RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 MYOM3Q5VTT5 1437 aa28.91■■■□□ 2.22
CIRBP-237ENST00000592234 MIA2Q96PC5 1412 aa28.9■■■□□ 2.22
CIRBP-237ENST00000592234 MAST1Q9Y2H9 1570 aa28.9■■■□□ 2.22
CIRBP-237ENST00000592234 NCKAP5LQ9HCH0 1330 aa28.89■■■□□ 2.21
CIRBP-237ENST00000592234 PLA2R1Q13018 1463 aa28.88■■■□□ 2.21
CIRBP-237ENST00000592234 WASHC2CQ9Y4E1 1318 aa28.88■■■□□ 2.21
CIRBP-237ENST00000592234 APLP2Q06481 763 aa28.86■■■□□ 2.21
CIRBP-237ENST00000592234 LTBP4Q8N2S1 1624 aa28.85■■■□□ 2.21
CIRBP-237ENST00000592234 A2ML1A8K2U0 1454 aa28.85■■■□□ 2.21
CIRBP-237ENST00000592234 PZPP20742 1482 aa28.85■■■□□ 2.21
CIRBP-237ENST00000592234 PKD2Q13563 968 aa28.84■■■□□ 2.21
CIRBP-237ENST00000592234 DNMT1P26358 1616 aaKnown RBP28.83■■■□□ 2.21
CIRBP-237ENST00000592234 FBXO31Q5XUX0 539 aaPredicted RBP28.83■■■□□ 2.21
CIRBP-237ENST00000592234 TNRQ92752 1358 aa28.82■■■□□ 2.2
CIRBP-237ENST00000592234 TCOF1Q13428 1488 aaKnown RBP28.82■■■□□ 2.2
CIRBP-237ENST00000592234 RNF17Q9BXT8 1623 aaKnown RBP28.81■■■□□ 2.2
CIRBP-237ENST00000592234 EIF2AK4Q9P2K8 1649 aaKnown RBP28.8■■■□□ 2.2
CIRBP-237ENST00000592234 ZC3H13Q5T200 1668 aaKnown RBP28.77■■■□□ 2.2
CIRBP-237ENST00000592234 PTPN23Q9H3S7 1636 aa28.76■■■□□ 2.2
CIRBP-237ENST00000592234 POLR1AO95602 1720 aaPredicted RBP28.75■■■□□ 2.19
CIRBP-237ENST00000592234 CROCC2H7BZ55 1655 aa28.75■■■□□ 2.19
CIRBP-237ENST00000592234 IQSEC2Q5JU85 1478 aa28.75■■■□□ 2.19
CIRBP-237ENST00000592234 ABCC3O15438 1527 aa28.73■■■□□ 2.19
CIRBP-237ENST00000592234 DUOX2Q9NRD8 1548 aa28.73■■■□□ 2.19
CIRBP-237ENST00000592234 ZNF335Q9H4Z2 1342 aaPredicted RBP28.72■■■□□ 2.19
CIRBP-237ENST00000592234 CEP152O94986 1710 aa28.7■■■□□ 2.19
CIRBP-237ENST00000592234 NLRP1Q9C000 1473 aa28.7■■■□□ 2.18
CIRBP-237ENST00000592234 MROH1Q8NDA8 1641 aa28.69■■■□□ 2.18
CIRBP-237ENST00000592234 CFAP65Q6ZU64 1925 aaKnown RBP28.69■■■□□ 2.18
CIRBP-237ENST00000592234 SHANK2Q9UPX8 1470 aa28.69■■■□□ 2.18
CIRBP-237ENST00000592234 ABCC5O15440 1437 aa28.68■■■□□ 2.18
CIRBP-237ENST00000592234 UGGT1Q9NYU2 1555 aa28.67■■■□□ 2.18
CIRBP-237ENST00000592234 KIF15Q9NS87 1388 aa28.66■■■□□ 2.18
CIRBP-237ENST00000592234 FGD6Q6ZV73 1430 aa28.66■■■□□ 2.18
CIRBP-237ENST00000592234 NEURL4Q96JN8 1562 aa28.65■■■□□ 2.18
CIRBP-237ENST00000592234 SPATA31D1Q6ZQQ2 1576 aa28.64■■■□□ 2.18
CIRBP-237ENST00000592234 DAPK1P53355 1430 aa28.64■■■□□ 2.18
CIRBP-237ENST00000592234 THEMISQ8N1K5 641 aaPredicted RBP28.64■■■□□ 2.18
CIRBP-237ENST00000592234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.63■■■□□ 2.17
CIRBP-237ENST00000592234 RRP7BPQ9NSQ0 103 aa28.62■■■□□ 2.17
CIRBP-237ENST00000592234 ERBINQ96RT1 1412 aa28.61■■■□□ 2.17
CIRBP-237ENST00000592234 ANKLE2Q86XL3 938 aa28.61■■■□□ 2.17
CIRBP-237ENST00000592234 ERVK-7P63135 1459 aa28.6■■■□□ 2.17
CIRBP-237ENST00000592234 PRDM15P57071 1507 aaPredicted RBP28.59■■■□□ 2.17
CIRBP-237ENST00000592234 DEPDC5O75140 1603 aa28.56■■■□□ 2.16
CIRBP-237ENST00000592234 CHIC2Q9UKJ5 165 aa28.54■■■□□ 2.16
CIRBP-237ENST00000592234 ANKRD30AQ9BXX3 1397 aa28.53■■■□□ 2.16
CIRBP-237ENST00000592234 UBAP1LF5GYI3 381 aa28.53■■■□□ 2.16
CIRBP-237ENST00000592234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.52■■■□□ 2.161e-19■□□□□ 10
CIRBP-237ENST00000592234 MED14O60244 1454 aa28.52■■■□□ 2.16
CIRBP-237ENST00000592234 NPHP4O75161 1426 aaPredicted RBP28.52■■■□□ 2.16
CIRBP-237ENST00000592234 UBR1Q8IWV7 1749 aa28.51■■■□□ 2.15
CIRBP-237ENST00000592234 IQGAP1P46940 1657 aa28.51■■■□□ 2.15
CIRBP-237ENST00000592234 CPS1P31327 1500 aa28.5■■■□□ 2.15
CIRBP-237ENST00000592234 ARHGAP31Q2M1Z3 1444 aa28.5■■■□□ 2.15
CIRBP-237ENST00000592234 KANK1Q14678 1352 aa28.5■■■□□ 2.15
CIRBP-237ENST00000592234 VWDEQ8N2E2 1590 aa28.46■■■□□ 2.15
CIRBP-237ENST00000592234 FAM50AQ14320 339 aaKnown RBP28.45■■■□□ 2.14
CIRBP-237ENST00000592234 DISP3Q9P2K9 1392 aa28.43■■■□□ 2.14
CIRBP-237ENST00000592234 ADGRL2O95490 1459 aa28.42■■■□□ 2.14
CIRBP-237ENST00000592234 LMTK2Q8IWU2 1503 aa28.4■■■□□ 2.14
CIRBP-237ENST00000592234 PIK3C2BO00750 1634 aa28.39■■■□□ 2.13
CIRBP-237ENST00000592234 SCAF11Q99590 1463 aaKnown RBP28.37■■■□□ 2.13
CIRBP-237ENST00000592234 SLIT1O75093 1534 aa28.36■■■□□ 2.13
CIRBP-237ENST00000592234 STRCP1A6NGW2 1772 aa28.36■■■□□ 2.13
CIRBP-237ENST00000592234 ARHGAP23Q9P227 1491 aa28.35■■■□□ 2.13
CIRBP-237ENST00000592234 TOM1O60784 492 aa28.35■■■□□ 2.13
CIRBP-237ENST00000592234 SCAF1Q9H7N4 1312 aaKnown RBP28.34■■■□□ 2.13
CIRBP-237ENST00000592234 TXNDC2Q86VQ3 553 aa28.33■■■□□ 2.13
CIRBP-237ENST00000592234 STAG3Q9UJ98 1225 aa28.33■■■□□ 2.13
CIRBP-237ENST00000592234 EFCAB6Q5THR3 1501 aa28.33■■■□□ 2.13
CIRBP-237ENST00000592234 ANKRD50Q9ULJ7 1429 aa28.32■■■□□ 2.12
CIRBP-237ENST00000592234 KDM5AP29375 1690 aaKnown RBP28.32■■■□□ 2.12
CIRBP-237ENST00000592234 LTKP29376 864 aa28.31■■■□□ 2.12
CIRBP-237ENST00000592234 PIP4K2BP78356 416 aa28.31■■■□□ 2.12
CIRBP-237ENST00000592234 EID1Q9Y6B2 187 aa28.31■■■□□ 2.12
CIRBP-237ENST00000592234 SYNMO15061 1565 aa28.29■■■□□ 2.12
CIRBP-237ENST00000592234 IDI1Q13907 227 aa28.27■■■□□ 2.12
CIRBP-237ENST00000592234 TMEM2Q9UHN6 1383 aa28.26■■■□□ 2.12
CIRBP-237ENST00000592234 LRRC7Q96NW7 1537 aa28.26■■■□□ 2.11
CIRBP-237ENST00000592234 NOS1P29475 1434 aa28.26■■■□□ 2.11
CIRBP-237ENST00000592234 ILDR2Q71H61 639 aa28.23■■■□□ 2.11
CIRBP-237ENST00000592234 TET3O43151 1660 aa28.23■■■□□ 2.11
CIRBP-237ENST00000592234 RPRD2Q5VT52 1461 aaKnown RBP28.21■■■□□ 2.11
CIRBP-237ENST00000592234 HSPA1LP34931 641 aa28.21■■■□□ 2.11
CIRBP-237ENST00000592234 ADGRB3O60242 1522 aa28.2■■■□□ 2.1
CIRBP-237ENST00000592234 ALKQ9UM73 1620 aa28.2■■■□□ 2.1
CIRBP-237ENST00000592234 GCC2Q8IWJ2 1684 aa28.19■■■□□ 2.1
CIRBP-237ENST00000592234 SLC52A1Q9NWF4 448 aa28.19■■■□□ 2.1
CIRBP-237ENST00000592234 UNC13BO14795 1591 aa28.19■■■□□ 2.1
CIRBP-237ENST00000592234 ROCK1Q13464 1354 aa28.16■■■□□ 2.1
CIRBP-237ENST00000592234 MYO5BQ9ULV0 1848 aa28.15■■■□□ 2.1
CIRBP-237ENST00000592234 XIRP1Q702N8 1843 aaKnown RBP28.15■■■□□ 2.1
CIRBP-237ENST00000592234 PPARGC1BQ86YN6 1023 aaKnown RBP28.14■■■□□ 2.1
CIRBP-237ENST00000592234 ITGAEP38570 1179 aa28.11■■■□□ 2.09
CIRBP-237ENST00000592234 E9PCH4 1651 aa28.1■■■□□ 2.09
CIRBP-237ENST00000592234 IQGAP3Q86VI3 1631 aa28.09■■■□□ 2.09
CIRBP-237ENST00000592234 SLC26A8Q96RN1 970 aa28.08■■■□□ 2.09
CIRBP-237ENST00000592234 BCANQ96GW7 911 aa28.06■■■□□ 2.08
CIRBP-237ENST00000592234 TMEM131LA2VDJ0 1609 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms