ENST00000596271 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
SAMD4B-204ENST00000596271 TCOF1Q13428 1488 aaKnown RBP18.63■□□□□ 0.57
SAMD4B-204ENST00000596271 LRRC9Q6ZRR7 1453 aa18.63■□□□□ 0.57
SAMD4B-204ENST00000596271 CLTCQ00610 1675 aaKnown RBP18.63■□□□□ 0.57
SAMD4B-204ENST00000596271 MIA2Q96PC5 1412 aa18.62■□□□□ 0.57
SAMD4B-204ENST00000596271 A2ML1A8K2U0 1454 aa18.62■□□□□ 0.57
SAMD4B-204ENST00000596271 ZNF142P52746 1687 aaPredicted RBP18.62■□□□□ 0.57
SAMD4B-204ENST00000596271 CEP170BQ9Y4F5 1589 aaPredicted RBP18.61■□□□□ 0.57
SAMD4B-204ENST00000596271 WASHC2CQ9Y4E1 1318 aa18.61■□□□□ 0.57
SAMD4B-204ENST00000596271 PZPP20742 1482 aa18.59■□□□□ 0.57
SAMD4B-204ENST00000596271 TNRQ92752 1358 aa18.58■□□□□ 0.57
SAMD4B-204ENST00000596271 NCKAP5LQ9HCH0 1330 aa18.58■□□□□ 0.57
SAMD4B-204ENST00000596271 MYO3AQ8NEV4 1616 aa18.58■□□□□ 0.56
SAMD4B-204ENST00000596271 KDM5DQ9BY66 1539 aa18.58■□□□□ 0.56
SAMD4B-204ENST00000596271 THEMISQ8N1K5 641 aaPredicted RBP18.57■□□□□ 0.56
SAMD4B-204ENST00000596271 NLRP1Q9C000 1473 aa18.55■□□□□ 0.56
SAMD4B-204ENST00000596271 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
SAMD4B-204ENST00000596271 MAST1Q9Y2H9 1570 aa18.55■□□□□ 0.56
SAMD4B-204ENST00000596271 LOC105371045A0A1W2PR82 267 aa18.54■□□□□ 0.56
SAMD4B-204ENST00000596271 ANKLE2Q86XL3 938 aa18.53■□□□□ 0.56
SAMD4B-204ENST00000596271 APLP2Q06481 763 aa18.51■□□□□ 0.55
SAMD4B-204ENST00000596271 FBXO31Q5XUX0 539 aaPredicted RBP18.51■□□□□ 0.55
SAMD4B-204ENST00000596271 DNMT1P26358 1616 aaKnown RBP18.51■□□□□ 0.55
SAMD4B-204ENST00000596271 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
SAMD4B-204ENST00000596271 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
SAMD4B-204ENST00000596271 RNF17Q9BXT8 1623 aaKnown RBP18.48■□□□□ 0.55
SAMD4B-204ENST00000596271 EIF2AK4Q9P2K8 1649 aaKnown RBP18.47■□□□□ 0.55
SAMD4B-204ENST00000596271 MED14O60244 1454 aa18.46■□□□□ 0.55
SAMD4B-204ENST00000596271 CPS1P31327 1500 aa18.45■□□□□ 0.54
SAMD4B-204ENST00000596271 DUOX2Q9NRD8 1548 aa18.45■□□□□ 0.54
SAMD4B-204ENST00000596271 UBAP1LF5GYI3 381 aa18.45■□□□□ 0.54
SAMD4B-204ENST00000596271 SHANK2Q9UPX8 1470 aa18.45■□□□□ 0.54
SAMD4B-204ENST00000596271 ZC3H13Q5T200 1668 aaKnown RBP18.44■□□□□ 0.54
SAMD4B-204ENST00000596271 ABCC3O15438 1527 aa18.44■□□□□ 0.54
SAMD4B-204ENST00000596271 UGGT1Q9NYU2 1555 aa18.43■□□□□ 0.54
SAMD4B-204ENST00000596271 ARHGAP31Q2M1Z3 1444 aa18.43■□□□□ 0.54
SAMD4B-204ENST00000596271 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
SAMD4B-204ENST00000596271 ERBINQ96RT1 1412 aa18.42■□□□□ 0.54
SAMD4B-204ENST00000596271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.42■□□□□ 0.54
SAMD4B-204ENST00000596271 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
SAMD4B-204ENST00000596271 DEPDC5O75140 1603 aa18.41■□□□□ 0.54
SAMD4B-204ENST00000596271 TOM1O60784 492 aa18.41■□□□□ 0.54
SAMD4B-204ENST00000596271 KIF15Q9NS87 1388 aa18.4■□□□□ 0.54
SAMD4B-204ENST00000596271 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
SAMD4B-204ENST00000596271 ABCC5O15440 1437 aa18.39■□□□□ 0.53
SAMD4B-204ENST00000596271 ERVK-7P63135 1459 aa18.39■□□□□ 0.53
SAMD4B-204ENST00000596271 NEURL4Q96JN8 1562 aa18.38■□□□□ 0.53
SAMD4B-204ENST00000596271 POLR1AO95602 1720 aaPredicted RBP18.37■□□□□ 0.53
SAMD4B-204ENST00000596271 KANK1Q14678 1352 aa18.36■□□□□ 0.53
SAMD4B-204ENST00000596271 ANKRD30AQ9BXX3 1397 aa18.36■□□□□ 0.53
SAMD4B-204ENST00000596271 FGD6Q6ZV73 1430 aa18.35■□□□□ 0.53
SAMD4B-204ENST00000596271 MROH1Q8NDA8 1641 aa18.34■□□□□ 0.53
SAMD4B-204ENST00000596271 PRDM15P57071 1507 aaPredicted RBP18.34■□□□□ 0.53
SAMD4B-204ENST00000596271 DAPK1P53355 1430 aa18.33■□□□□ 0.53
SAMD4B-204ENST00000596271 SOCS7O14512 581 aa18.33■□□□□ 0.52
SAMD4B-204ENST00000596271 RRP7BPQ9NSQ0 103 aa18.33■□□□□ 0.52
SAMD4B-204ENST00000596271 PTPN23Q9H3S7 1636 aa18.32■□□□□ 0.52
SAMD4B-204ENST00000596271 VWDEQ8N2E2 1590 aa18.31■□□□□ 0.52
SAMD4B-204ENST00000596271 EID1Q9Y6B2 187 aa18.3■□□□□ 0.52
SAMD4B-204ENST00000596271 ARHGAP23Q9P227 1491 aa18.3■□□□□ 0.52
SAMD4B-204ENST00000596271 SLIT1O75093 1534 aa18.29■□□□□ 0.52
SAMD4B-204ENST00000596271 LMTK2Q8IWU2 1503 aa18.29■□□□□ 0.52
SAMD4B-204ENST00000596271 SCAF11Q99590 1463 aaKnown RBP18.28■□□□□ 0.52
SAMD4B-204ENST00000596271 TXNDC2Q86VQ3 553 aa18.28■□□□□ 0.52
SAMD4B-204ENST00000596271 ILDR2Q71H61 639 aa18.27■□□□□ 0.52
SAMD4B-204ENST00000596271 SLC52A1Q9NWF4 448 aa18.27■□□□□ 0.52
SAMD4B-204ENST00000596271 IQGAP1P46940 1657 aa18.27■□□□□ 0.52
SAMD4B-204ENST00000596271 CROCC2H7BZ55 1655 aa18.26■□□□□ 0.51
SAMD4B-204ENST00000596271 ADGRL2O95490 1459 aa18.26■□□□□ 0.51
SAMD4B-204ENST00000596271 TMEM2Q9UHN6 1383 aa18.25■□□□□ 0.51
SAMD4B-204ENST00000596271 LTKP29376 864 aa18.24■□□□□ 0.51
SAMD4B-204ENST00000596271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.51
SAMD4B-204ENST00000596271 KDM5AP29375 1690 aaKnown RBP18.24■□□□□ 0.51
SAMD4B-204ENST00000596271 UBR1Q8IWV7 1749 aa18.23■□□□□ 0.51
SAMD4B-204ENST00000596271 HSPA1LP34931 641 aa18.23■□□□□ 0.51
SAMD4B-204ENST00000596271 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
SAMD4B-204ENST00000596271 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
SAMD4B-204ENST00000596271 IDI1Q13907 227 aa18.22■□□□□ 0.51
SAMD4B-204ENST00000596271 STAG3Q9UJ98 1225 aa18.22■□□□□ 0.51
SAMD4B-204ENST00000596271 CEP152O94986 1710 aa18.22■□□□□ 0.51
SAMD4B-204ENST00000596271 LRRC7Q96NW7 1537 aa18.22■□□□□ 0.51
SAMD4B-204ENST00000596271 PIP4K2BP78356 416 aa18.21■□□□□ 0.51
SAMD4B-204ENST00000596271 NOS1P29475 1434 aa18.21■□□□□ 0.51
SAMD4B-204ENST00000596271 SYNMO15061 1565 aa18.21■□□□□ 0.51
SAMD4B-204ENST00000596271 HDGFP51858 240 aaKnown RBP18.2■□□□□ 0.5
SAMD4B-204ENST00000596271 CHIC2Q9UKJ5 165 aa18.2■□□□□ 0.5
SAMD4B-204ENST00000596271 CFAP65Q6ZU64 1925 aaKnown RBP18.19■□□□□ 0.5
SAMD4B-204ENST00000596271 ANKRD50Q9ULJ7 1429 aa18.19■□□□□ 0.5
SAMD4B-204ENST00000596271 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
SAMD4B-204ENST00000596271 EFCAB6Q5THR3 1501 aa18.17■□□□□ 0.5
SAMD4B-204ENST00000596271 KCNA6P17658 529 aa18.16■□□□□ 0.5
SAMD4B-204ENST00000596271 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
SAMD4B-204ENST00000596271 ROCK1Q13464 1354 aa18.15■□□□□ 0.5
SAMD4B-204ENST00000596271 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
SAMD4B-204ENST00000596271 ALKQ9UM73 1620 aa18.12■□□□□ 0.49
SAMD4B-204ENST00000596271 FAM135BQ49AJ0 1406 aa18.11■□□□□ 0.49
SAMD4B-204ENST00000596271 STRCP1A6NGW2 1772 aa18.1■□□□□ 0.49
SAMD4B-204ENST00000596271 TET3O43151 1660 aa18.09■□□□□ 0.49
SAMD4B-204ENST00000596271 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.09■□□□□ 0.49
SAMD4B-204ENST00000596271 ADGRB3O60242 1522 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms