RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 LRRC9Q6ZRR7 1453 aa26.12■■□□□ 1.77
LIG1-205ENST00000593425 PKD2Q13563 968 aa26.12■■□□□ 1.77
LIG1-205ENST00000593425 FAM135AQ9P2D6 1515 aa26.12■■□□□ 1.77
LIG1-205ENST00000593425 PZPP20742 1482 aa26.1■■□□□ 1.77
LIG1-205ENST00000593425 RSPH4AQ5TD94 716 aa26.09■■□□□ 1.77
LIG1-205ENST00000593425 POLR1AO95602 1720 aaPredicted RBP26.08■■□□□ 1.76
LIG1-205ENST00000593425 LOC105371045A0A1W2PR82 267 aa26.07■■□□□ 1.76
LIG1-205ENST00000593425 FBXO31Q5XUX0 539 aaPredicted RBP26.07■■□□□ 1.76
LIG1-205ENST00000593425 TNRQ92752 1358 aa26.07■■□□□ 1.76
LIG1-205ENST00000593425 MAST1Q9Y2H9 1570 aa26.05■■□□□ 1.76
LIG1-205ENST00000593425 NEURL4Q96JN8 1562 aa26.04■■□□□ 1.76
LIG1-205ENST00000593425 DISP3Q9P2K9 1392 aa26.04■■□□□ 1.76
LIG1-205ENST00000593425 RNF17Q9BXT8 1623 aaKnown RBP26.03■■□□□ 1.76
LIG1-205ENST00000593425 WASHC2CQ9Y4E1 1318 aa26.02■■□□□ 1.76
LIG1-205ENST00000593425 TSPY4P0CV99 314 aa26.01■■□□□ 1.75
LIG1-205ENST00000593425 TSPY10P0CW01 314 aa26.01■■□□□ 1.75
LIG1-205ENST00000593425 SPATA31D1Q6ZQQ2 1576 aa26.01■■□□□ 1.75
LIG1-205ENST00000593425 MAP3K1Q13233 1512 aa26■■□□□ 1.75
LIG1-205ENST00000593425 KANK4Q5T7N3 995 aaPredicted RBP26■■□□□ 1.75
LIG1-205ENST00000593425 ZC3H13Q5T200 1668 aaKnown RBP25.98■■□□□ 1.75
LIG1-205ENST00000593425 EIF2AK4Q9P2K8 1649 aaKnown RBP25.98■■□□□ 1.75
LIG1-205ENST00000593425 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
LIG1-205ENST00000593425 ABCC3O15438 1527 aa25.96■■□□□ 1.75
LIG1-205ENST00000593425 MIA2Q96PC5 1412 aa25.96■■□□□ 1.75
LIG1-205ENST00000593425 MROH1Q8NDA8 1641 aa25.96■■□□□ 1.75
LIG1-205ENST00000593425 ILDR2Q71H61 639 aa25.95■■□□□ 1.74
LIG1-205ENST00000593425 NLRP1Q9C000 1473 aa25.95■■□□□ 1.74
LIG1-205ENST00000593425 UBAP1LF5GYI3 381 aa25.94■■□□□ 1.74
LIG1-205ENST00000593425 UGGT1Q9NYU2 1555 aa25.94■■□□□ 1.74
LIG1-205ENST00000593425 CEP152O94986 1710 aa25.93■■□□□ 1.74
LIG1-205ENST00000593425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.93■■□□□ 1.74
LIG1-205ENST00000593425 DEPDC5O75140 1603 aa25.89■■□□□ 1.74
LIG1-205ENST00000593425 CROCC2H7BZ55 1655 aa25.89■■□□□ 1.73
LIG1-205ENST00000593425 CPS1P31327 1500 aa25.88■■□□□ 1.73
LIG1-205ENST00000593425 VWDEQ8N2E2 1590 aa25.87■■□□□ 1.73
LIG1-205ENST00000593425 SHANK2Q9UPX8 1470 aa25.87■■□□□ 1.73
LIG1-205ENST00000593425 DUOX2Q9NRD8 1548 aa25.87■■□□□ 1.73
LIG1-205ENST00000593425 ERVK-7P63135 1459 aa25.86■■□□□ 1.73
LIG1-205ENST00000593425 ANKLE2Q86XL3 938 aa25.86■■□□□ 1.73
LIG1-205ENST00000593425 THEMISQ8N1K5 641 aaPredicted RBP25.86■■□□□ 1.73
LIG1-205ENST00000593425 MED14O60244 1454 aa25.85■■□□□ 1.73
LIG1-205ENST00000593425 NPHP4O75161 1426 aaPredicted RBP25.85■■□□□ 1.73
LIG1-205ENST00000593425 IQGAP1P46940 1657 aa25.84■■□□□ 1.73
LIG1-205ENST00000593425 PTPN23Q9H3S7 1636 aa25.84■■□□□ 1.73
LIG1-205ENST00000593425 CFAP65Q6ZU64 1925 aaKnown RBP25.82■■□□□ 1.72
LIG1-205ENST00000593425 PRDM15P57071 1507 aaPredicted RBP25.81■■□□□ 1.72
LIG1-205ENST00000593425 ABCC5O15440 1437 aa25.8■■□□□ 1.72
LIG1-205ENST00000593425 UBR1Q8IWV7 1749 aa25.8■■□□□ 1.72
LIG1-205ENST00000593425 STRCP1A6NGW2 1772 aa25.78■■□□□ 1.72
LIG1-205ENST00000593425 KIF15Q9NS87 1388 aa25.78■■□□□ 1.72
LIG1-205ENST00000593425 SOCS7O14512 581 aa25.76■■□□□ 1.71
LIG1-205ENST00000593425 ERBINQ96RT1 1412 aa25.76■■□□□ 1.71
LIG1-205ENST00000593425 DAPK1P53355 1430 aa25.75■■□□□ 1.71
LIG1-205ENST00000593425 ALKQ9UM73 1620 aa25.74■■□□□ 1.71
LIG1-205ENST00000593425 SCAF1Q9H7N4 1312 aaKnown RBP25.73■■□□□ 1.71
LIG1-205ENST00000593425 PIP4K2BP78356 416 aa25.72■■□□□ 1.71
LIG1-205ENST00000593425 RRP7BPQ9NSQ0 103 aa25.72■■□□□ 1.71
LIG1-205ENST00000593425 ARHGAP31Q2M1Z3 1444 aa25.71■■□□□ 1.71
LIG1-205ENST00000593425 FGD6Q6ZV73 1430 aa25.71■■□□□ 1.71
LIG1-205ENST00000593425 TOM1O60784 492 aa25.7■■□□□ 1.7
LIG1-205ENST00000593425 HSPA1LP34931 641 aa25.7■■□□□ 1.7
LIG1-205ENST00000593425 SYNMO15061 1565 aa25.69■■□□□ 1.7
LIG1-205ENST00000593425 APLP2Q06481 763 aa25.69■■□□□ 1.7
LIG1-205ENST00000593425 SCAF11Q99590 1463 aaKnown RBP25.68■■□□□ 1.7
LIG1-205ENST00000593425 SLIT1O75093 1534 aa25.68■■□□□ 1.7
LIG1-205ENST00000593425 LRRC7Q96NW7 1537 aa25.68■■□□□ 1.7
LIG1-205ENST00000593425 ARHGAP23Q9P227 1491 aa25.67■■□□□ 1.7
LIG1-205ENST00000593425 PIK3C2BO00750 1634 aa25.67■■□□□ 1.7
LIG1-205ENST00000593425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.65■■□□□ 1.72e-7■■■■■ 32.7
LIG1-205ENST00000593425 MED1Q15648 1581 aaPredicted RBP25.65■■□□□ 1.7
LIG1-205ENST00000593425 LTKP29376 864 aa25.62■■□□□ 1.69
LIG1-205ENST00000593425 LMTK2Q8IWU2 1503 aa25.62■■□□□ 1.69
LIG1-205ENST00000593425 CHIC2Q9UKJ5 165 aa25.61■■□□□ 1.69
LIG1-205ENST00000593425 KANK1Q14678 1352 aa25.6■■□□□ 1.69
LIG1-205ENST00000593425 ANKRD30AQ9BXX3 1397 aa25.6■■□□□ 1.69
LIG1-205ENST00000593425 TXNDC2Q86VQ3 553 aa25.58■■□□□ 1.69
LIG1-205ENST00000593425 XIRP1Q702N8 1843 aaKnown RBP25.58■■□□□ 1.68
LIG1-205ENST00000593425 KDM5AP29375 1690 aaKnown RBP25.58■■□□□ 1.68
LIG1-205ENST00000593425 EFCAB6Q5THR3 1501 aa25.56■■□□□ 1.68
LIG1-205ENST00000593425 ADGRL2O95490 1459 aa25.55■■□□□ 1.68
LIG1-205ENST00000593425 TMEM2Q9UHN6 1383 aa25.55■■□□□ 1.68
LIG1-205ENST00000593425 EID1Q9Y6B2 187 aa25.51■■□□□ 1.67
LIG1-205ENST00000593425 NOS1P29475 1434 aa25.51■■□□□ 1.67
LIG1-205ENST00000593425 IDI1Q13907 227 aa25.5■■□□□ 1.67
LIG1-205ENST00000593425 ADGRB3O60242 1522 aa25.49■■□□□ 1.67
LIG1-205ENST00000593425 STAG3Q9UJ98 1225 aa25.49■■□□□ 1.67
LIG1-205ENST00000593425 SENP3Q9H4L4 574 aaPredicted RBP25.48■■□□□ 1.67
LIG1-205ENST00000593425 TET3O43151 1660 aa25.45■■□□□ 1.67
LIG1-205ENST00000593425 FAM50AQ14320 339 aaKnown RBP25.45■■□□□ 1.66
LIG1-205ENST00000593425 ANKRD50Q9ULJ7 1429 aa25.44■■□□□ 1.66
LIG1-205ENST00000593425 MYO5BQ9ULV0 1848 aa25.42■■□□□ 1.66
LIG1-205ENST00000593425 RPRD2Q5VT52 1461 aaKnown RBP25.4■■□□□ 1.66
LIG1-205ENST00000593425 GCC2Q8IWJ2 1684 aa25.4■■□□□ 1.66
LIG1-205ENST00000593425 UNC13BO14795 1591 aa25.39■■□□□ 1.65
LIG1-205ENST00000593425 SLC26A8Q96RN1 970 aa25.38■■□□□ 1.65
LIG1-205ENST00000593425 TMEM94Q12767 1356 aa25.38■■□□□ 1.65
LIG1-205ENST00000593425 NWD1Q149M9 1564 aa25.38■■□□□ 1.65
LIG1-205ENST00000593425 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
LIG1-205ENST00000593425 SLC52A1Q9NWF4 448 aa25.36■■□□□ 1.65
LIG1-205ENST00000593425 KCNA6P17658 529 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms