RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 MYO3AQ8NEV4 1616 aa34.43■■■■□ 3.1
PTPN2-215ENST00000592776 PTPN23Q9H3S7 1636 aa34.41■■■■□ 3.1
PTPN2-215ENST00000592776 KDM5DQ9BY66 1539 aa34.4■■■■□ 3.1
PTPN2-215ENST00000592776 PTPRTO14522 1441 aa34.39■■■■□ 3.1
PTPN2-215ENST00000592776 NCKAP5LQ9HCH0 1330 aa34.39■■■■□ 3.1
PTPN2-215ENST00000592776 ABCC5O15440 1437 aa34.38■■■■□ 3.09
PTPN2-215ENST00000592776 CEP170BQ9Y4F5 1589 aaPredicted RBP34.36■■■■□ 3.09
PTPN2-215ENST00000592776 FGD6Q6ZV73 1430 aa34.35■■■■□ 3.09
PTPN2-215ENST00000592776 ZNF142P52746 1687 aaPredicted RBP34.35■■■■□ 3.09
PTPN2-215ENST00000592776 PZPP20742 1482 aa34.32■■■■□ 3.08
PTPN2-215ENST00000592776 RRP7BPQ9NSQ0 103 aa34.31■■■■□ 3.08
PTPN2-215ENST00000592776 TNRQ92752 1358 aa34.31■■■■□ 3.08
PTPN2-215ENST00000592776 RNF17Q9BXT8 1623 aaKnown RBP34.3■■■■□ 3.08
PTPN2-215ENST00000592776 FAM135AQ9P2D6 1515 aa34.3■■■■□ 3.08
PTPN2-215ENST00000592776 TCOF1Q13428 1488 aaKnown RBP34.29■■■■□ 3.08
PTPN2-215ENST00000592776 DAPK1P53355 1430 aa34.29■■■■□ 3.08
PTPN2-215ENST00000592776 A2ML1A8K2U0 1454 aa34.28■■■■□ 3.08
PTPN2-215ENST00000592776 CROCC2H7BZ55 1655 aa34.28■■■■□ 3.08
PTPN2-215ENST00000592776 DUOX2Q9NRD8 1548 aa34.27■■■■□ 3.08
PTPN2-215ENST00000592776 KIF15Q9NS87 1388 aa34.26■■■■□ 3.08
PTPN2-215ENST00000592776 CHIC2Q9UKJ5 165 aa34.26■■■■□ 3.08
PTPN2-215ENST00000592776 EIF2AK4Q9P2K8 1649 aaKnown RBP34.26■■■■□ 3.07
PTPN2-215ENST00000592776 ABCC3O15438 1527 aa34.25■■■■□ 3.07
PTPN2-215ENST00000592776 DNMT1P26358 1616 aaKnown RBP34.25■■■■□ 3.07
PTPN2-215ENST00000592776 MROH1Q8NDA8 1641 aa34.25■■■■□ 3.07
PTPN2-215ENST00000592776 SHANK2Q9UPX8 1470 aa34.25■■■■□ 3.07
PTPN2-215ENST00000592776 PLA2R1Q13018 1463 aa34.23■■■■□ 3.07
PTPN2-215ENST00000592776 PKD2Q13563 968 aa34.2■■■■□ 3.07
PTPN2-215ENST00000592776 LTBP4Q8N2S1 1624 aa34.19■■■■□ 3.06
PTPN2-215ENST00000592776 CEP152O94986 1710 aa34.17■■■■□ 3.06
PTPN2-215ENST00000592776 FAM50AQ14320 339 aaKnown RBP34.17■■■■□ 3.06
PTPN2-215ENST00000592776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.15■■■■□ 3.06
PTPN2-215ENST00000592776 ZC3H13Q5T200 1668 aaKnown RBP34.15■■■■□ 3.06
PTPN2-215ENST00000592776 ZNF335Q9H4Z2 1342 aaPredicted RBP34.14■■■■□ 3.06
PTPN2-215ENST00000592776 ERBINQ96RT1 1412 aa34.13■■■■□ 3.05
PTPN2-215ENST00000592776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.11■■■■□ 3.05
PTPN2-215ENST00000592776 ANKRD30AQ9BXX3 1397 aa34.11■■■■□ 3.05
PTPN2-215ENST00000592776 ERVK-7P63135 1459 aa34.09■■■■□ 3.05
PTPN2-215ENST00000592776 NLRP1Q9C000 1473 aa34.09■■■■□ 3.05
PTPN2-215ENST00000592776 SPATA31D1Q6ZQQ2 1576 aa34.08■■■■□ 3.05
PTPN2-215ENST00000592776 PPARGC1BQ86YN6 1023 aaKnown RBP34.08■■■■□ 3.05
PTPN2-215ENST00000592776 CFAP65Q6ZU64 1925 aaKnown RBP34.08■■■■□ 3.05
PTPN2-215ENST00000592776 UGGT1Q9NYU2 1555 aa34.06■■■■□ 3.04
PTPN2-215ENST00000592776 PRDM15P57071 1507 aaPredicted RBP34.06■■■■□ 3.04
PTPN2-215ENST00000592776 THEMISQ8N1K5 641 aaPredicted RBP34.06■■■■□ 3.04
PTPN2-215ENST00000592776 NEURL4Q96JN8 1562 aa34.03■■■■□ 3.04
PTPN2-215ENST00000592776 ANKLE2Q86XL3 938 aa34.02■■■■□ 3.04
PTPN2-215ENST00000592776 POLR1AO95602 1720 aaPredicted RBP34.01■■■■□ 3.03
PTPN2-215ENST00000592776 DEPDC5O75140 1603 aa34.01■■■■□ 3.03
PTPN2-215ENST00000592776 ADGRL2O95490 1459 aa33.99■■■■□ 3.03
PTPN2-215ENST00000592776 KANK1Q14678 1352 aa33.97■■■■□ 3.03
PTPN2-215ENST00000592776 ARHGAP31Q2M1Z3 1444 aa33.96■■■■□ 3.03
PTPN2-215ENST00000592776 IQSEC2Q5JU85 1478 aa33.91■■■■□ 3.02
PTPN2-215ENST00000592776 VWDEQ8N2E2 1590 aa33.89■■■■□ 3.02
PTPN2-215ENST00000592776 NPHP4O75161 1426 aaPredicted RBP33.89■■■■□ 3.02
PTPN2-215ENST00000592776 ANKRD50Q9ULJ7 1429 aa33.87■■■■□ 3.01
PTPN2-215ENST00000592776 UBR1Q8IWV7 1749 aa33.87■■■■□ 3.01
PTPN2-215ENST00000592776 LMTK2Q8IWU2 1503 aa33.86■■■■□ 3.01
PTPN2-215ENST00000592776 MED14O60244 1454 aa33.86■■■■□ 3.01
PTPN2-215ENST00000592776 ITGAEP38570 1179 aa33.84■■■■□ 3.01
PTPN2-215ENST00000592776 UBAP1LF5GYI3 381 aa33.82■■■■□ 3
PTPN2-215ENST00000592776 LTKP29376 864 aa33.81■■■■□ 3
PTPN2-215ENST00000592776 PIK3C2BO00750 1634 aa33.79■■■■□ 3
PTPN2-215ENST00000592776 IDI1Q13907 227 aa33.79■■■■□ 3
PTPN2-215ENST00000592776 IQGAP1P46940 1657 aa33.79■■■■□ 3
PTPN2-215ENST00000592776 EFCAB6Q5THR3 1501 aa33.78■■■■□ 3
PTPN2-215ENST00000592776 TXNDC2Q86VQ3 553 aa33.77■■■■□ 3
PTPN2-215ENST00000592776 SYNMO15061 1565 aa33.76■■■□□ 2.99
PTPN2-215ENST00000592776 STAG3Q9UJ98 1225 aa33.75■■■□□ 2.99
PTPN2-215ENST00000592776 ARHGAP23Q9P227 1491 aa33.75■■■□□ 2.99
PTPN2-215ENST00000592776 SCAF11Q99590 1463 aaKnown RBP33.74■■■□□ 2.99
PTPN2-215ENST00000592776 NOS1P29475 1434 aa33.73■■■□□ 2.99
PTPN2-215ENST00000592776 SLIT1O75093 1534 aa33.73■■■□□ 2.99
PTPN2-215ENST00000592776 CPS1P31327 1500 aa33.73■■■□□ 2.99
PTPN2-215ENST00000592776 ROCK1Q13464 1354 aa33.72■■■□□ 2.99
PTPN2-215ENST00000592776 TMEM2Q9UHN6 1383 aa33.68■■■□□ 2.98
PTPN2-215ENST00000592776 STRCP1A6NGW2 1772 aa33.67■■■□□ 2.98
PTPN2-215ENST00000592776 EID1Q9Y6B2 187 aa33.67■■■□□ 2.98
PTPN2-215ENST00000592776 UNC13BO14795 1591 aa33.66■■■□□ 2.98
PTPN2-215ENST00000592776 TET3O43151 1660 aa33.64■■■□□ 2.98
PTPN2-215ENST00000592776 SLC52A1Q9NWF4 448 aa33.61■■■□□ 2.97
PTPN2-215ENST00000592776 PIP4K2BP78356 416 aa33.6■■■□□ 2.97
PTPN2-215ENST00000592776 RPRD2Q5VT52 1461 aaKnown RBP33.6■■■□□ 2.97
PTPN2-215ENST00000592776 SCAF1Q9H7N4 1312 aaKnown RBP33.59■■■□□ 2.97
PTPN2-215ENST00000592776 ADGRB3O60242 1522 aa33.58■■■□□ 2.97
PTPN2-215ENST00000592776 KDM5AP29375 1690 aaKnown RBP33.58■■■□□ 2.97
PTPN2-215ENST00000592776 LRRC7Q96NW7 1537 aa33.57■■■□□ 2.96
PTPN2-215ENST00000592776 GCC2Q8IWJ2 1684 aa33.56■■■□□ 2.96
PTPN2-215ENST00000592776 TOM1O60784 492 aa33.56■■■□□ 2.96
PTPN2-215ENST00000592776 SENP3Q9H4L4 574 aaPredicted RBP33.56■■■□□ 2.96
PTPN2-215ENST00000592776 NUP155O75694 1391 aa33.56■■■□□ 2.96
PTPN2-215ENST00000592776 E9PCH4 1651 aa33.54■■■□□ 2.96
PTPN2-215ENST00000592776 RRBP1Q9P2E9 1410 aaKnown RBP33.53■■■□□ 2.96
PTPN2-215ENST00000592776 SLC26A8Q96RN1 970 aa33.52■■■□□ 2.96
PTPN2-215ENST00000592776 IQGAP3Q86VI3 1631 aa33.52■■■□□ 2.96
PTPN2-215ENST00000592776 DISP3Q9P2K9 1392 aa33.5■■■□□ 2.95
PTPN2-215ENST00000592776 ALKQ9UM73 1620 aa33.5■■■□□ 2.95
PTPN2-215ENST00000592776 CHGAP10645 457 aaKnown RBP33.49■■■□□ 2.95
PTPN2-215ENST00000592776 MYO5BQ9ULV0 1848 aa33.49■■■□□ 2.95
PTPN2-215ENST00000592776 HSPA1LP34931 641 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms