RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PPP6R1Q9UPN7 881 aa28.23■■■□□ 2.11
DDX39A-212ENST00000590260 PTPRKQ15262 1439 aa28.23■■■□□ 2.11
DDX39A-212ENST00000590260 FAM50AQ14320 339 aaKnown RBP28.22■■■□□ 2.11
DDX39A-212ENST00000590260 KDM5DQ9BY66 1539 aa28.22■■■□□ 2.11
DDX39A-212ENST00000590260 ADGRL2O95490 1459 aa28.21■■■□□ 2.11
DDX39A-212ENST00000590260 RRP7BPQ9NSQ0 103 aa28.21■■■□□ 2.11
DDX39A-212ENST00000590260 CHIC2Q9UKJ5 165 aa28.21■■■□□ 2.11
DDX39A-212ENST00000590260 NCOA1Q15788 1441 aa28.2■■■□□ 2.11
DDX39A-212ENST00000590260 FAM135AQ9P2D6 1515 aa28.2■■■□□ 2.1
DDX39A-212ENST00000590260 SETD1BQ9UPS6 1966 aaKnown RBP28.19■■■□□ 2.1
DDX39A-212ENST00000590260 NPATQ14207 1427 aa28.18■■■□□ 2.1
DDX39A-212ENST00000590260 ERBINQ96RT1 1412 aa28.17■■■□□ 2.1
DDX39A-212ENST00000590260 UHRF1BP1Q6BDS2 1440 aa28.16■■■□□ 2.1
DDX39A-212ENST00000590260 ABCC3O15438 1527 aa28.15■■■□□ 2.1
DDX39A-212ENST00000590260 DEPDC5O75140 1603 aa28.14■■■□□ 2.1
DDX39A-212ENST00000590260 ANKRD30AQ9BXX3 1397 aa28.13■■■□□ 2.09
DDX39A-212ENST00000590260 PRDM15P57071 1507 aaPredicted RBP28.13■■■□□ 2.09
DDX39A-212ENST00000590260 CEP152O94986 1710 aa28.12■■■□□ 2.09
DDX39A-212ENST00000590260 MYO3AQ8NEV4 1616 aa28.12■■■□□ 2.09
DDX39A-212ENST00000590260 ZC3H13Q5T200 1668 aaKnown RBP28.12■■■□□ 2.09
DDX39A-212ENST00000590260 WASHC2CQ9Y4E1 1318 aa28.11■■■□□ 2.09
DDX39A-212ENST00000590260 PZPP20742 1482 aa28.1■■■□□ 2.09
DDX39A-212ENST00000590260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.1■■■□□ 2.094e-9■□□□□ 10.2
DDX39A-212ENST00000590260 FBXO31Q5XUX0 539 aaPredicted RBP28.09■■■□□ 2.09
DDX39A-212ENST00000590260 STRCQ7RTU9 1775 aa28.09■■■□□ 2.09
DDX39A-212ENST00000590260 RRBP1Q9P2E9 1410 aaKnown RBP28.08■■■□□ 2.09
DDX39A-212ENST00000590260 ZNF142P52746 1687 aaPredicted RBP28.07■■■□□ 2.08
DDX39A-212ENST00000590260 CAMSAP1Q5T5Y3 1602 aa28.06■■■□□ 2.08
DDX39A-212ENST00000590260 VWDEQ8N2E2 1590 aa28.05■■■□□ 2.08
DDX39A-212ENST00000590260 CEP170BQ9Y4F5 1589 aaPredicted RBP28.03■■■□□ 2.08
DDX39A-212ENST00000590260 ANKRD50Q9ULJ7 1429 aa28■■■□□ 2.07
DDX39A-212ENST00000590260 ROCK1Q13464 1354 aa27.99■■■□□ 2.07
DDX39A-212ENST00000590260 SPATA31D1Q6ZQQ2 1576 aa27.99■■■□□ 2.07
DDX39A-212ENST00000590260 TNRQ92752 1358 aa27.98■■■□□ 2.07
DDX39A-212ENST00000590260 ITGAEP38570 1179 aa27.96■■■□□ 2.07
DDX39A-212ENST00000590260 LMTK2Q8IWU2 1503 aa27.96■■■□□ 2.07
DDX39A-212ENST00000590260 ERVK-7P63135 1459 aa27.95■■■□□ 2.07
DDX39A-212ENST00000590260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.95■■■□□ 2.068e-8■■■■□ 19.3
DDX39A-212ENST00000590260 A2ML1A8K2U0 1454 aa27.95■■■□□ 2.06
DDX39A-212ENST00000590260 ARHGAP31Q2M1Z3 1444 aa27.93■■■□□ 2.06
DDX39A-212ENST00000590260 UNC13BO14795 1591 aa27.92■■■□□ 2.06
DDX39A-212ENST00000590260 CFAP65Q6ZU64 1925 aaKnown RBP27.9■■■□□ 2.06
DDX39A-212ENST00000590260 EFCAB6Q5THR3 1501 aa27.87■■■□□ 2.05
DDX39A-212ENST00000590260 KANK1Q14678 1352 aa27.86■■■□□ 2.05
DDX39A-212ENST00000590260 PLA2R1Q13018 1463 aa27.86■■■□□ 2.05
DDX39A-212ENST00000590260 NLRP1Q9C000 1473 aa27.86■■■□□ 2.05
DDX39A-212ENST00000590260 NCKAP5LQ9HCH0 1330 aa27.82■■■□□ 2.04
DDX39A-212ENST00000590260 PTPRTO14522 1441 aa27.82■■■□□ 2.04
DDX39A-212ENST00000590260 SYNMO15061 1565 aa27.81■■■□□ 2.04
DDX39A-212ENST00000590260 TET3O43151 1660 aa27.81■■■□□ 2.04
DDX39A-212ENST00000590260 UGGT1Q9NYU2 1555 aa27.8■■■□□ 2.04
DDX39A-212ENST00000590260 IQGAP3Q86VI3 1631 aa27.79■■■□□ 2.04
DDX39A-212ENST00000590260 UBR1Q8IWV7 1749 aa27.78■■■□□ 2.04
DDX39A-212ENST00000590260 GCC2Q8IWJ2 1684 aa27.78■■■□□ 2.04
DDX39A-212ENST00000590260 NAIPQ13075 1403 aa27.78■■■□□ 2.04
DDX39A-212ENST00000590260 NEURL4Q96JN8 1562 aa27.77■■■□□ 2.04
DDX39A-212ENST00000590260 NOS1P29475 1434 aa27.77■■■□□ 2.04
DDX39A-212ENST00000590260 POLR1AO95602 1720 aaPredicted RBP27.75■■■□□ 2.03
DDX39A-212ENST00000590260 E9PCH4 1651 aa27.75■■■□□ 2.03
DDX39A-212ENST00000590260 PIK3C2BO00750 1634 aa27.74■■■□□ 2.03
DDX39A-212ENST00000590260 DMRT2Q9Y5R5 561 aa27.73■■■□□ 2.03
DDX39A-212ENST00000590260 RPRD2Q5VT52 1461 aaKnown RBP27.7■■■□□ 2.03
DDX39A-212ENST00000590260 PKD2Q13563 968 aa27.7■■■□□ 2.02
DDX39A-212ENST00000590260 HFM1A2PYH4 1435 aa27.69■■■□□ 2.02
DDX39A-212ENST00000590260 THEMISQ8N1K5 641 aaPredicted RBP27.68■■■□□ 2.02
DDX39A-212ENST00000590260 NUP155O75694 1391 aa27.68■■■□□ 2.02
DDX39A-212ENST00000590260 LTBP4Q8N2S1 1624 aa27.67■■■□□ 2.02
DDX39A-212ENST00000590260 IDI1Q13907 227 aa27.66■■■□□ 2.02
DDX39A-212ENST00000590260 ARHGAP23Q9P227 1491 aa27.65■■■□□ 2.02
DDX39A-212ENST00000590260 KDM5AP29375 1690 aaKnown RBP27.64■■■□□ 2.02
DDX39A-212ENST00000590260 MED14O60244 1454 aa27.64■■■□□ 2.01
DDX39A-212ENST00000590260 SLIT1O75093 1534 aa27.63■■■□□ 2.01
DDX39A-212ENST00000590260 ILDR1Q86SU0 546 aaPredicted RBP27.62■■■□□ 2.01
DDX39A-212ENST00000590260 ADGRB3O60242 1522 aa27.6■■■□□ 2.01
DDX39A-212ENST00000590260 ANKLE2Q86XL3 938 aa27.59■■■□□ 2.01
DDX39A-212ENST00000590260 CERKQ8TCT0 537 aa27.58■■■□□ 2.01
DDX39A-212ENST00000590260 LTKP29376 864 aa27.57■■■□□ 2
DDX39A-212ENST00000590260 ZNF335Q9H4Z2 1342 aaPredicted RBP27.57■■■□□ 2
DDX39A-212ENST00000590260 NPHP4O75161 1426 aaPredicted RBP27.57■■■□□ 2
DDX39A-212ENST00000590260 IQGAP1P46940 1657 aa27.56■■■□□ 2
DDX39A-212ENST00000590260 MYO5BQ9ULV0 1848 aa27.56■■■□□ 2
DDX39A-212ENST00000590260 TMEM131LA2VDJ0 1609 aa27.55■■■□□ 2
DDX39A-212ENST00000590260 SLC52A1Q9NWF4 448 aa27.54■■■□□ 2
DDX39A-212ENST00000590260 TMEM2Q9UHN6 1383 aa27.54■■■□□ 2
DDX39A-212ENST00000590260 SCAF11Q99590 1463 aaKnown RBP27.53■■■□□ 2
DDX39A-212ENST00000590260 SPHKAPQ2M3C7 1700 aa27.52■■■□□ 2
DDX39A-212ENST00000590260 FBXO41Q8TF61 875 aa27.49■■□□□ 1.99
DDX39A-212ENST00000590260 TXNDC2Q86VQ3 553 aa27.47■■□□□ 1.99
DDX39A-212ENST00000590260 STRCP1A6NGW2 1772 aa27.46■■□□□ 1.99
DDX39A-212ENST00000590260 ZFYVE9O95405 1425 aa27.46■■□□□ 1.99
DDX39A-212ENST00000590260 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.98
DDX39A-212ENST00000590260 CLTCL1P53675 1640 aa27.42■■□□□ 1.98
DDX39A-212ENST00000590260 TRIM52Q96A61 297 aa27.42■■□□□ 1.98
DDX39A-212ENST00000590260 TRPM2O94759 1503 aa27.41■■□□□ 1.98
DDX39A-212ENST00000590260 IQSEC2Q5JU85 1478 aa27.38■■□□□ 1.97
DDX39A-212ENST00000590260 EID1Q9Y6B2 187 aa27.38■■□□□ 1.97
DDX39A-212ENST00000590260 SETD5Q9C0A6 1442 aa27.38■■□□□ 1.97
DDX39A-212ENST00000590260 RIMS2Q9UQ26 1411 aa27.38■■□□□ 1.97
DDX39A-212ENST00000590260 CPS1P31327 1500 aa27.35■■□□□ 1.97
DDX39A-212ENST00000590260 SLC4A1APQ9BWU0 796 aaKnown RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms