RNA–Protein interactions for RNA: ENST00000592385.5

HDAC5-211, Transcript of histone deacetylase 5, humanhuman

TSL 5

Gene HDAC5, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-211ENST00000592385 DCAF11Q8TEB1 546 aa20.86■□□□□ 0.93
HDAC5-211ENST00000592385 CCDC144AA2RUR9 1427 aa20.86■□□□□ 0.93
HDAC5-211ENST00000592385 TRPM1Q7Z4N2 1603 aa20.85■□□□□ 0.93
HDAC5-211ENST00000592385 ERCC6L2Q5T890 1561 aa20.84■□□□□ 0.93
HDAC5-211ENST00000592385 E9PCH4 1651 aa20.83■□□□□ 0.93
HDAC5-211ENST00000592385 POLR3GLQ9BT43 218 aa20.83■□□□□ 0.93
HDAC5-211ENST00000592385 KDM2AQ9Y2K7 1162 aa20.83■□□□□ 0.93
HDAC5-211ENST00000592385 PRAG1Q86YV5 1406 aa20.83■□□□□ 0.93
HDAC5-211ENST00000592385 DUOX2Q9NRD8 1548 aa20.83■□□□□ 0.92
HDAC5-211ENST00000592385 KTN1Q86UP2 1357 aaKnown RBP20.83■□□□□ 0.92
HDAC5-211ENST00000592385 ST20-MTHFSA0A0A6YYL1 179 aa20.82■□□□□ 0.92
HDAC5-211ENST00000592385 PLA2R1Q13018 1463 aa20.81■□□□□ 0.92
HDAC5-211ENST00000592385 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
HDAC5-211ENST00000592385 LAMC1P11047 1609 aa20.8■□□□□ 0.92
HDAC5-211ENST00000592385 UHRF1BP1LA0JNW5 1464 aa20.8■□□□□ 0.92
HDAC5-211ENST00000592385 PPP4R2Q9NY27 417 aa20.8■□□□□ 0.92
HDAC5-211ENST00000592385 IRX6P78412 446 aaPredicted RBP20.79■□□□□ 0.92
HDAC5-211ENST00000592385 RBM19Q9Y4C8 960 aaKnown RBP20.79■□□□□ 0.92
HDAC5-211ENST00000592385 ATP10AO60312 1499 aa20.79■□□□□ 0.92
HDAC5-211ENST00000592385 ERBINQ96RT1 1412 aa20.79■□□□□ 0.92
HDAC5-211ENST00000592385 PLCH2O75038 1416 aa20.79■□□□□ 0.92
HDAC5-211ENST00000592385 SMG6Q86US8 1419 aaKnown RBP20.79■□□□□ 0.92
HDAC5-211ENST00000592385 ZCCHC11Q5TAX3 1644 aaKnown RBP20.79■□□□□ 0.92
HDAC5-211ENST00000592385 GPRASP1Q5JY77 1395 aa20.78■□□□□ 0.92
HDAC5-211ENST00000592385 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.92
HDAC5-211ENST00000592385 A2MP01023 1474 aa20.76■□□□□ 0.91
HDAC5-211ENST00000592385 EIF2AK4Q9P2K8 1649 aaKnown RBP20.75■□□□□ 0.91
HDAC5-211ENST00000592385 PNISRQ8TF01 805 aaKnown RBP20.74■□□□□ 0.91
HDAC5-211ENST00000592385 ABCC1P33527 1531 aa20.74■□□□□ 0.91
HDAC5-211ENST00000592385 RALBP1Q15311 655 aa20.74■□□□□ 0.91
HDAC5-211ENST00000592385 BRD4O60885 1362 aaPredicted RBP20.73■□□□□ 0.91
HDAC5-211ENST00000592385 PRDM15P57071 1507 aaPredicted RBP20.72■□□□□ 0.91
HDAC5-211ENST00000592385 EFCAB2Q5VUJ9 269 aa20.72■□□□□ 0.91
HDAC5-211ENST00000592385 TMC1Q8TDI8 760 aa20.72■□□□□ 0.91
HDAC5-211ENST00000592385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.72■□□□□ 0.91
HDAC5-211ENST00000592385 MYBBP1AQ9BQG0 1328 aaKnown RBP20.71■□□□□ 0.91
HDAC5-211ENST00000592385 LRPPRCP42704 1394 aaKnown RBP20.7■□□□□ 0.9
HDAC5-211ENST00000592385 ARAP3Q8WWN8 1544 aa20.7■□□□□ 0.9
HDAC5-211ENST00000592385 NUDCQ9Y266 331 aa20.7■□□□□ 0.9
HDAC5-211ENST00000592385 RGL3Q3MIN7 710 aa20.68■□□□□ 0.9
HDAC5-211ENST00000592385 COL17A1Q9UMD9 1497 aaPredicted RBP20.67■□□□□ 0.9
HDAC5-211ENST00000592385 CNGB1Q14028 1251 aaPredicted RBP20.67■□□□□ 0.9
HDAC5-211ENST00000592385 ANP32EQ9BTT0 268 aa20.67■□□□□ 0.9
HDAC5-211ENST00000592385 RNF123Q5XPI4 1314 aa20.66■□□□□ 0.9
HDAC5-211ENST00000592385 NBPF1Q3BBV0 1214 aa20.66■□□□□ 0.9
HDAC5-211ENST00000592385 RTEL1-TNFRSF6BF6WH68 1400 aa20.65■□□□□ 0.9
HDAC5-211ENST00000592385 RNF17Q9BXT8 1623 aaKnown RBP20.65■□□□□ 0.9
HDAC5-211ENST00000592385 TRAPPC8Q9Y2L5 1435 aa20.65■□□□□ 0.9
HDAC5-211ENST00000592385 PARD3Q8TEW0 1356 aa20.65■□□□□ 0.9
HDAC5-211ENST00000592385 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
HDAC5-211ENST00000592385 NLRP13Q86W25 1043 aa20.61■□□□□ 0.89
HDAC5-211ENST00000592385 TESK2Q96S53 571 aa20.61■□□□□ 0.89
HDAC5-211ENST00000592385 ZFYVE16Q7Z3T8 1539 aa20.61■□□□□ 0.89
HDAC5-211ENST00000592385 PER1O15534 1290 aaPredicted RBP20.6■□□□□ 0.89
HDAC5-211ENST00000592385 DEPDC5O75140 1603 aa20.59■□□□□ 0.89
HDAC5-211ENST00000592385 TRPM2O94759 1503 aa20.58■□□□□ 0.89
HDAC5-211ENST00000592385 SPAG9O60271 1321 aaKnown RBP20.58■□□□□ 0.89
HDAC5-211ENST00000592385 FANCIQ9NVI1 1328 aa20.58■□□□□ 0.88
HDAC5-211ENST00000592385 B4GALNT3Q6L9W6 998 aa20.57■□□□□ 0.88
HDAC5-211ENST00000592385 DISP3Q9P2K9 1392 aa20.57■□□□□ 0.88
HDAC5-211ENST00000592385 CEP152O94986 1710 aa20.57■□□□□ 0.88
HDAC5-211ENST00000592385 SPHKAPQ2M3C7 1700 aa20.56■□□□□ 0.88
HDAC5-211ENST00000592385 MADDQ8WXG6 1647 aa20.56■□□□□ 0.88
HDAC5-211ENST00000592385 TMF1P82094 1093 aa20.55■□□□□ 0.88
HDAC5-211ENST00000592385 STAC3Q96MF2 364 aa20.55■□□□□ 0.88
HDAC5-211ENST00000592385 PTPRTO14522 1441 aa20.55■□□□□ 0.88
HDAC5-211ENST00000592385 INSRP06213 1382 aa20.55■□□□□ 0.88
HDAC5-211ENST00000592385 ZMYM4Q5VZL5 1548 aa20.54■□□□□ 0.88
HDAC5-211ENST00000592385 TET3O43151 1660 aa20.54■□□□□ 0.88
HDAC5-211ENST00000592385 ABCA9Q8IUA7 1624 aa20.54■□□□□ 0.88
HDAC5-211ENST00000592385 WDR7Q9Y4E6 1490 aa20.54■□□□□ 0.88
HDAC5-211ENST00000592385 IQGAP1P46940 1657 aa20.53■□□□□ 0.88
HDAC5-211ENST00000592385 INO80Q9ULG1 1556 aaPredicted RBP20.53■□□□□ 0.88
HDAC5-211ENST00000592385 VWDEQ8N2E2 1590 aa20.51■□□□□ 0.87
HDAC5-211ENST00000592385 ATP7AQ04656 1500 aa20.5■□□□□ 0.87
HDAC5-211ENST00000592385 AFAP1Q8N556 730 aa20.5■□□□□ 0.87
HDAC5-211ENST00000592385 NEURL4Q96JN8 1562 aa20.49■□□□□ 0.87
HDAC5-211ENST00000592385 PDE3BQ13370 1112 aa20.49■□□□□ 0.87
HDAC5-211ENST00000592385 CLTCL1P53675 1640 aa20.49■□□□□ 0.87
HDAC5-211ENST00000592385 SCAPERQ9BY12 1400 aa20.49■□□□□ 0.87
HDAC5-211ENST00000592385 FANCAO15360 1455 aa20.48■□□□□ 0.87
HDAC5-211ENST00000592385 PANK3Q9H999 370 aa20.48■□□□□ 0.87
HDAC5-211ENST00000592385 KANK1Q14678 1352 aa20.47■□□□□ 0.87
HDAC5-211ENST00000592385 KIAA1210Q9ULL0 1709 aa20.46■□□□□ 0.87
HDAC5-211ENST00000592385 BLMP54132 1417 aaPredicted RBP20.45■□□□□ 0.86
HDAC5-211ENST00000592385 SCAF11Q99590 1463 aaKnown RBP20.45■□□□□ 0.86
HDAC5-211ENST00000592385 CCDC136Q96JN2 1154 aa20.43■□□□□ 0.86
HDAC5-211ENST00000592385 CC2D1BQ5T0F9 858 aaKnown RBP20.43■□□□□ 0.86
HDAC5-211ENST00000592385 MSH5O43196 834 aa20.42■□□□□ 0.86
HDAC5-211ENST00000592385 SYNMO15061 1565 aa20.42■□□□□ 0.86
HDAC5-211ENST00000592385 CDCA8Q53HL2 280 aa20.42■□□□□ 0.86
HDAC5-211ENST00000592385 ADGRL1O94910 1474 aa20.42■□□□□ 0.86
HDAC5-211ENST00000592385 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
HDAC5-211ENST00000592385 MROH1Q8NDA8 1641 aa20.4■□□□□ 0.86
HDAC5-211ENST00000592385 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
HDAC5-211ENST00000592385 RCAN3Q9UKA8 241 aa20.39■□□□□ 0.85
HDAC5-211ENST00000592385 EIF3AQ14152 1382 aaKnown RBP20.38■□□□□ 0.85
HDAC5-211ENST00000592385 MYOM2P54296 1465 aa20.36■□□□□ 0.85
HDAC5-211ENST00000592385 KIF3BO15066 747 aa20.36■□□□□ 0.85
HDAC5-211ENST00000592385 KIF1BO60333 1816 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms