RNA–Protein interactions for RNA: ENST00000591357.5

JRK-208, Transcript of Jrk helix-turn-helix protein, human

TSL 4

Gene JRK, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
JRK-208	ENST00000591357	RRP7BP	Q9NSQ0	103 aa		32.92	■■■□□ 2.86
JRK-208	ENST00000591357	SHANK2	Q9UPX8	1470 aa		32.88	■■■□□ 2.85
JRK-208	ENST00000591357	CHIC2	Q9UKJ5	165 aa		32.88	■■■□□ 2.85
JRK-208	ENST00000591357	DNMT1	P26358	1616 aa	Known RBP	32.87	■■■□□ 2.85
JRK-208	ENST00000591357	KDM5D	Q9BY66	1539 aa		32.87	■■■□□ 2.85
JRK-208	ENST00000591357	KIF15	Q9NS87	1388 aa		32.86	■■■□□ 2.85
JRK-208	ENST00000591357	DMRT2	Q9Y5R5	561 aa		32.86	■■■□□ 2.85
JRK-208	ENST00000591357	DUOX2	Q9NRD8	1548 aa		32.86	■■■□□ 2.85
JRK-208	ENST00000591357	FAM135A	Q9P2D6	1515 aa		32.84	■■■□□ 2.85
JRK-208	ENST00000591357	CROCC2	H7BZ55	1655 aa		32.84	■■■□□ 2.85
JRK-208	ENST00000591357	FAM50A	Q14320	339 aa	Known RBP	32.83	■■■□□ 2.85
JRK-208	ENST00000591357	RNF17	Q9BXT8	1623 aa	Known RBP	32.83	■■■□□ 2.85
JRK-208	ENST00000591357	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.81	■■■□□ 2.84
JRK-208	ENST00000591357	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.81	■■■□□ 2.84
JRK-208	ENST00000591357	PZP	P20742	1482 aa		32.8	■■■□□ 2.84
JRK-208	ENST00000591357	NCOA1	Q15788	1441 aa		32.8	■■■□□ 2.84
JRK-208	ENST00000591357	MROH1	Q8NDA8	1641 aa		32.78	■■■□□ 2.84
JRK-208	ENST00000591357	CAMSAP1	Q5T5Y3	1602 aa		32.77	■■■□□ 2.84
JRK-208	ENST00000591357	MYO3A	Q8NEV4	1616 aa		32.77	■■■□□ 2.84
JRK-208	ENST00000591357	TNR	Q92752	1358 aa		32.77	■■■□□ 2.84
JRK-208	ENST00000591357	PTPRT	O14522	1441 aa		32.77	■■■□□ 2.84
JRK-208	ENST00000591357	ANKRD30A	Q9BXX3	1397 aa		32.76	■■■□□ 2.83
JRK-208	ENST00000591357	ABCC3	O15438	1527 aa		32.76	■■■□□ 2.83
JRK-208	ENST00000591357	NCKAP5L	Q9HCH0	1330 aa		32.76	■■■□□ 2.83
JRK-208	ENST00000591357	ERBIN	Q96RT1	1412 aa		32.75	■■■□□ 2.83
JRK-208	ENST00000591357	FBXO41	Q8TF61	875 aa		32.74	■■■□□ 2.83
JRK-208	ENST00000591357	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.74	■■■□□ 2.83
JRK-208	ENST00000591357	ZNF142	P52746	1687 aa	Predicted RBP	32.72	■■■□□ 2.83
JRK-208	ENST00000591357	A2ML1	A8K2U0	1454 aa		32.72	■■■□□ 2.83
JRK-208	ENST00000591357	CERK	Q8TCT0	537 aa		32.71	■■■□□ 2.83
JRK-208	ENST00000591357	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.69	■■■□□ 2.82
JRK-208	ENST00000591357	ADGRL2	O95490	1459 aa		32.68	■■■□□ 2.82
JRK-208	ENST00000591357	PKD2	Q13563	968 aa		32.66	■■■□□ 2.82
JRK-208	ENST00000591357	ZC3H13	Q5T200	1668 aa	Known RBP	32.66	■■■□□ 2.82
JRK-208	ENST00000591357	PLA2R1	Q13018	1463 aa		32.65	■■■□□ 2.82
JRK-208	ENST00000591357	CEP152	O94986	1710 aa		32.63	■■■□□ 2.81
JRK-208	ENST00000591357	PRDM15	P57071	1507 aa	Predicted RBP	32.61	■■■□□ 2.81
JRK-208	ENST00000591357	SPATA31D1	Q6ZQQ2	1576 aa		32.6	■■■□□ 2.81
JRK-208	ENST00000591357	ERVK-7	P63135	1459 aa		32.59	■■■□□ 2.81
JRK-208	ENST00000591357	NLRP1	Q9C000	1473 aa		32.59	■■■□□ 2.81
JRK-208	ENST00000591357	CFAP65	Q6ZU64	1925 aa	Known RBP	32.59	■■■□□ 2.81
JRK-208	ENST00000591357	DEPDC5	O75140	1603 aa		32.59	■■■□□ 2.81
JRK-208	ENST00000591357	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.58	■■■□□ 2.81
JRK-208	ENST00000591357	ARHGAP31	Q2M1Z3	1444 aa		32.58	■■■□□ 2.81
JRK-208	ENST00000591357	KANK1	Q14678	1352 aa		32.56	■■■□□ 2.8
JRK-208	ENST00000591357	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.54	■■■□□ 2.8
JRK-208	ENST00000591357	ANKRD50	Q9ULJ7	1429 aa		32.53	■■■□□ 2.8
JRK-208	ENST00000591357	VWDE	Q8N2E2	1590 aa		32.53	■■■□□ 2.8
JRK-208	ENST00000591357	UGGT1	Q9NYU2	1555 aa		32.51	■■■□□ 2.79
JRK-208	ENST00000591357	LTBP4	Q8N2S1	1624 aa		32.51	■■■□□ 2.79
JRK-208	ENST00000591357	ITGAE	P38570	1179 aa		32.5	■■■□□ 2.79
JRK-208	ENST00000591357	ANKLE2	Q86XL3	938 aa		32.49	■■■□□ 2.79
JRK-208	ENST00000591357	LMTK2	Q8IWU2	1503 aa		32.49	■■■□□ 2.79
JRK-208	ENST00000591357	ROCK1	Q13464	1354 aa		32.48	■■■□□ 2.79
JRK-208	ENST00000591357	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.47	■■■□□ 2.79
JRK-208	ENST00000591357	NEURL4	Q96JN8	1562 aa		32.42	■■■□□ 2.78
JRK-208	ENST00000591357	IDI1	Q13907	227 aa		32.39	■■■□□ 2.78
JRK-208	ENST00000591357	RRBP1	Q9P2E9	1410 aa	Known RBP	32.37	■■■□□ 2.77
JRK-208	ENST00000591357	POLR1A	O95602	1720 aa	Predicted RBP	32.37	■■■□□ 2.77
JRK-208	ENST00000591357	MED14	O60244	1454 aa		32.35	■■■□□ 2.77
JRK-208	ENST00000591357	NOS1	P29475	1434 aa		32.34	■■■□□ 2.77
JRK-208	ENST00000591357	UBR1	Q8IWV7	1749 aa		32.34	■■■□□ 2.77
JRK-208	ENST00000591357	EFCAB6	Q5THR3	1501 aa		32.33	■■■□□ 2.77
JRK-208	ENST00000591357	NPHP4	O75161	1426 aa	Predicted RBP	32.33	■■■□□ 2.77
JRK-208	ENST00000591357	LTK	P29376	864 aa		32.32	■■■□□ 2.76
JRK-208	ENST00000591357	SYNM	O15061	1565 aa		32.29	■■■□□ 2.76
JRK-208	ENST00000591357	UNC13B	O14795	1591 aa		32.28	■■■□□ 2.76
JRK-208	ENST00000591357	TXNDC2	Q86VQ3	553 aa		32.28	■■■□□ 2.76
JRK-208	ENST00000591357	ARHGAP23	Q9P227	1491 aa		32.28	■■■□□ 2.76
JRK-208	ENST00000591357	PIK3C2B	O00750	1634 aa		32.27	■■■□□ 2.76
JRK-208	ENST00000591357	IQSEC2	Q5JU85	1478 aa		32.27	■■■□□ 2.76
JRK-208	ENST00000591357	SLC52A1	Q9NWF4	448 aa		32.26	■■■□□ 2.75
JRK-208	ENST00000591357	STAG3	Q9UJ98	1225 aa		32.25	■■■□□ 2.75
JRK-208	ENST00000591357	SLIT1	O75093	1534 aa		32.25	■■■□□ 2.75
JRK-208	ENST00000591357	RPRD2	Q5VT52	1461 aa	Known RBP	32.24	■■■□□ 2.75
JRK-208	ENST00000591357	NUP155	O75694	1391 aa		32.23	■■■□□ 2.75
JRK-208	ENST00000591357	TET3	O43151	1660 aa		32.23	■■■□□ 2.75
JRK-208	ENST00000591357	TMEM2	Q9UHN6	1383 aa		32.21	■■■□□ 2.75
JRK-208	ENST00000591357	SCAF11	Q99590	1463 aa	Known RBP	32.21	■■■□□ 2.75
JRK-208	ENST00000591357	EID1	Q9Y6B2	187 aa		32.19	■■■□□ 2.74
JRK-208	ENST00000591357	IQGAP1	P46940	1657 aa		32.18	■■■□□ 2.74
JRK-208	ENST00000591357	IQGAP3	Q86VI3	1631 aa		32.16	■■■□□ 2.74
JRK-208	ENST00000591357	GCC2	Q8IWJ2	1684 aa		32.16	■■■□□ 2.74
JRK-208	ENST00000591357	KDM5A	P29375	1690 aa	Known RBP	32.15	■■■□□ 2.74
JRK-208	ENST00000591357	NAIP	Q13075	1403 aa		32.14	■■■□□ 2.74
JRK-208	ENST00000591357		E9PCH4	1651 aa		32.13	■■■□□ 2.73
JRK-208	ENST00000591357	CPS1	P31327	1500 aa		32.12	■■■□□ 2.73
JRK-208	ENST00000591357	UBAP1L	F5GYI3	381 aa		32.12	■■■□□ 2.73
JRK-208	ENST00000591357	ADGRB3	O60242	1522 aa		32.09	■■■□□ 2.73
JRK-208	ENST00000591357	STRCP1	A6NGW2	1772 aa		32.07	■■■□□ 2.72
JRK-208	ENST00000591357	CHGA	P10645	457 aa	Known RBP	32.03	■■■□□ 2.72
JRK-208	ENST00000591357	TMEM131L	A2VDJ0	1609 aa		32.02	■■■□□ 2.72
JRK-208	ENST00000591357	SLC26A8	Q96RN1	970 aa		32.01	■■■□□ 2.71
JRK-208	ENST00000591357	HFM1	A2PYH4	1435 aa		32	■■■□□ 2.71
JRK-208	ENST00000591357	MYO5B	Q9ULV0	1848 aa		32	■■■□□ 2.71
JRK-208	ENST00000591357	ZFYVE9	O95405	1425 aa		32	■■■□□ 2.71
JRK-208	ENST00000591357	LRRC7	Q96NW7	1537 aa		31.99	■■■□□ 2.71
JRK-208	ENST00000591357	RIMS2	Q9UQ26	1411 aa		31.97	■■■□□ 2.71
JRK-208	ENST00000591357	HDGF	P51858	240 aa	Known RBP	31.96	■■■□□ 2.71
JRK-208	ENST00000591357	TOM1	O60784	492 aa		31.95	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms