RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 PLA2R1Q13018 1463 aa25.77■■□□□ 1.72
MBD3-206ENST00000589901 PKD2Q13563 968 aa25.76■■□□□ 1.71
MBD3-206ENST00000589901 WASHC2CQ9Y4E1 1318 aa25.76■■□□□ 1.71
MBD3-206ENST00000589901 MAP3K1Q13233 1512 aa25.75■■□□□ 1.71
MBD3-206ENST00000589901 KDM5DQ9BY66 1539 aa25.75■■□□□ 1.71
MBD3-206ENST00000589901 TCOF1Q13428 1488 aaKnown RBP25.74■■□□□ 1.71
MBD3-206ENST00000589901 A2ML1A8K2U0 1454 aa25.73■■□□□ 1.71
MBD3-206ENST00000589901 ZNF335Q9H4Z2 1342 aaPredicted RBP25.73■■□□□ 1.71
MBD3-206ENST00000589901 TNRQ92752 1358 aa25.72■■□□□ 1.71
MBD3-206ENST00000589901 PZPP20742 1482 aa25.72■■□□□ 1.71
MBD3-206ENST00000589901 MYOM3Q5VTT5 1437 aa25.71■■□□□ 1.71
MBD3-206ENST00000589901 FAM135AQ9P2D6 1515 aa25.7■■□□□ 1.7
MBD3-206ENST00000589901 MIA2Q96PC5 1412 aa25.7■■□□□ 1.7
MBD3-206ENST00000589901 DNMT1P26358 1616 aaKnown RBP25.69■■□□□ 1.7
MBD3-206ENST00000589901 MAST1Q9Y2H9 1570 aa25.67■■□□□ 1.7
MBD3-206ENST00000589901 IQSEC2Q5JU85 1478 aa25.66■■□□□ 1.7
MBD3-206ENST00000589901 RNF17Q9BXT8 1623 aaKnown RBP25.6■■□□□ 1.69
MBD3-206ENST00000589901 APLP2Q06481 763 aa25.6■■□□□ 1.69
MBD3-206ENST00000589901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.59■■□□□ 1.69
MBD3-206ENST00000589901 ABCC3O15438 1527 aa25.59■■□□□ 1.69
MBD3-206ENST00000589901 NLRP1Q9C000 1473 aa25.58■■□□□ 1.69
MBD3-206ENST00000589901 THEMISQ8N1K5 641 aaPredicted RBP25.56■■□□□ 1.68
MBD3-206ENST00000589901 NEURL4Q96JN8 1562 aa25.56■■□□□ 1.68
MBD3-206ENST00000589901 EIF2AK4Q9P2K8 1649 aaKnown RBP25.55■■□□□ 1.68
MBD3-206ENST00000589901 UBAP1LF5GYI3 381 aa25.55■■□□□ 1.68
MBD3-206ENST00000589901 ANKLE2Q86XL3 938 aa25.55■■□□□ 1.68
MBD3-206ENST00000589901 MROH1Q8NDA8 1641 aa25.55■■□□□ 1.68
MBD3-206ENST00000589901 ABCC5O15440 1437 aa25.54■■□□□ 1.68
MBD3-206ENST00000589901 DUOX2Q9NRD8 1548 aa25.54■■□□□ 1.68
MBD3-206ENST00000589901 UGGT1Q9NYU2 1555 aa25.54■■□□□ 1.68
MBD3-206ENST00000589901 RRP7BPQ9NSQ0 103 aa25.53■■□□□ 1.68
MBD3-206ENST00000589901 KIF15Q9NS87 1388 aa25.53■■□□□ 1.68
MBD3-206ENST00000589901 DISP3Q9P2K9 1392 aa25.52■■□□□ 1.68
MBD3-206ENST00000589901 PTPN23Q9H3S7 1636 aa25.51■■□□□ 1.67
MBD3-206ENST00000589901 ZC3H13Q5T200 1668 aaKnown RBP25.51■■□□□ 1.67
MBD3-206ENST00000589901 POLR1AO95602 1720 aaPredicted RBP25.51■■□□□ 1.67
MBD3-206ENST00000589901 ERVK-7P63135 1459 aa25.5■■□□□ 1.67
MBD3-206ENST00000589901 SPATA31D1Q6ZQQ2 1576 aa25.5■■□□□ 1.67
MBD3-206ENST00000589901 SHANK2Q9UPX8 1470 aa25.5■■□□□ 1.67
MBD3-206ENST00000589901 FGD6Q6ZV73 1430 aa25.48■■□□□ 1.67
MBD3-206ENST00000589901 DAPK1P53355 1430 aa25.47■■□□□ 1.67
MBD3-206ENST00000589901 NPHP4O75161 1426 aaPredicted RBP25.46■■□□□ 1.67
MBD3-206ENST00000589901 ERBINQ96RT1 1412 aa25.46■■□□□ 1.67
MBD3-206ENST00000589901 CEP152O94986 1710 aa25.45■■□□□ 1.66
MBD3-206ENST00000589901 MED14O60244 1454 aa25.45■■□□□ 1.66
MBD3-206ENST00000589901 CROCC2H7BZ55 1655 aa25.45■■□□□ 1.66
MBD3-206ENST00000589901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.44■■□□□ 1.662e-7■□□□□ 9.9
MBD3-206ENST00000589901 CHIC2Q9UKJ5 165 aa25.44■■□□□ 1.66
MBD3-206ENST00000589901 PRDM15P57071 1507 aaPredicted RBP25.42■■□□□ 1.66
MBD3-206ENST00000589901 DEPDC5O75140 1603 aa25.42■■□□□ 1.66
MBD3-206ENST00000589901 ILDR2Q71H61 639 aa25.42■■□□□ 1.66
MBD3-206ENST00000589901 CPS1P31327 1500 aa25.42■■□□□ 1.66
MBD3-206ENST00000589901 VWDEQ8N2E2 1590 aa25.41■■□□□ 1.66
MBD3-206ENST00000589901 ARHGAP31Q2M1Z3 1444 aa25.39■■□□□ 1.66
MBD3-206ENST00000589901 ANKRD30AQ9BXX3 1397 aa25.38■■□□□ 1.65
MBD3-206ENST00000589901 PIP4K2BP78356 416 aa25.36■■□□□ 1.65
MBD3-206ENST00000589901 SCAF1Q9H7N4 1312 aaKnown RBP25.36■■□□□ 1.65
MBD3-206ENST00000589901 IQGAP1P46940 1657 aa25.35■■□□□ 1.65
MBD3-206ENST00000589901 KANK1Q14678 1352 aa25.34■■□□□ 1.65
MBD3-206ENST00000589901 CFAP65Q6ZU64 1925 aaKnown RBP25.34■■□□□ 1.65
MBD3-206ENST00000589901 TOM1O60784 492 aa25.33■■□□□ 1.65
MBD3-206ENST00000589901 UBR1Q8IWV7 1749 aa25.33■■□□□ 1.65
MBD3-206ENST00000589901 LTKP29376 864 aa25.32■■□□□ 1.64
MBD3-206ENST00000589901 FAM50AQ14320 339 aaKnown RBP25.31■■□□□ 1.64
MBD3-206ENST00000589901 SCAF11Q99590 1463 aaKnown RBP25.3■■□□□ 1.64
MBD3-206ENST00000589901 TXNDC2Q86VQ3 553 aa25.3■■□□□ 1.64
MBD3-206ENST00000589901 ARHGAP23Q9P227 1491 aa25.29■■□□□ 1.64
MBD3-206ENST00000589901 HSPA1LP34931 641 aa25.29■■□□□ 1.64
MBD3-206ENST00000589901 SLIT1O75093 1534 aa25.27■■□□□ 1.64
MBD3-206ENST00000589901 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
MBD3-206ENST00000589901 ADGRL2O95490 1459 aa25.27■■□□□ 1.64
MBD3-206ENST00000589901 STAG3Q9UJ98 1225 aa25.25■■□□□ 1.63
MBD3-206ENST00000589901 LRRC7Q96NW7 1537 aa25.25■■□□□ 1.63
MBD3-206ENST00000589901 STRCP1A6NGW2 1772 aa25.25■■□□□ 1.63
MBD3-206ENST00000589901 PIK3C2BO00750 1634 aa25.24■■□□□ 1.63
MBD3-206ENST00000589901 IDI1Q13907 227 aa25.24■■□□□ 1.63
MBD3-206ENST00000589901 EID1Q9Y6B2 187 aa25.24■■□□□ 1.63
MBD3-206ENST00000589901 TMEM2Q9UHN6 1383 aa25.23■■□□□ 1.63
MBD3-206ENST00000589901 ALKQ9UM73 1620 aa25.23■■□□□ 1.63
MBD3-206ENST00000589901 SOCS7O14512 581 aa25.21■■□□□ 1.63
MBD3-206ENST00000589901 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
MBD3-206ENST00000589901 SYNMO15061 1565 aa25.19■■□□□ 1.62
MBD3-206ENST00000589901 EFCAB6Q5THR3 1501 aa25.19■■□□□ 1.62
MBD3-206ENST00000589901 NOS1P29475 1434 aa25.19■■□□□ 1.62
MBD3-206ENST00000589901 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
MBD3-206ENST00000589901 SLC52A1Q9NWF4 448 aa25.13■■□□□ 1.61
MBD3-206ENST00000589901 KDM5AP29375 1690 aaKnown RBP25.11■■□□□ 1.61
MBD3-206ENST00000589901 SLC26A8Q96RN1 970 aa25.1■■□□□ 1.61
MBD3-206ENST00000589901 ADGRB3O60242 1522 aa25.09■■□□□ 1.61
MBD3-206ENST00000589901 RPRD2Q5VT52 1461 aaKnown RBP25.09■■□□□ 1.61
MBD3-206ENST00000589901 MED1Q15648 1581 aaPredicted RBP25.07■■□□□ 1.6
MBD3-206ENST00000589901 PPARGC1BQ86YN6 1023 aaKnown RBP25.06■■□□□ 1.6
MBD3-206ENST00000589901 TET3O43151 1660 aa25.06■■□□□ 1.6
MBD3-206ENST00000589901 KCNA6P17658 529 aa25.05■■□□□ 1.6
MBD3-206ENST00000589901 ROCK1Q13464 1354 aa25.04■■□□□ 1.6
MBD3-206ENST00000589901 ITGAEP38570 1179 aa25.03■■□□□ 1.6
MBD3-206ENST00000589901 BCANQ96GW7 911 aa25.03■■□□□ 1.6
MBD3-206ENST00000589901 TMEM94Q12767 1356 aa25.03■■□□□ 1.6
MBD3-206ENST00000589901 RBM33Q96EV2 1170 aaKnown RBP25.02■■□□□ 1.6
MBD3-206ENST00000589901 UNC13BO14795 1591 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms