RNA–Protein interactions for RNA: ENST00000591357.5

JRK-208, Transcript of Jrk helix-turn-helix protein, humanhuman

TSL 4

Gene JRK, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-208ENST00000591357 NISCHQ9Y2I1 1504 aa52.27■■■■■ 5.96
JRK-208ENST00000591357 CCDC180Q9P1Z9 1646 aa46.51■■■■■ 5.04
JRK-208ENST00000591357 ABCC9O60706 1549 aa46.12■■■■■ 4.97
JRK-208ENST00000591357 RB1CC1Q8TDY2 1594 aa44.05■■■■■ 4.64
JRK-208ENST00000591357 DCAF8L2P0C7V8 631 aa43.98■■■■■ 4.63
JRK-208ENST00000591357 NACADO15069 1562 aa43.92■■■■■ 4.62
JRK-208ENST00000591357 MYO15BQ96JP2 1530 aa43.52■■■■■ 4.56
JRK-208ENST00000591357 ZCCHC6Q5VYS8 1495 aaKnown RBP43.39■■■■■ 4.54
JRK-208ENST00000591357 DCAF1Q9Y4B6 1507 aa43.17■■■■■ 4.5
JRK-208ENST00000591357 PABPN1Q86U42 306 aaKnown RBP eCLIP43.13■■■■■ 4.49
JRK-208ENST00000591357 UNC13AQ9UPW8 1703 aa43.07■■■■■ 4.49
JRK-208ENST00000591357 DNAJC5BQ9UF47 199 aa42.96■■■■■ 4.47
JRK-208ENST00000591357 BICRAQ9NZM4 1560 aa42.84■■■■■ 4.45
JRK-208ENST00000591357 SCRIBQ14160 1630 aa42.48■■■■■ 4.39
JRK-208ENST00000591357 SHROOM4Q9ULL8 1493 aa42.18■■■■■ 4.34
JRK-208ENST00000591357 EIF4G1Q04637 1599 aaKnown RBP41.69■■■■■ 4.26
JRK-208ENST00000591357 CC2D2AQ9P2K1 1620 aa41.66■■■■■ 4.26
JRK-208ENST00000591357 CECR2Q9BXF3 1484 aa41.47■■■■■ 4.23
JRK-208ENST00000591357 NCAPD3P42695 1498 aa40.62■■■■■ 4.09
JRK-208ENST00000591357 SMARCA4P51532 1647 aa40.6■■■■■ 4.09
JRK-208ENST00000591357 ATAD2BQ9ULI0 1458 aa40.58■■■■■ 4.09
JRK-208ENST00000591357 BAZ1AQ9NRL2 1556 aaPredicted RBP40.47■■■■■ 4.07
JRK-208ENST00000591357 SMARCA2P51531 1590 aa40.39■■■■■ 4.06
JRK-208ENST00000591357 MROH2BQ7Z745 1585 aa40.31■■■■■ 4.04
JRK-208ENST00000591357 HMGXB3Q12766 1538 aa40.26■■■■■ 4.03
JRK-208ENST00000591357 PEG3Q9GZU2 1588 aa40.21■■■■■ 4.03
JRK-208ENST00000591357 BAZ1BQ9UIG0 1483 aaKnown RBP40.13■■■■■ 4.02
JRK-208ENST00000591357 WIZO95785 1651 aa39.82■■■■□ 3.96
JRK-208ENST00000591357 NESP48681 1621 aa39.8■■■■□ 3.96
JRK-208ENST00000591357 RSF1Q96T23 1441 aaPredicted RBP39.7■■■■□ 3.95
JRK-208ENST00000591357 ERCC6Q03468 1493 aa39.69■■■■□ 3.94
JRK-208ENST00000591357 LAMC3Q9Y6N6 1575 aa39.52■■■■□ 3.92
JRK-208ENST00000591357 CUX2O14529 1486 aa39.45■■■■□ 3.91
JRK-208ENST00000591357 CADPSQ9ULU8 1353 aa39.43■■■■□ 3.9
JRK-208ENST00000591357 PDS5BQ9NTI5 1447 aa39.32■■■■□ 3.89
JRK-208ENST00000591357 TOP2AP11388 1531 aaKnown RBP39.3■■■■□ 3.88
JRK-208ENST00000591357 KIF21AQ7Z4S6 1674 aa39.2■■■■□ 3.87
JRK-208ENST00000591357 THOC2Q8NI27 1593 aaKnown RBP39.18■■■■□ 3.86
JRK-208ENST00000591357 CFTRP13569 1480 aa39.06■■■■□ 3.84
JRK-208ENST00000591357 CCDC88BA6NC98 1476 aa38.97■■■■□ 3.83
JRK-208ENST00000591357 DNAJC5Q9H3Z4 198 aa38.96■■■■□ 3.83
JRK-208ENST00000591357 FANCD2Q9BXW9 1451 aa38.92■■■■□ 3.82
JRK-208ENST00000591357 MRC2Q9UBG0 1479 aa38.92■■■■□ 3.82
JRK-208ENST00000591357 CEP164Q9UPV0 1460 aa38.86■■■■□ 3.81
JRK-208ENST00000591357 WDR62O43379 1518 aa38.79■■■■□ 3.8
JRK-208ENST00000591357 URB2Q14146 1524 aaKnown RBP38.59■■■■□ 3.77
JRK-208ENST00000591357 PRDM2Q13029 1718 aa38.55■■■■□ 3.76
JRK-208ENST00000591357 SUPT5HO00267 1087 aaKnown RBP38.42■■■■□ 3.74
JRK-208ENST00000591357 TOPBP1Q92547 1522 aa38.26■■■■□ 3.72
JRK-208ENST00000591357 ABCC8Q09428 1581 aa38.18■■■■□ 3.7
JRK-208ENST00000591357 DNMBPQ6XZF7 1577 aa38.1■■■■□ 3.69
JRK-208ENST00000591357 IFT140Q96RY7 1462 aa38.09■■■■□ 3.69
JRK-208ENST00000591357 ZNF608Q9ULD9 1512 aaPredicted RBP38.04■■■■□ 3.68
JRK-208ENST00000591357 POLA1P09884 1462 aaPredicted RBP37.9■■■■□ 3.66
JRK-208ENST00000591357 OSCARQ8IYS5 282 aa37.87■■■■□ 3.65
JRK-208ENST00000591357 TARBP1Q13395 1621 aaKnown RBP37.86■■■■□ 3.65
JRK-208ENST00000591357 RAD54L2Q9Y4B4 1467 aa37.81■■■■□ 3.64
JRK-208ENST00000591357 CUX1P39880 1505 aa37.81■■■■□ 3.64
JRK-208ENST00000591357 SOGA1O94964 1423 aa37.79■■■■□ 3.64
JRK-208ENST00000591357 AQRO60306 1485 aaKnown RBP eCLIP37.79■■■■□ 3.648e-6■■■■□ 23.2
JRK-208ENST00000591357 EIF4G3O43432 1585 aaKnown RBP37.74■■■■□ 3.63
JRK-208ENST00000591357 FGD5Q6ZNL6 1462 aa37.73■■■■□ 3.63
JRK-208ENST00000591357 TDRD9Q8NDG6 1382 aaKnown RBP37.67■■■■□ 3.62
JRK-208ENST00000591357 FBLN2P98095 1184 aa37.43■■■■□ 3.58
JRK-208ENST00000591357 TRIM41Q8WV44 630 aa37.42■■■■□ 3.58
JRK-208ENST00000591357 WDR97A6NE52 1622 aa37.42■■■■□ 3.58
JRK-208ENST00000591357 WRNQ14191 1432 aaPredicted RBP eCLIP37.38■■■■□ 3.57
JRK-208ENST00000591357 CHD1O14646 1710 aa37.35■■■■□ 3.57
JRK-208ENST00000591357 ABCA10Q8WWZ4 1543 aa37.35■■■■□ 3.57
JRK-208ENST00000591357 SNAPC4Q5SXM2 1469 aa37.34■■■■□ 3.57
JRK-208ENST00000591357 GRIN2BQ13224 1484 aa37.33■■■■□ 3.57
JRK-208ENST00000591357 TOP2BQ02880 1626 aa37.31■■■■□ 3.56
JRK-208ENST00000591357 SYNJ1O43426 1573 aa37.3■■■■□ 3.56
JRK-208ENST00000591357 BIVM-ERCC5R4GMW8 1640 aa37.29■■■■□ 3.56
JRK-208ENST00000591357 GAPVD1Q14C86 1478 aa37.29■■■■□ 3.56
JRK-208ENST00000591357 CHMP7Q8WUX9 453 aaPredicted RBP37.25■■■■□ 3.55
JRK-208ENST00000591357 MAGI1Q96QZ7 1491 aaPredicted RBP37.25■■■■□ 3.55
JRK-208ENST00000591357 RIMBP3CA6NJZ7 1639 aa37.21■■■■□ 3.55
JRK-208ENST00000591357 RIMBP3BA6NNM3 1639 aa37.21■■■■□ 3.55
JRK-208ENST00000591357 RIMBP3Q9UFD9 1639 aa37.21■■■■□ 3.55
JRK-208ENST00000591357 ABCA5Q8WWZ7 1642 aa37.19■■■■□ 3.54
JRK-208ENST00000591357 ARHGEF11O15085 1522 aa37.15■■■■□ 3.54
JRK-208ENST00000591357 PBRM1Q86U86 1689 aa37.14■■■■□ 3.54
JRK-208ENST00000591357 SYNJ2O15056 1496 aa37.13■■■■□ 3.53
JRK-208ENST00000591357 CLASP1Q7Z460 1538 aa36.99■■■■□ 3.51
JRK-208ENST00000591357 CYB5RLQ6IPT4 315 aa36.97■■■■□ 3.51
JRK-208ENST00000591357 ARAP1Q96P48 1450 aa36.86■■■■□ 3.49
JRK-208ENST00000591357 ERICH3Q5RHP9 1530 aa36.85■■■■□ 3.49
JRK-208ENST00000591357 FHAD1B1AJZ9 1412 aa36.85■■■■□ 3.49
JRK-208ENST00000591357 ADAMTS12P58397 1594 aa36.84■■■■□ 3.49
JRK-208ENST00000591357 GRIN2AQ12879 1464 aa36.84■■■■□ 3.49
JRK-208ENST00000591357 NUP160Q12769 1436 aa36.73■■■■□ 3.47
JRK-208ENST00000591357 CEP170Q5SW79 1584 aa36.69■■■■□ 3.46
JRK-208ENST00000591357 IGF1RP08069 1367 aa36.67■■■■□ 3.46
JRK-208ENST00000591357 KIF27Q86VH2 1401 aa36.62■■■■□ 3.45
JRK-208ENST00000591357 ERCC6L2Q5T890 1561 aa36.53■■■■□ 3.44
JRK-208ENST00000591357 JPH4Q96JJ6 628 aa36.47■■■■□ 3.43
JRK-208ENST00000591357 SHROOM2Q13796 1616 aa36.45■■■■□ 3.43
JRK-208ENST00000591357 CARMIL1Q5VZK9 1371 aa36.39■■■■□ 3.42
JRK-208ENST00000591357 CUL7Q14999 1698 aa36.36■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms