RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 MED1Q15648 1581 aaPredicted RBP21.05■□□□□ 0.96
H3F3B-213ENST00000593254 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
H3F3B-213ENST00000593254 NEURL4Q96JN8 1562 aa21.03■□□□□ 0.96
H3F3B-213ENST00000593254 HSPA1LP34931 641 aa21.03■□□□□ 0.96
H3F3B-213ENST00000593254 CPS1P31327 1500 aa21.03■□□□□ 0.96
H3F3B-213ENST00000593254 MSH5O43196 834 aa21.01■□□□□ 0.95
H3F3B-213ENST00000593254 NCOA2Q15596 1464 aa21■□□□□ 0.95
H3F3B-213ENST00000593254 MBD5Q9P267 1494 aa20.99■□□□□ 0.95
H3F3B-213ENST00000593254 SHANK2Q9UPX8 1470 aa20.99■□□□□ 0.95
H3F3B-213ENST00000593254 TOM1O60784 492 aa20.98■□□□□ 0.95
H3F3B-213ENST00000593254 RTEL1-TNFRSF6BF6WH68 1400 aa20.97■□□□□ 0.95
H3F3B-213ENST00000593254 PIP4K2BP78356 416 aa20.96■□□□□ 0.95
H3F3B-213ENST00000593254 DHX29Q7Z478 1369 aaKnown RBP20.96■□□□□ 0.95
H3F3B-213ENST00000593254 MAP3K1Q13233 1512 aa20.95■□□□□ 0.94
H3F3B-213ENST00000593254 ALKQ9UM73 1620 aa20.95■□□□□ 0.94
H3F3B-213ENST00000593254 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
H3F3B-213ENST00000593254 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.94
H3F3B-213ENST00000593254 TNRQ92752 1358 aa20.95■□□□□ 0.94
H3F3B-213ENST00000593254 PZPP20742 1482 aa20.94■□□□□ 0.94
H3F3B-213ENST00000593254 LRRC9Q6ZRR7 1453 aa20.94■□□□□ 0.94
H3F3B-213ENST00000593254 VWDEQ8N2E2 1590 aa20.94■□□□□ 0.94
H3F3B-213ENST00000593254 FAM135AQ9P2D6 1515 aa20.94■□□□□ 0.94
H3F3B-213ENST00000593254 FBXO31Q5XUX0 539 aaPredicted RBP20.93■□□□□ 0.94
H3F3B-213ENST00000593254 KDM5DQ9BY66 1539 aa20.92■□□□□ 0.94
H3F3B-213ENST00000593254 MED14O60244 1454 aa20.9■□□□□ 0.94
H3F3B-213ENST00000593254 CAMSAP2Q08AD1 1489 aa20.9■□□□□ 0.94
H3F3B-213ENST00000593254 DEPDC5O75140 1603 aa20.89■□□□□ 0.94
H3F3B-213ENST00000593254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.937e-39■□□□□ 9.5
H3F3B-213ENST00000593254 ANKLE2Q86XL3 938 aa20.89■□□□□ 0.93
H3F3B-213ENST00000593254 KIF3BO15066 747 aa20.87■□□□□ 0.93
H3F3B-213ENST00000593254 CCDC141Q6ZP82 1450 aa20.87■□□□□ 0.93
H3F3B-213ENST00000593254 NLRP1Q9C000 1473 aa20.87■□□□□ 0.93
H3F3B-213ENST00000593254 MIA2Q96PC5 1412 aa20.87■□□□□ 0.93
H3F3B-213ENST00000593254 THEMISQ8N1K5 641 aaPredicted RBP20.86■□□□□ 0.93
H3F3B-213ENST00000593254 PIAS4Q8N2W9 510 aaPredicted RBP20.86■□□□□ 0.93
H3F3B-213ENST00000593254 NPHP4O75161 1426 aaPredicted RBP20.86■□□□□ 0.93
H3F3B-213ENST00000593254 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
H3F3B-213ENST00000593254 KANK4Q5T7N3 995 aaPredicted RBP20.85■□□□□ 0.93
H3F3B-213ENST00000593254 STRCP1A6NGW2 1772 aa20.84■□□□□ 0.93
H3F3B-213ENST00000593254 ARHGEF5Q12774 1597 aa20.84■□□□□ 0.93
H3F3B-213ENST00000593254 IQGAP1P46940 1657 aa20.83■□□□□ 0.93
H3F3B-213ENST00000593254 WASHC2CQ9Y4E1 1318 aa20.83■□□□□ 0.93
H3F3B-213ENST00000593254 RSPH4AQ5TD94 716 aa20.81■□□□□ 0.92
H3F3B-213ENST00000593254 LRRC7Q96NW7 1537 aa20.8■□□□□ 0.92
H3F3B-213ENST00000593254 MYOM3Q5VTT5 1437 aa20.78■□□□□ 0.92
H3F3B-213ENST00000593254 RNF17Q9BXT8 1623 aaKnown RBP20.78■□□□□ 0.92
H3F3B-213ENST00000593254 SYNMO15061 1565 aa20.78■□□□□ 0.92
H3F3B-213ENST00000593254 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
H3F3B-213ENST00000593254 ZC3H13Q5T200 1668 aaKnown RBP20.74■□□□□ 0.91
H3F3B-213ENST00000593254 MAST1Q9Y2H9 1570 aa20.74■□□□□ 0.91
H3F3B-213ENST00000593254 APLP2Q06481 763 aa20.73■□□□□ 0.91
H3F3B-213ENST00000593254 ABCC3O15438 1527 aa20.73■□□□□ 0.91
H3F3B-213ENST00000593254 ADRA2BP18089 450 aa20.72■□□□□ 0.91
H3F3B-213ENST00000593254 TSPY4P0CV99 314 aa20.71■□□□□ 0.91
H3F3B-213ENST00000593254 TSPY10P0CW01 314 aa20.71■□□□□ 0.91
H3F3B-213ENST00000593254 ERVK-7P63135 1459 aa20.7■□□□□ 0.9
H3F3B-213ENST00000593254 RGS17Q9UGC6 210 aaPredicted RBP20.69■□□□□ 0.9
H3F3B-213ENST00000593254 UBR1Q8IWV7 1749 aa20.69■□□□□ 0.9
H3F3B-213ENST00000593254 XIRP1Q702N8 1843 aaKnown RBP20.68■□□□□ 0.9
H3F3B-213ENST00000593254 MROH1Q8NDA8 1641 aa20.67■□□□□ 0.9
H3F3B-213ENST00000593254 PTPN23Q9H3S7 1636 aa20.67■□□□□ 0.9
H3F3B-213ENST00000593254 EIF2AK4Q9P2K8 1649 aaKnown RBP20.66■□□□□ 0.9
H3F3B-213ENST00000593254 CFAP65Q6ZU64 1925 aaKnown RBP20.66■□□□□ 0.9
H3F3B-213ENST00000593254 CROCC2H7BZ55 1655 aa20.65■□□□□ 0.9
H3F3B-213ENST00000593254 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
H3F3B-213ENST00000593254 ARHGAP23Q9P227 1491 aa20.63■□□□□ 0.89
H3F3B-213ENST00000593254 FGD6Q6ZV73 1430 aa20.63■□□□□ 0.89
H3F3B-213ENST00000593254 SLIT1O75093 1534 aa20.63■□□□□ 0.89
H3F3B-213ENST00000593254 CEP152O94986 1710 aa20.62■□□□□ 0.89
H3F3B-213ENST00000593254 LTKP29376 864 aa20.61■□□□□ 0.89
H3F3B-213ENST00000593254 ABCC5O15440 1437 aa20.6■□□□□ 0.89
H3F3B-213ENST00000593254 DUOX2Q9NRD8 1548 aa20.58■□□□□ 0.89
H3F3B-213ENST00000593254 FAM135BQ49AJ0 1406 aa20.58■□□□□ 0.88
H3F3B-213ENST00000593254 DAPK1P53355 1430 aa20.57■□□□□ 0.88
H3F3B-213ENST00000593254 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
H3F3B-213ENST00000593254 ARHGAP31Q2M1Z3 1444 aa20.55■□□□□ 0.88
H3F3B-213ENST00000593254 POTEAQ6S8J7 498 aa20.53■□□□□ 0.88
H3F3B-213ENST00000593254 KIF15Q9NS87 1388 aa20.53■□□□□ 0.88
H3F3B-213ENST00000593254 PRDM15P57071 1507 aaPredicted RBP20.53■□□□□ 0.88
H3F3B-213ENST00000593254 ERBINQ96RT1 1412 aa20.52■□□□□ 0.87
H3F3B-213ENST00000593254 PIK3C2BO00750 1634 aa20.51■□□□□ 0.87
H3F3B-213ENST00000593254 EID1Q9Y6B2 187 aa20.5■□□□□ 0.87
H3F3B-213ENST00000593254 TMEM94Q12767 1356 aa20.49■□□□□ 0.87
H3F3B-213ENST00000593254 TMEM2Q9UHN6 1383 aa20.49■□□□□ 0.87
H3F3B-213ENST00000593254 KDM5AP29375 1690 aaKnown RBP20.49■□□□□ 0.87
H3F3B-213ENST00000593254 ROBO1Q9Y6N7 1651 aa20.49■□□□□ 0.87
H3F3B-213ENST00000593254 RRP7BPQ9NSQ0 103 aa20.47■□□□□ 0.87
H3F3B-213ENST00000593254 TET3O43151 1660 aa20.46■□□□□ 0.87
H3F3B-213ENST00000593254 ANKRD30AQ9BXX3 1397 aa20.46■□□□□ 0.87
H3F3B-213ENST00000593254 KCNA6P17658 529 aa20.45■□□□□ 0.86
H3F3B-213ENST00000593254 ADGRL2O95490 1459 aa20.44■□□□□ 0.86
H3F3B-213ENST00000593254 EFCAB6Q5THR3 1501 aa20.43■□□□□ 0.86
H3F3B-213ENST00000593254 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
H3F3B-213ENST00000593254 NWD1Q149M9 1564 aa20.42■□□□□ 0.86
H3F3B-213ENST00000593254 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
H3F3B-213ENST00000593254 SETD1AO15047 1707 aaKnown RBP20.4■□□□□ 0.86
H3F3B-213ENST00000593254 NKTRP30414 1462 aaKnown RBP20.4■□□□□ 0.86
H3F3B-213ENST00000593254 IDI1Q13907 227 aa20.39■□□□□ 0.85
H3F3B-213ENST00000593254 PROSER2Q86WR7 435 aaPredicted RBP20.39■□□□□ 0.85
H3F3B-213ENST00000593254 LMTK2Q8IWU2 1503 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms