RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 NISCHQ9Y2I1 1504 aa45.73■■■■■ 4.91
CIRBP-237ENST00000592234 CCDC180Q9P1Z9 1646 aa41.04■■■■■ 4.16
CIRBP-237ENST00000592234 ABCC9O60706 1549 aa40.85■■■■■ 4.13
CIRBP-237ENST00000592234 RB1CC1Q8TDY2 1594 aa38.98■■■■□ 3.83
CIRBP-237ENST00000592234 NACADO15069 1562 aa38.73■■■■□ 3.79
CIRBP-237ENST00000592234 DCAF8L2P0C7V8 631 aa38.58■■■■□ 3.77
CIRBP-237ENST00000592234 MYO15BQ96JP2 1530 aa38.22■■■■□ 3.71
CIRBP-237ENST00000592234 UNC13AQ9UPW8 1703 aa38.16■■■■□ 3.7
CIRBP-237ENST00000592234 DNAJC5BQ9UF47 199 aa38.14■■■■□ 3.7
CIRBP-237ENST00000592234 PABPN1Q86U42 306 aaKnown RBP eCLIP38.04■■■■□ 3.681e-14■■□□□ 14.3
CIRBP-237ENST00000592234 ZCCHC6Q5VYS8 1495 aaKnown RBP37.94■■■■□ 3.66
CIRBP-237ENST00000592234 BICRAQ9NZM4 1560 aa37.8■■■■□ 3.64
CIRBP-237ENST00000592234 DCAF1Q9Y4B6 1507 aa37.78■■■■□ 3.64
CIRBP-237ENST00000592234 SCRIBQ14160 1630 aa37.39■■■■□ 3.58
CIRBP-237ENST00000592234 SHROOM4Q9ULL8 1493 aa37.31■■■■□ 3.56
CIRBP-237ENST00000592234 CC2D2AQ9P2K1 1620 aa36.93■■■■□ 3.5
CIRBP-237ENST00000592234 EIF4G1Q04637 1599 aaKnown RBP36.88■■■■□ 3.49
CIRBP-237ENST00000592234 CECR2Q9BXF3 1484 aa36.78■■■■□ 3.48
CIRBP-237ENST00000592234 NCAPD3P42695 1498 aa35.72■■■■□ 3.31
CIRBP-237ENST00000592234 SMARCA4P51532 1647 aa35.68■■■■□ 3.3
CIRBP-237ENST00000592234 ATAD2BQ9ULI0 1458 aa35.64■■■■□ 3.3
CIRBP-237ENST00000592234 SMARCA2P51531 1590 aa35.58■■■■□ 3.29
CIRBP-237ENST00000592234 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.28
CIRBP-237ENST00000592234 HMGXB3Q12766 1538 aa35.5■■■■□ 3.27
CIRBP-237ENST00000592234 BAZ1BQ9UIG0 1483 aaKnown RBP35.33■■■■□ 3.25
CIRBP-237ENST00000592234 PEG3Q9GZU2 1588 aa35.31■■■■□ 3.24
CIRBP-237ENST00000592234 ERCC6Q03468 1493 aa35.29■■■■□ 3.24
CIRBP-237ENST00000592234 MROH2BQ7Z745 1585 aa35.24■■■■□ 3.23
CIRBP-237ENST00000592234 CUX2O14529 1486 aa35.16■■■■□ 3.22
CIRBP-237ENST00000592234 NESP48681 1621 aa35.14■■■■□ 3.22
CIRBP-237ENST00000592234 LAMC3Q9Y6N6 1575 aa34.94■■■■□ 3.18
CIRBP-237ENST00000592234 DNAJC5Q9H3Z4 198 aa34.93■■■■□ 3.18
CIRBP-237ENST00000592234 WIZO95785 1651 aa34.87■■■■□ 3.17
CIRBP-237ENST00000592234 THOC2Q8NI27 1593 aaKnown RBP34.77■■■■□ 3.16
CIRBP-237ENST00000592234 KIF21AQ7Z4S6 1674 aa34.75■■■■□ 3.15
CIRBP-237ENST00000592234 PDS5BQ9NTI5 1447 aa34.71■■■■□ 3.15
CIRBP-237ENST00000592234 CADPSQ9ULU8 1353 aa34.64■■■■□ 3.14
CIRBP-237ENST00000592234 RSF1Q96T23 1441 aaPredicted RBP34.55■■■■□ 3.12
CIRBP-237ENST00000592234 TOP2AP11388 1531 aaKnown RBP34.42■■■■□ 3.1
CIRBP-237ENST00000592234 MRC2Q9UBG0 1479 aa34.4■■■■□ 3.1
CIRBP-237ENST00000592234 WDR62O43379 1518 aa34.31■■■■□ 3.08
CIRBP-237ENST00000592234 CEP164Q9UPV0 1460 aa34.31■■■■□ 3.08
CIRBP-237ENST00000592234 CFTRP13569 1480 aa34.28■■■■□ 3.08
CIRBP-237ENST00000592234 FANCD2Q9BXW9 1451 aa34.27■■■■□ 3.08
CIRBP-237ENST00000592234 PRDM2Q13029 1718 aa34.07■■■■□ 3.05
CIRBP-237ENST00000592234 CCDC88BA6NC98 1476 aa34.01■■■■□ 3.03
CIRBP-237ENST00000592234 URB2Q14146 1524 aaKnown RBP33.97■■■■□ 3.03
CIRBP-237ENST00000592234 TOPBP1Q92547 1522 aa33.64■■■□□ 2.98
CIRBP-237ENST00000592234 IFT140Q96RY7 1462 aa33.61■■■□□ 2.97
CIRBP-237ENST00000592234 ABCC8Q09428 1581 aa33.6■■■□□ 2.97
CIRBP-237ENST00000592234 OSCARQ8IYS5 282 aa33.57■■■□□ 2.96
CIRBP-237ENST00000592234 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
CIRBP-237ENST00000592234 ZNF608Q9ULD9 1512 aaPredicted RBP33.53■■■□□ 2.96
CIRBP-237ENST00000592234 TRIM41Q8WV44 630 aa33.51■■■□□ 2.95
CIRBP-237ENST00000592234 EIF4G3O43432 1585 aaKnown RBP33.39■■■□□ 2.94
CIRBP-237ENST00000592234 TARBP1Q13395 1621 aaKnown RBP33.34■■■□□ 2.93
CIRBP-237ENST00000592234 POLA1P09884 1462 aaPredicted RBP33.3■■■□□ 2.92
CIRBP-237ENST00000592234 AQRO60306 1485 aaKnown RBP eCLIP33.25■■■□□ 2.913e-13■■■■■ 34.2
CIRBP-237ENST00000592234 RAD54L2Q9Y4B4 1467 aa33.18■■■□□ 2.9
CIRBP-237ENST00000592234 SUPT5HO00267 1087 aaKnown RBP33.17■■■□□ 2.9
CIRBP-237ENST00000592234 CHD1O14646 1710 aa33.16■■■□□ 2.9
CIRBP-237ENST00000592234 RIMBP3CA6NJZ7 1639 aa33.15■■■□□ 2.9
CIRBP-237ENST00000592234 RIMBP3BA6NNM3 1639 aa33.15■■■□□ 2.9
CIRBP-237ENST00000592234 SOGA1O94964 1423 aa33.15■■■□□ 2.9
CIRBP-237ENST00000592234 RIMBP3Q9UFD9 1639 aa33.15■■■□□ 2.9
CIRBP-237ENST00000592234 FGD5Q6ZNL6 1462 aa33.12■■■□□ 2.89
CIRBP-237ENST00000592234 CUX1P39880 1505 aa33.11■■■□□ 2.89
CIRBP-237ENST00000592234 TDRD9Q8NDG6 1382 aaKnown RBP33.06■■■□□ 2.88
CIRBP-237ENST00000592234 ARHGEF11O15085 1522 aa33.03■■■□□ 2.88
CIRBP-237ENST00000592234 WDR97A6NE52 1622 aa33.03■■■□□ 2.88
CIRBP-237ENST00000592234 FBLN2P98095 1184 aa33.02■■■□□ 2.88
CIRBP-237ENST00000592234 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
CIRBP-237ENST00000592234 GRIN2BQ13224 1484 aa32.85■■■□□ 2.85
CIRBP-237ENST00000592234 MAGI1Q96QZ7 1491 aaPredicted RBP32.85■■■□□ 2.85
CIRBP-237ENST00000592234 PBRM1Q86U86 1689 aa32.81■■■□□ 2.84
CIRBP-237ENST00000592234 CHMP7Q8WUX9 453 aaPredicted RBP32.8■■■□□ 2.84
CIRBP-237ENST00000592234 CYB5RLQ6IPT4 315 aa32.77■■■□□ 2.84
CIRBP-237ENST00000592234 GAPVD1Q14C86 1478 aa32.76■■■□□ 2.84
CIRBP-237ENST00000592234 ABCA10Q8WWZ4 1543 aa32.75■■■□□ 2.83
CIRBP-237ENST00000592234 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
CIRBP-237ENST00000592234 SYNJ2O15056 1496 aa32.73■■■□□ 2.83
CIRBP-237ENST00000592234 ABCA5Q8WWZ7 1642 aa32.71■■■□□ 2.83
CIRBP-237ENST00000592234 ARAP1Q96P48 1450 aa32.71■■■□□ 2.83
CIRBP-237ENST00000592234 CLASP1Q7Z460 1538 aa32.71■■■□□ 2.83
CIRBP-237ENST00000592234 BIVM-ERCC5R4GMW8 1640 aa32.66■■■□□ 2.82
CIRBP-237ENST00000592234 TOP2BQ02880 1626 aa32.64■■■□□ 2.82
CIRBP-237ENST00000592234 WRNQ14191 1432 aaPredicted RBP eCLIP32.64■■■□□ 2.82
CIRBP-237ENST00000592234 ADAMTS12P58397 1594 aa32.45■■■□□ 2.79
CIRBP-237ENST00000592234 GRIN2AQ12879 1464 aa32.43■■■□□ 2.78
CIRBP-237ENST00000592234 TRHP20396 242 aaPredicted RBP32.39■■■□□ 2.78
CIRBP-237ENST00000592234 ERICH3Q5RHP9 1530 aa32.36■■■□□ 2.77
CIRBP-237ENST00000592234 FHAD1B1AJZ9 1412 aa32.34■■■□□ 2.77
CIRBP-237ENST00000592234 CEP170Q5SW79 1584 aa32.32■■■□□ 2.76
CIRBP-237ENST00000592234 NUP160Q12769 1436 aa32.3■■■□□ 2.76
CIRBP-237ENST00000592234 ERCC6L2Q5T890 1561 aa32.21■■■□□ 2.75
CIRBP-237ENST00000592234 SHROOM2Q13796 1616 aa32.18■■■□□ 2.74
CIRBP-237ENST00000592234 KIF27Q86VH2 1401 aa32■■■□□ 2.71
CIRBP-237ENST00000592234 PRG4Q92954 1404 aaPredicted RBP32■■■□□ 2.71
CIRBP-237ENST00000592234 RUSC2Q8N2Y8 1516 aa31.99■■■□□ 2.71
CIRBP-237ENST00000592234 JPH4Q96JJ6 628 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms