RNA–Protein interactions for RNA: ENST00000592385.5

HDAC5-211, Transcript of histone deacetylase 5, humanhuman

TSL 5

Gene HDAC5, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-211ENST00000592385 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
HDAC5-211ENST00000592385 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
HDAC5-211ENST00000592385 ZCCHC6Q5VYS8 1495 aaKnown RBP27.21■■□□□ 1.95
HDAC5-211ENST00000592385 SHROOM4Q9ULL8 1493 aa27.01■■□□□ 1.91
HDAC5-211ENST00000592385 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
HDAC5-211ENST00000592385 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
HDAC5-211ENST00000592385 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
HDAC5-211ENST00000592385 MYO15BQ96JP2 1530 aa25.85■■□□□ 1.73
HDAC5-211ENST00000592385 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
HDAC5-211ENST00000592385 ABCC9O60706 1549 aa25.66■■□□□ 1.7
HDAC5-211ENST00000592385 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
HDAC5-211ENST00000592385 NACADO15069 1562 aa25.43■■□□□ 1.66
HDAC5-211ENST00000592385 RSF1Q96T23 1441 aaPredicted RBP25.35■■□□□ 1.65
HDAC5-211ENST00000592385 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
HDAC5-211ENST00000592385 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
HDAC5-211ENST00000592385 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
HDAC5-211ENST00000592385 LOC105371045A0A1W2PR82 267 aa24.91■■□□□ 1.58
HDAC5-211ENST00000592385 HRCP23327 699 aa24.86■■□□□ 1.57
HDAC5-211ENST00000592385 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
HDAC5-211ENST00000592385 WIZO95785 1651 aa24.78■■□□□ 1.56
HDAC5-211ENST00000592385 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
HDAC5-211ENST00000592385 BAZ1AQ9NRL2 1556 aaPredicted RBP24.74■■□□□ 1.55
HDAC5-211ENST00000592385 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
HDAC5-211ENST00000592385 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
HDAC5-211ENST00000592385 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
HDAC5-211ENST00000592385 TRIM26Q12899 539 aaPredicted RBP24.52■■□□□ 1.52
HDAC5-211ENST00000592385 TOP2AP11388 1531 aaKnown RBP24.49■■□□□ 1.51
HDAC5-211ENST00000592385 FAM9AQ8IZU1 332 aaPredicted RBP24.4■■□□□ 1.5
HDAC5-211ENST00000592385 SMARCA2P51531 1590 aa24.32■■□□□ 1.48
HDAC5-211ENST00000592385 CCDC88BA6NC98 1476 aa24.29■■□□□ 1.48
HDAC5-211ENST00000592385 BICRAQ9NZM4 1560 aa24.27■■□□□ 1.48
HDAC5-211ENST00000592385 PPARGC1BQ86YN6 1023 aaKnown RBP24.16■■□□□ 1.46
HDAC5-211ENST00000592385 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
HDAC5-211ENST00000592385 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
HDAC5-211ENST00000592385 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.447e-8■□□□□ 9.1
HDAC5-211ENST00000592385 EHMT2Q96KQ7 1210 aa24.05■■□□□ 1.44
HDAC5-211ENST00000592385 ZEB1P37275 1124 aaPredicted RBP24.03■■□□□ 1.44
HDAC5-211ENST00000592385 EEA1Q15075 1411 aa23.96■■□□□ 1.43
HDAC5-211ENST00000592385 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
HDAC5-211ENST00000592385 SOGA1O94964 1423 aa23.87■■□□□ 1.41
HDAC5-211ENST00000592385 WRNQ14191 1432 aaPredicted RBP eCLIP23.84■■□□□ 1.41
HDAC5-211ENST00000592385 TNIKQ9UKE5 1360 aa23.82■■□□□ 1.4
HDAC5-211ENST00000592385 BAZ1BQ9UIG0 1483 aaKnown RBP23.8■■□□□ 1.4
HDAC5-211ENST00000592385 CEP162Q5TB80 1403 aa23.78■■□□□ 1.4
HDAC5-211ENST00000592385 CSRNP3Q8WYN3 585 aa23.78■■□□□ 1.4
HDAC5-211ENST00000592385 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
HDAC5-211ENST00000592385 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
HDAC5-211ENST00000592385 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
HDAC5-211ENST00000592385 KIF21BO75037 1637 aa23.62■■□□□ 1.37
HDAC5-211ENST00000592385 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
HDAC5-211ENST00000592385 UBTFP17480 764 aaKnown RBP23.58■■□□□ 1.37
HDAC5-211ENST00000592385 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
HDAC5-211ENST00000592385 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
HDAC5-211ENST00000592385 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
HDAC5-211ENST00000592385 BIVM-ERCC5R4GMW8 1640 aa23.46■■□□□ 1.35
HDAC5-211ENST00000592385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.4■■□□□ 1.34
HDAC5-211ENST00000592385 CCER1Q8TC90 406 aaPredicted RBP23.4■■□□□ 1.34
HDAC5-211ENST00000592385 CLIP1P30622 1438 aa23.37■■□□□ 1.33
HDAC5-211ENST00000592385 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
HDAC5-211ENST00000592385 VPS8Q8N3P4 1428 aa23.3■■□□□ 1.32
HDAC5-211ENST00000592385 TTBK1Q5TCY1 1321 aaPredicted RBP23.29■■□□□ 1.32
HDAC5-211ENST00000592385 ERICH3Q5RHP9 1530 aa23.27■■□□□ 1.32
HDAC5-211ENST00000592385 CFTRP13569 1480 aa23.25■■□□□ 1.31
HDAC5-211ENST00000592385 CUX1P39880 1505 aa23.23■■□□□ 1.31
HDAC5-211ENST00000592385 PRXQ9BXM0 1461 aa23.22■■□□□ 1.31
HDAC5-211ENST00000592385 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
HDAC5-211ENST00000592385 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
HDAC5-211ENST00000592385 APLP2Q06481 763 aa23.1■■□□□ 1.29
HDAC5-211ENST00000592385 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
HDAC5-211ENST00000592385 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
HDAC5-211ENST00000592385 RANGAP1P46060 587 aaPredicted RBP22.95■■□□□ 1.26
HDAC5-211ENST00000592385 HNRNPUL2Q1KMD3 747 aaKnown RBP22.94■■□□□ 1.26
HDAC5-211ENST00000592385 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
HDAC5-211ENST00000592385 CC2D2AQ9P2K1 1620 aa22.87■■□□□ 1.25
HDAC5-211ENST00000592385 CUX2O14529 1486 aa22.86■■□□□ 1.25
HDAC5-211ENST00000592385 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
HDAC5-211ENST00000592385 IGF1RP08069 1367 aa22.83■■□□□ 1.25
HDAC5-211ENST00000592385 FGD5Q6ZNL6 1462 aa22.81■■□□□ 1.24
HDAC5-211ENST00000592385 ZNF316A6NFI3 1004 aaPredicted RBP22.81■■□□□ 1.24
HDAC5-211ENST00000592385 RRBP1Q9P2E9 1410 aaKnown RBP22.77■■□□□ 1.24
HDAC5-211ENST00000592385 KANK4Q5T7N3 995 aaPredicted RBP22.76■■□□□ 1.23
HDAC5-211ENST00000592385 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
HDAC5-211ENST00000592385 CLSPNQ9HAW4 1339 aa22.74■■□□□ 1.23
HDAC5-211ENST00000592385 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
HDAC5-211ENST00000592385 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
HDAC5-211ENST00000592385 MAP3K1Q13233 1512 aa22.7■■□□□ 1.22
HDAC5-211ENST00000592385 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
HDAC5-211ENST00000592385 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
HDAC5-211ENST00000592385 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
HDAC5-211ENST00000592385 TIAM1Q13009 1591 aa22.62■■□□□ 1.21
HDAC5-211ENST00000592385 CCNB3Q8WWL7 1395 aa22.62■■□□□ 1.21
HDAC5-211ENST00000592385 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
HDAC5-211ENST00000592385 CENPBP07199 599 aaPredicted RBP22.6■■□□□ 1.21
HDAC5-211ENST00000592385 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
HDAC5-211ENST00000592385 FHAD1B1AJZ9 1412 aa22.56■■□□□ 1.2
HDAC5-211ENST00000592385 POLA1P09884 1462 aaPredicted RBP22.56■■□□□ 1.2
HDAC5-211ENST00000592385 NEUROD1Q13562 356 aa22.56■■□□□ 1.2
HDAC5-211ENST00000592385 CUL7Q14999 1698 aa22.54■■□□□ 1.2
HDAC5-211ENST00000592385 LAMC3Q9Y6N6 1575 aa22.53■■□□□ 1.2
HDAC5-211ENST00000592385 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms