RNA–Protein interactions for RNA: ENST00000595936.1

LRMDA-211, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-211ENST00000595936 CPS1P31327 1500 aa18.84■□□□□ 0.61
LRMDA-211ENST00000595936 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
LRMDA-211ENST00000595936 TOM1O60784 492 aa18.84■□□□□ 0.61
LRMDA-211ENST00000595936 DNMT1P26358 1616 aaKnown RBP18.83■□□□□ 0.61
LRMDA-211ENST00000595936 RSPH4AQ5TD94 716 aa18.83■□□□□ 0.6
LRMDA-211ENST00000595936 TNRQ92752 1358 aa18.81■□□□□ 0.6
LRMDA-211ENST00000595936 EHBP1L1Q8N3D4 1523 aa18.81■□□□□ 0.6
LRMDA-211ENST00000595936 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
LRMDA-211ENST00000595936 TIAM1Q13009 1591 aa18.81■□□□□ 0.6
LRMDA-211ENST00000595936 ZNF644Q9H582 1327 aaPredicted RBP18.8■□□□□ 0.6
LRMDA-211ENST00000595936 PZPP20742 1482 aa18.8■□□□□ 0.6
LRMDA-211ENST00000595936 ANKLE2Q86XL3 938 aa18.79■□□□□ 0.6
LRMDA-211ENST00000595936 THEMISQ8N1K5 641 aaPredicted RBP18.79■□□□□ 0.6
LRMDA-211ENST00000595936 KDM5DQ9BY66 1539 aa18.79■□□□□ 0.6
LRMDA-211ENST00000595936 SHANK2Q9UPX8 1470 aa18.78■□□□□ 0.6
LRMDA-211ENST00000595936 KIF3BO15066 747 aa18.78■□□□□ 0.6
LRMDA-211ENST00000595936 WASHC2CQ9Y4E1 1318 aa18.77■□□□□ 0.6
LRMDA-211ENST00000595936 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
LRMDA-211ENST00000595936 CCDC141Q6ZP82 1450 aa18.77■□□□□ 0.59
LRMDA-211ENST00000595936 NLRP1Q9C000 1473 aa18.77■□□□□ 0.59
LRMDA-211ENST00000595936 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
LRMDA-211ENST00000595936 HSPA1LP34931 641 aa18.76■□□□□ 0.59
LRMDA-211ENST00000595936 POLR1AO95602 1720 aaPredicted RBP18.76■□□□□ 0.59
LRMDA-211ENST00000595936 FBXO31Q5XUX0 539 aaPredicted RBP18.75■□□□□ 0.59
LRMDA-211ENST00000595936 NEURL4Q96JN8 1562 aa18.75■□□□□ 0.59
LRMDA-211ENST00000595936 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
LRMDA-211ENST00000595936 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
LRMDA-211ENST00000595936 MED14O60244 1454 aa18.72■□□□□ 0.59
LRMDA-211ENST00000595936 MED1Q15648 1581 aaPredicted RBP18.72■□□□□ 0.59
LRMDA-211ENST00000595936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.71■□□□□ 0.59
LRMDA-211ENST00000595936 UGGT1Q9NYU2 1555 aa18.71■□□□□ 0.59
LRMDA-211ENST00000595936 NPHP4O75161 1426 aaPredicted RBP18.7■□□□□ 0.58
LRMDA-211ENST00000595936 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
LRMDA-211ENST00000595936 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
LRMDA-211ENST00000595936 DEPDC5O75140 1603 aa18.7■□□□□ 0.58
LRMDA-211ENST00000595936 CAMSAP2Q08AD1 1489 aa18.69■□□□□ 0.58
LRMDA-211ENST00000595936 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
LRMDA-211ENST00000595936 NCOA2Q15596 1464 aa18.67■□□□□ 0.58
LRMDA-211ENST00000595936 ARHGEF5Q12774 1597 aa18.66■□□□□ 0.58
LRMDA-211ENST00000595936 IQGAP1P46940 1657 aa18.62■□□□□ 0.57
LRMDA-211ENST00000595936 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
LRMDA-211ENST00000595936 RNF17Q9BXT8 1623 aaKnown RBP18.6■□□□□ 0.57
LRMDA-211ENST00000595936 SYNMO15061 1565 aa18.59■□□□□ 0.57
LRMDA-211ENST00000595936 ABCC3O15438 1527 aa18.59■□□□□ 0.57
LRMDA-211ENST00000595936 ALKQ9UM73 1620 aa18.59■□□□□ 0.57
LRMDA-211ENST00000595936 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
LRMDA-211ENST00000595936 ERVK-7P63135 1459 aa18.58■□□□□ 0.56
LRMDA-211ENST00000595936 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
LRMDA-211ENST00000595936 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
LRMDA-211ENST00000595936 SCAF11Q99590 1463 aaKnown RBP18.54■□□□□ 0.56
LRMDA-211ENST00000595936 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.55
LRMDA-211ENST00000595936 ARHGAP31Q2M1Z3 1444 aa18.5■□□□□ 0.55
LRMDA-211ENST00000595936 EID1Q9Y6B2 187 aa18.5■□□□□ 0.55
LRMDA-211ENST00000595936 SLIT1O75093 1534 aa18.49■□□□□ 0.55
LRMDA-211ENST00000595936 DUOX2Q9NRD8 1548 aa18.49■□□□□ 0.55
LRMDA-211ENST00000595936 TXNDC2Q86VQ3 553 aa18.49■□□□□ 0.55
LRMDA-211ENST00000595936 ARHGAP23Q9P227 1491 aa18.49■□□□□ 0.55
LRMDA-211ENST00000595936 STRCP1A6NGW2 1772 aa18.49■□□□□ 0.55
LRMDA-211ENST00000595936 MROH1Q8NDA8 1641 aa18.49■□□□□ 0.55
LRMDA-211ENST00000595936 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
LRMDA-211ENST00000595936 UBR1Q8IWV7 1749 aa18.48■□□□□ 0.55
LRMDA-211ENST00000595936 VPS8Q8N3P4 1428 aa18.47■□□□□ 0.55
LRMDA-211ENST00000595936 LTKP29376 864 aa18.46■□□□□ 0.55
LRMDA-211ENST00000595936 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
LRMDA-211ENST00000595936 ERBINQ96RT1 1412 aa18.45■□□□□ 0.54
LRMDA-211ENST00000595936 FAM135BQ49AJ0 1406 aa18.44■□□□□ 0.54
LRMDA-211ENST00000595936 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
LRMDA-211ENST00000595936 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
LRMDA-211ENST00000595936 TMEM2Q9UHN6 1383 aa18.42■□□□□ 0.54
LRMDA-211ENST00000595936 CEP152O94986 1710 aa18.42■□□□□ 0.54
LRMDA-211ENST00000595936 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
LRMDA-211ENST00000595936 KANK1Q14678 1352 aa18.41■□□□□ 0.54
LRMDA-211ENST00000595936 RGS17Q9UGC6 210 aaPredicted RBP18.39■□□□□ 0.53
LRMDA-211ENST00000595936 KCNA6P17658 529 aa18.38■□□□□ 0.53
LRMDA-211ENST00000595936 KDM5AP29375 1690 aaKnown RBP18.38■□□□□ 0.53
LRMDA-211ENST00000595936 KANK4Q5T7N3 995 aaPredicted RBP18.37■□□□□ 0.53
LRMDA-211ENST00000595936 TMEM94Q12767 1356 aa18.37■□□□□ 0.53
LRMDA-211ENST00000595936 CFAP65Q6ZU64 1925 aaKnown RBP18.37■□□□□ 0.53
LRMDA-211ENST00000595936 EFCAB6Q5THR3 1501 aa18.36■□□□□ 0.53
LRMDA-211ENST00000595936 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
LRMDA-211ENST00000595936 ABCC5O15440 1437 aa18.35■□□□□ 0.53
LRMDA-211ENST00000595936 PIK3C2BO00750 1634 aa18.34■□□□□ 0.53
LRMDA-211ENST00000595936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.53
LRMDA-211ENST00000595936 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.53
LRMDA-211ENST00000595936 XIRP1Q702N8 1843 aaKnown RBP18.33■□□□□ 0.53
LRMDA-211ENST00000595936 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.52
LRMDA-211ENST00000595936 IDI1Q13907 227 aa18.32■□□□□ 0.52
LRMDA-211ENST00000595936 PROSER2Q86WR7 435 aaPredicted RBP18.32■□□□□ 0.52
LRMDA-211ENST00000595936 SLC52A1Q9NWF4 448 aa18.31■□□□□ 0.52
LRMDA-211ENST00000595936 CROCC2H7BZ55 1655 aa18.31■□□□□ 0.52
LRMDA-211ENST00000595936 DAPK1P53355 1430 aa18.31■□□□□ 0.52
LRMDA-211ENST00000595936 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
LRMDA-211ENST00000595936 TET3O43151 1660 aa18.3■□□□□ 0.52
LRMDA-211ENST00000595936 APLP2Q06481 763 aa18.29■□□□□ 0.52
LRMDA-211ENST00000595936 MSH6P52701 1360 aa18.29■□□□□ 0.52
LRMDA-211ENST00000595936 PTPN23Q9H3S7 1636 aa18.28■□□□□ 0.52
LRMDA-211ENST00000595936 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
LRMDA-211ENST00000595936 NOS1P29475 1434 aa18.28■□□□□ 0.52
LRMDA-211ENST00000595936 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
LRMDA-211ENST00000595936 HDGFP51858 240 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms