RNA–Protein interactions for RNA: ENST00000590249.5

GHDC-210, Transcript of GH3 domain containing, humanhuman

TSL 4

Gene GHDC, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-210ENST00000590249 FGD6Q6ZV73 1430 aa24.61■■□□□ 1.53
GHDC-210ENST00000590249 CEP170BQ9Y4F5 1589 aaPredicted RBP24.6■■□□□ 1.53
GHDC-210ENST00000590249 EIF2AK4Q9P2K8 1649 aaKnown RBP24.6■■□□□ 1.53
GHDC-210ENST00000590249 CAMSAP1Q5T5Y3 1602 aa24.59■■□□□ 1.53
GHDC-210ENST00000590249 NCOA1Q15788 1441 aa24.59■■□□□ 1.53
GHDC-210ENST00000590249 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.53
GHDC-210ENST00000590249 DNMT1P26358 1616 aaKnown RBP24.58■■□□□ 1.53
GHDC-210ENST00000590249 ABCC5O15440 1437 aa24.58■■□□□ 1.53
GHDC-210ENST00000590249 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.52
GHDC-210ENST00000590249 MROH1Q8NDA8 1641 aa24.57■■□□□ 1.52
GHDC-210ENST00000590249 PZPP20742 1482 aa24.55■■□□□ 1.52
GHDC-210ENST00000590249 FBXO41Q8TF61 875 aa24.54■■□□□ 1.52
GHDC-210ENST00000590249 DUOX2Q9NRD8 1548 aa24.54■■□□□ 1.52
GHDC-210ENST00000590249 DAPK1P53355 1430 aa24.53■■□□□ 1.52
GHDC-210ENST00000590249 ZC3H13Q5T200 1668 aaKnown RBP24.53■■□□□ 1.52
GHDC-210ENST00000590249 PTPRTO14522 1441 aa24.52■■□□□ 1.52
GHDC-210ENST00000590249 ABCC3O15438 1527 aa24.52■■□□□ 1.52
GHDC-210ENST00000590249 CEP152O94986 1710 aa24.51■■□□□ 1.51
GHDC-210ENST00000590249 FBXO31Q5XUX0 539 aaPredicted RBP24.5■■□□□ 1.51
GHDC-210ENST00000590249 WASHC2CQ9Y4E1 1318 aa24.5■■□□□ 1.51
GHDC-210ENST00000590249 KIF15Q9NS87 1388 aa24.5■■□□□ 1.51
GHDC-210ENST00000590249 DMRT2Q9Y5R5 561 aa24.49■■□□□ 1.51
GHDC-210ENST00000590249 A2ML1A8K2U0 1454 aa24.49■■□□□ 1.51
GHDC-210ENST00000590249 PLA2R1Q13018 1463 aa24.48■■□□□ 1.51
GHDC-210ENST00000590249 TNRQ92752 1358 aa24.48■■□□□ 1.51
GHDC-210ENST00000590249 CERKQ8TCT0 537 aa24.46■■□□□ 1.51
GHDC-210ENST00000590249 PRDM15P57071 1507 aaPredicted RBP24.45■■□□□ 1.51
GHDC-210ENST00000590249 ERBINQ96RT1 1412 aa24.44■■□□□ 1.5
GHDC-210ENST00000590249 NCKAP5LQ9HCH0 1330 aa24.43■■□□□ 1.5
GHDC-210ENST00000590249 DEPDC5O75140 1603 aa24.43■■□□□ 1.5
GHDC-210ENST00000590249 RRP7BPQ9NSQ0 103 aa24.42■■□□□ 1.5
GHDC-210ENST00000590249 SPATA31D1Q6ZQQ2 1576 aa24.42■■□□□ 1.5
GHDC-210ENST00000590249 LTBP4Q8N2S1 1624 aa24.41■■□□□ 1.5
GHDC-210ENST00000590249 POLR1AO95602 1720 aaPredicted RBP24.4■■□□□ 1.5
GHDC-210ENST00000590249 ERVK-7P63135 1459 aa24.38■■□□□ 1.49
GHDC-210ENST00000590249 CFAP65Q6ZU64 1925 aaKnown RBP24.38■■□□□ 1.49
GHDC-210ENST00000590249 CHIC2Q9UKJ5 165 aa24.38■■□□□ 1.49
GHDC-210ENST00000590249 NLRP1Q9C000 1473 aa24.38■■□□□ 1.49
GHDC-210ENST00000590249 ANKRD30AQ9BXX3 1397 aa24.37■■□□□ 1.49
GHDC-210ENST00000590249 ADGRL2O95490 1459 aa24.37■■□□□ 1.49
GHDC-210ENST00000590249 NEURL4Q96JN8 1562 aa24.37■■□□□ 1.49
GHDC-210ENST00000590249 FAM50AQ14320 339 aaKnown RBP24.35■■□□□ 1.49
GHDC-210ENST00000590249 PKD2Q13563 968 aa24.34■■□□□ 1.49
GHDC-210ENST00000590249 UGGT1Q9NYU2 1555 aa24.33■■□□□ 1.49
GHDC-210ENST00000590249 VWDEQ8N2E2 1590 aa24.31■■□□□ 1.48
GHDC-210ENST00000590249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
GHDC-210ENST00000590249 ARHGAP31Q2M1Z3 1444 aa24.29■■□□□ 1.48
GHDC-210ENST00000590249 ZNF335Q9H4Z2 1342 aaPredicted RBP24.29■■□□□ 1.48
GHDC-210ENST00000590249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.28■■□□□ 1.48
GHDC-210ENST00000590249 UBR1Q8IWV7 1749 aa24.27■■□□□ 1.48
GHDC-210ENST00000590249 LMTK2Q8IWU2 1503 aa24.27■■□□□ 1.48
GHDC-210ENST00000590249 PPARGC1BQ86YN6 1023 aaKnown RBP24.24■■□□□ 1.47
GHDC-210ENST00000590249 KANK1Q14678 1352 aa24.24■■□□□ 1.47
GHDC-210ENST00000590249 IQSEC2Q5JU85 1478 aa24.23■■□□□ 1.47
GHDC-210ENST00000590249 EFCAB6Q5THR3 1501 aa24.23■■□□□ 1.47
GHDC-210ENST00000590249 ANKRD50Q9ULJ7 1429 aa24.22■■□□□ 1.47
GHDC-210ENST00000590249 THEMISQ8N1K5 641 aaPredicted RBP24.22■■□□□ 1.47
GHDC-210ENST00000590249 PIK3C2BO00750 1634 aa24.21■■□□□ 1.47
GHDC-210ENST00000590249 IQGAP1P46940 1657 aa24.2■■□□□ 1.46
GHDC-210ENST00000590249 MED14O60244 1454 aa24.19■■□□□ 1.46
GHDC-210ENST00000590249 SYNMO15061 1565 aa24.19■■□□□ 1.46
GHDC-210ENST00000590249 UNC13BO14795 1591 aa24.18■■□□□ 1.46
GHDC-210ENST00000590249 ANKLE2Q86XL3 938 aa24.18■■□□□ 1.46
GHDC-210ENST00000590249 NPHP4O75161 1426 aaPredicted RBP24.18■■□□□ 1.46
GHDC-210ENST00000590249 TET3O43151 1660 aa24.14■■□□□ 1.45
GHDC-210ENST00000590249 ROCK1Q13464 1354 aa24.14■■□□□ 1.45
GHDC-210ENST00000590249 ARHGAP23Q9P227 1491 aa24.13■■□□□ 1.45
GHDC-210ENST00000590249 SLIT1O75093 1534 aa24.13■■□□□ 1.45
GHDC-210ENST00000590249 NOS1P29475 1434 aa24.12■■□□□ 1.45
GHDC-210ENST00000590249 SCAF11Q99590 1463 aaKnown RBP24.12■■□□□ 1.45
GHDC-210ENST00000590249 GCC2Q8IWJ2 1684 aa24.11■■□□□ 1.45
GHDC-210ENST00000590249 KDM5AP29375 1690 aaKnown RBP24.11■■□□□ 1.45
GHDC-210ENST00000590249 CPS1P31327 1500 aa24.1■■□□□ 1.45
GHDC-210ENST00000590249 STRCP1A6NGW2 1772 aa24.1■■□□□ 1.45
GHDC-210ENST00000590249 ITGAEP38570 1179 aa24.08■■□□□ 1.45
GHDC-210ENST00000590249 RPRD2Q5VT52 1461 aaKnown RBP24.07■■□□□ 1.44
GHDC-210ENST00000590249 ADGRB3O60242 1522 aa24.07■■□□□ 1.44
GHDC-210ENST00000590249 IQGAP3Q86VI3 1631 aa24.06■■□□□ 1.44
GHDC-210ENST00000590249 E9PCH4 1651 aa24.05■■□□□ 1.44
GHDC-210ENST00000590249 LTKP29376 864 aa24.05■■□□□ 1.44
GHDC-210ENST00000590249 RRBP1Q9P2E9 1410 aaKnown RBP24.04■■□□□ 1.44
GHDC-210ENST00000590249 IDI1Q13907 227 aa24.04■■□□□ 1.44
GHDC-210ENST00000590249 TMEM2Q9UHN6 1383 aa24.03■■□□□ 1.44
GHDC-210ENST00000590249 MYO5BQ9ULV0 1848 aa24.03■■□□□ 1.44
GHDC-210ENST00000590249 UBAP1LF5GYI3 381 aa24■■□□□ 1.43
GHDC-210ENST00000590249 TXNDC2Q86VQ3 553 aa24■■□□□ 1.43
GHDC-210ENST00000590249 STAG3Q9UJ98 1225 aa23.99■■□□□ 1.43
GHDC-210ENST00000590249 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.43
GHDC-210ENST00000590249 LRRC7Q96NW7 1537 aa23.95■■□□□ 1.43
GHDC-210ENST00000590249 EID1Q9Y6B2 187 aa23.95■■□□□ 1.42
GHDC-210ENST00000590249 ALKQ9UM73 1620 aa23.95■■□□□ 1.42
GHDC-210ENST00000590249 NUP155O75694 1391 aa23.94■■□□□ 1.42
GHDC-210ENST00000590249 SLC52A1Q9NWF4 448 aa23.94■■□□□ 1.42
GHDC-210ENST00000590249 ZFYVE9O95405 1425 aa23.91■■□□□ 1.42
GHDC-210ENST00000590249 XIRP1Q702N8 1843 aaKnown RBP23.91■■□□□ 1.42
GHDC-210ENST00000590249 SPHKAPQ2M3C7 1700 aa23.88■■□□□ 1.41
GHDC-210ENST00000590249 NAIPQ13075 1403 aa23.88■■□□□ 1.41
GHDC-210ENST00000590249 RIMS2Q9UQ26 1411 aa23.85■■□□□ 1.41
GHDC-210ENST00000590249 PIP4K2BP78356 416 aa23.84■■□□□ 1.41
GHDC-210ENST00000590249 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms