RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.4
DDX39A-210ENST00000589675 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-210ENST00000589675 KDM5DQ9BY66 1539 aa17.56■□□□□ 0.4
DDX39A-210ENST00000589675 PLA2R1Q13018 1463 aa17.55■□□□□ 0.4
DDX39A-210ENST00000589675 PZPP20742 1482 aa17.53■□□□□ 0.4
DDX39A-210ENST00000589675 APLP2Q06481 763 aa17.53■□□□□ 0.4
DDX39A-210ENST00000589675 RNF17Q9BXT8 1623 aaKnown RBP17.53■□□□□ 0.4
DDX39A-210ENST00000589675 WASHC2CQ9Y4E1 1318 aa17.52■□□□□ 0.4
DDX39A-210ENST00000589675 EIF2AK4Q9P2K8 1649 aaKnown RBP17.52■□□□□ 0.4
DDX39A-210ENST00000589675 PKD2Q13563 968 aa17.52■□□□□ 0.4
DDX39A-210ENST00000589675 A2ML1A8K2U0 1454 aa17.51■□□□□ 0.39
DDX39A-210ENST00000589675 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
DDX39A-210ENST00000589675 DNMT1P26358 1616 aaKnown RBP17.5■□□□□ 0.39
DDX39A-210ENST00000589675 LTBP4Q8N2S1 1624 aa17.5■□□□□ 0.39
DDX39A-210ENST00000589675 ZC3H13Q5T200 1668 aaKnown RBP17.48■□□□□ 0.39
DDX39A-210ENST00000589675 PTPN23Q9H3S7 1636 aa17.48■□□□□ 0.39
DDX39A-210ENST00000589675 TNRQ92752 1358 aa17.48■□□□□ 0.39
DDX39A-210ENST00000589675 SHANK2Q9UPX8 1470 aa17.48■□□□□ 0.39
DDX39A-210ENST00000589675 NCKAP5LQ9HCH0 1330 aa17.47■□□□□ 0.39
DDX39A-210ENST00000589675 DUOX2Q9NRD8 1548 aa17.47■□□□□ 0.39
DDX39A-210ENST00000589675 FBXO31Q5XUX0 539 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-210ENST00000589675 IQSEC2Q5JU85 1478 aa17.47■□□□□ 0.39
DDX39A-210ENST00000589675 CROCC2H7BZ55 1655 aa17.47■□□□□ 0.39
DDX39A-210ENST00000589675 ABCC3O15438 1527 aa17.45■□□□□ 0.38
DDX39A-210ENST00000589675 ABCC5O15440 1437 aa17.45■□□□□ 0.38
DDX39A-210ENST00000589675 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
DDX39A-210ENST00000589675 MROH1Q8NDA8 1641 aa17.44■□□□□ 0.38
DDX39A-210ENST00000589675 FGD6Q6ZV73 1430 aa17.44■□□□□ 0.38
DDX39A-210ENST00000589675 POLR1AO95602 1720 aaPredicted RBP17.42■□□□□ 0.38
DDX39A-210ENST00000589675 KIF15Q9NS87 1388 aa17.41■□□□□ 0.38
DDX39A-210ENST00000589675 DAPK1P53355 1430 aa17.41■□□□□ 0.38
DDX39A-210ENST00000589675 ERBINQ96RT1 1412 aa17.41■□□□□ 0.38
DDX39A-210ENST00000589675 SPATA31D1Q6ZQQ2 1576 aa17.4■□□□□ 0.38
DDX39A-210ENST00000589675 THEMISQ8N1K5 641 aaPredicted RBP17.4■□□□□ 0.38
DDX39A-210ENST00000589675 PRDM15P57071 1507 aaPredicted RBP17.39■□□□□ 0.37
DDX39A-210ENST00000589675 CEP152O94986 1710 aa17.38■□□□□ 0.37
DDX39A-210ENST00000589675 UGGT1Q9NYU2 1555 aa17.38■□□□□ 0.37
DDX39A-210ENST00000589675 ZNF335Q9H4Z2 1342 aaPredicted RBP17.38■□□□□ 0.37
DDX39A-210ENST00000589675 CFAP65Q6ZU64 1925 aaKnown RBP17.37■□□□□ 0.37
DDX39A-210ENST00000589675 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
DDX39A-210ENST00000589675 DEPDC5O75140 1603 aa17.37■□□□□ 0.37
DDX39A-210ENST00000589675 RRP7BPQ9NSQ0 103 aa17.37■□□□□ 0.37
DDX39A-210ENST00000589675 ARHGAP31Q2M1Z3 1444 aa17.37■□□□□ 0.37
DDX39A-210ENST00000589675 ERVK-7P63135 1459 aa17.37■□□□□ 0.37
DDX39A-210ENST00000589675 ANKLE2Q86XL3 938 aa17.36■□□□□ 0.37
DDX39A-210ENST00000589675 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
DDX39A-210ENST00000589675 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.35■□□□□ 0.374e-9■□□□□ 10.2
DDX39A-210ENST00000589675 MED14O60244 1454 aa17.35■□□□□ 0.37
DDX39A-210ENST00000589675 ADGRL2O95490 1459 aa17.32■□□□□ 0.36
DDX39A-210ENST00000589675 KANK1Q14678 1352 aa17.31■□□□□ 0.36
DDX39A-210ENST00000589675 LMTK2Q8IWU2 1503 aa17.31■□□□□ 0.36
DDX39A-210ENST00000589675 UBR1Q8IWV7 1749 aa17.3■□□□□ 0.36
DDX39A-210ENST00000589675 CHIC2Q9UKJ5 165 aa17.3■□□□□ 0.36
DDX39A-210ENST00000589675 VWDEQ8N2E2 1590 aa17.3■□□□□ 0.36
DDX39A-210ENST00000589675 CPS1P31327 1500 aa17.3■□□□□ 0.36
DDX39A-210ENST00000589675 NPHP4O75161 1426 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-210ENST00000589675 IQGAP1P46940 1657 aa17.28■□□□□ 0.36
DDX39A-210ENST00000589675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.368e-8■■■□□ 18.7
DDX39A-210ENST00000589675 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
DDX39A-210ENST00000589675 KDM5AP29375 1690 aaKnown RBP17.25■□□□□ 0.35
DDX39A-210ENST00000589675 SLIT1O75093 1534 aa17.25■□□□□ 0.35
DDX39A-210ENST00000589675 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
DDX39A-210ENST00000589675 UBAP1LF5GYI3 381 aa17.24■□□□□ 0.35
DDX39A-210ENST00000589675 ANKRD50Q9ULJ7 1429 aa17.22■□□□□ 0.35
DDX39A-210ENST00000589675 SCAF11Q99590 1463 aaKnown RBP17.22■□□□□ 0.35
DDX39A-210ENST00000589675 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.35
DDX39A-210ENST00000589675 PIK3C2BO00750 1634 aa17.21■□□□□ 0.35
DDX39A-210ENST00000589675 NOS1P29475 1434 aa17.2■□□□□ 0.34
DDX39A-210ENST00000589675 RPRD2Q5VT52 1461 aaKnown RBP17.19■□□□□ 0.34
DDX39A-210ENST00000589675 LTKP29376 864 aa17.19■□□□□ 0.34
DDX39A-210ENST00000589675 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
DDX39A-210ENST00000589675 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
DDX39A-210ENST00000589675 TOM1O60784 492 aa17.18■□□□□ 0.34
DDX39A-210ENST00000589675 IDI1Q13907 227 aa17.18■□□□□ 0.34
DDX39A-210ENST00000589675 TXNDC2Q86VQ3 553 aa17.18■□□□□ 0.34
DDX39A-210ENST00000589675 EID1Q9Y6B2 187 aa17.18■□□□□ 0.34
DDX39A-210ENST00000589675 SYNMO15061 1565 aa17.18■□□□□ 0.34
DDX39A-210ENST00000589675 TMEM2Q9UHN6 1383 aa17.17■□□□□ 0.34
DDX39A-210ENST00000589675 SLC52A1Q9NWF4 448 aa17.17■□□□□ 0.34
DDX39A-210ENST00000589675 TET3O43151 1660 aa17.16■□□□□ 0.34
DDX39A-210ENST00000589675 UNC13BO14795 1591 aa17.15■□□□□ 0.34
DDX39A-210ENST00000589675 STAG3Q9UJ98 1225 aa17.15■□□□□ 0.34
DDX39A-210ENST00000589675 GCC2Q8IWJ2 1684 aa17.14■□□□□ 0.33
DDX39A-210ENST00000589675 LRRC7Q96NW7 1537 aa17.14■□□□□ 0.33
DDX39A-210ENST00000589675 DISP3Q9P2K9 1392 aa17.13■□□□□ 0.33
DDX39A-210ENST00000589675 ADGRB3O60242 1522 aa17.12■□□□□ 0.33
DDX39A-210ENST00000589675 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
DDX39A-210ENST00000589675 IQGAP3Q86VI3 1631 aa17.09■□□□□ 0.33
DDX39A-210ENST00000589675 E9PCH4 1651 aa17.07■□□□□ 0.32
DDX39A-210ENST00000589675 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
DDX39A-210ENST00000589675 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
DDX39A-210ENST00000589675 MYO5BQ9ULV0 1848 aa17.07■□□□□ 0.32
DDX39A-210ENST00000589675 HSPA1LP34931 641 aa17.06■□□□□ 0.32
DDX39A-210ENST00000589675 TMEM131LA2VDJ0 1609 aa17.06■□□□□ 0.32
DDX39A-210ENST00000589675 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
DDX39A-210ENST00000589675 ZFYVE9O95405 1425 aa17.04■□□□□ 0.32
DDX39A-210ENST00000589675 HDGFP51858 240 aaKnown RBP17.04■□□□□ 0.32
DDX39A-210ENST00000589675 KCNA6P17658 529 aa17.03■□□□□ 0.32
DDX39A-210ENST00000589675 PPARGC1BQ86YN6 1023 aaKnown RBP17.03■□□□□ 0.32
DDX39A-210ENST00000589675 NUP155O75694 1391 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms