RNA–Protein interactions for RNA: ENST00000596271.1

SAMD4B-204, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-204ENST00000596271 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
SAMD4B-204ENST00000596271 CCDC180Q9P1Z9 1646 aa26.39■■□□□ 1.81
SAMD4B-204ENST00000596271 ABCC9O60706 1549 aa26.26■■□□□ 1.79
SAMD4B-204ENST00000596271 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
SAMD4B-204ENST00000596271 NACADO15069 1562 aa25.03■■□□□ 1.6
SAMD4B-204ENST00000596271 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
SAMD4B-204ENST00000596271 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
SAMD4B-204ENST00000596271 DNAJC5BQ9UF47 199 aa24.67■■□□□ 1.54
SAMD4B-204ENST00000596271 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
SAMD4B-204ENST00000596271 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
SAMD4B-204ENST00000596271 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
SAMD4B-204ENST00000596271 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
SAMD4B-204ENST00000596271 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
SAMD4B-204ENST00000596271 BICRAQ9NZM4 1560 aa24.31■■□□□ 1.48
SAMD4B-204ENST00000596271 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
SAMD4B-204ENST00000596271 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
SAMD4B-204ENST00000596271 CC2D2AQ9P2K1 1620 aa23.76■■□□□ 1.39
SAMD4B-204ENST00000596271 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
SAMD4B-204ENST00000596271 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
SAMD4B-204ENST00000596271 NCAPD3P42695 1498 aa23.14■■□□□ 1.29
SAMD4B-204ENST00000596271 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
SAMD4B-204ENST00000596271 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
SAMD4B-204ENST00000596271 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
SAMD4B-204ENST00000596271 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
SAMD4B-204ENST00000596271 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
SAMD4B-204ENST00000596271 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
SAMD4B-204ENST00000596271 CUX2O14529 1486 aa22.83■■□□□ 1.25
SAMD4B-204ENST00000596271 DNAJC5Q9H3Z4 198 aa22.82■■□□□ 1.24
SAMD4B-204ENST00000596271 PEG3Q9GZU2 1588 aa22.78■■□□□ 1.24
SAMD4B-204ENST00000596271 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
SAMD4B-204ENST00000596271 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
SAMD4B-204ENST00000596271 MROH2BQ7Z745 1585 aa22.57■■□□□ 1.2
SAMD4B-204ENST00000596271 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
SAMD4B-204ENST00000596271 NESP48681 1621 aa22.53■■□□□ 1.2
SAMD4B-204ENST00000596271 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
SAMD4B-204ENST00000596271 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
SAMD4B-204ENST00000596271 THOC2Q8NI27 1593 aaKnown RBP22.34■■□□□ 1.17
SAMD4B-204ENST00000596271 WIZO95785 1651 aa22.23■■□□□ 1.15
SAMD4B-204ENST00000596271 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.14
SAMD4B-204ENST00000596271 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
SAMD4B-204ENST00000596271 MRC2Q9UBG0 1479 aa22.19■■□□□ 1.14
SAMD4B-204ENST00000596271 CFTRP13569 1480 aa22.14■■□□□ 1.13
SAMD4B-204ENST00000596271 WDR62O43379 1518 aa22.13■■□□□ 1.13
SAMD4B-204ENST00000596271 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
SAMD4B-204ENST00000596271 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
SAMD4B-204ENST00000596271 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
SAMD4B-204ENST00000596271 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
SAMD4B-204ENST00000596271 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
SAMD4B-204ENST00000596271 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
SAMD4B-204ENST00000596271 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
SAMD4B-204ENST00000596271 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
SAMD4B-204ENST00000596271 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
SAMD4B-204ENST00000596271 TOPBP1Q92547 1522 aa21.64■■□□□ 1.05
SAMD4B-204ENST00000596271 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
SAMD4B-204ENST00000596271 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
SAMD4B-204ENST00000596271 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
SAMD4B-204ENST00000596271 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
SAMD4B-204ENST00000596271 POLA1P09884 1462 aaPredicted RBP21.42■■□□□ 1.02
SAMD4B-204ENST00000596271 TARBP1Q13395 1621 aaKnown RBP21.41■■□□□ 1.02
SAMD4B-204ENST00000596271 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
SAMD4B-204ENST00000596271 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.01
SAMD4B-204ENST00000596271 SOGA1O94964 1423 aa21.37■■□□□ 1.01
SAMD4B-204ENST00000596271 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
SAMD4B-204ENST00000596271 ARHGEF11O15085 1522 aa21.32■■□□□ 1
SAMD4B-204ENST00000596271 RIMBP3CA6NJZ7 1639 aa21.31■■□□□ 1
SAMD4B-204ENST00000596271 RIMBP3BA6NNM3 1639 aa21.31■■□□□ 1
SAMD4B-204ENST00000596271 RIMBP3Q9UFD9 1639 aa21.31■■□□□ 1
SAMD4B-204ENST00000596271 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
SAMD4B-204ENST00000596271 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
SAMD4B-204ENST00000596271 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
SAMD4B-204ENST00000596271 FBLN2P98095 1184 aa21.24■□□□□ 0.99
SAMD4B-204ENST00000596271 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
SAMD4B-204ENST00000596271 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
SAMD4B-204ENST00000596271 CUX1P39880 1505 aa21.21■□□□□ 0.99
SAMD4B-204ENST00000596271 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
SAMD4B-204ENST00000596271 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
SAMD4B-204ENST00000596271 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
SAMD4B-204ENST00000596271 CHD1O14646 1710 aa21.18■□□□□ 0.98
SAMD4B-204ENST00000596271 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.98
SAMD4B-204ENST00000596271 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
SAMD4B-204ENST00000596271 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
SAMD4B-204ENST00000596271 SUPT5HO00267 1087 aaKnown RBP21.1■□□□□ 0.97
SAMD4B-204ENST00000596271 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
SAMD4B-204ENST00000596271 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
SAMD4B-204ENST00000596271 ARAP1Q96P48 1450 aa21.08■□□□□ 0.97
SAMD4B-204ENST00000596271 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
SAMD4B-204ENST00000596271 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
SAMD4B-204ENST00000596271 ABCA5Q8WWZ7 1642 aa20.97■□□□□ 0.95
SAMD4B-204ENST00000596271 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
SAMD4B-204ENST00000596271 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
SAMD4B-204ENST00000596271 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
SAMD4B-204ENST00000596271 BIVM-ERCC5R4GMW8 1640 aa20.89■□□□□ 0.93
SAMD4B-204ENST00000596271 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
SAMD4B-204ENST00000596271 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
SAMD4B-204ENST00000596271 NUP160Q12769 1436 aa20.87■□□□□ 0.93
SAMD4B-204ENST00000596271 ERICH3Q5RHP9 1530 aa20.85■□□□□ 0.93
SAMD4B-204ENST00000596271 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
SAMD4B-204ENST00000596271 CEP170Q5SW79 1584 aa20.71■□□□□ 0.91
SAMD4B-204ENST00000596271 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
SAMD4B-204ENST00000596271 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms