RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 ILDR2Q71H61 639 aa25.9■■□□□ 1.74
RAB3D-202ENST00000589655 ARHGEF5Q12774 1597 aa25.89■■□□□ 1.73
RAB3D-202ENST00000589655 KDM5DQ9BY66 1539 aa25.88■■□□□ 1.73
RAB3D-202ENST00000589655 PZPP20742 1482 aa25.88■■□□□ 1.73
RAB3D-202ENST00000589655 RSPH4AQ5TD94 716 aa25.88■■□□□ 1.73
RAB3D-202ENST00000589655 FAM135AQ9P2D6 1515 aa25.87■■□□□ 1.73
RAB3D-202ENST00000589655 TNRQ92752 1358 aa25.86■■□□□ 1.73
RAB3D-202ENST00000589655 LRRC9Q6ZRR7 1453 aa25.85■■□□□ 1.73
RAB3D-202ENST00000589655 VPS8Q8N3P4 1428 aa25.84■■□□□ 1.73
RAB3D-202ENST00000589655 NEURL4Q96JN8 1562 aa25.84■■□□□ 1.73
RAB3D-202ENST00000589655 SPATA31D1Q6ZQQ2 1576 aa25.82■■□□□ 1.72
RAB3D-202ENST00000589655 WASHC2CQ9Y4E1 1318 aa25.82■■□□□ 1.72
RAB3D-202ENST00000589655 LOC105371045A0A1W2PR82 267 aa25.81■■□□□ 1.72
RAB3D-202ENST00000589655 POLR1AO95602 1720 aaPredicted RBP25.8■■□□□ 1.72
RAB3D-202ENST00000589655 UBAP1LF5GYI3 381 aa25.79■■□□□ 1.72
RAB3D-202ENST00000589655 TSPY4P0CV99 314 aa25.78■■□□□ 1.72
RAB3D-202ENST00000589655 TSPY10P0CW01 314 aa25.78■■□□□ 1.72
RAB3D-202ENST00000589655 KANK4Q5T7N3 995 aaPredicted RBP25.78■■□□□ 1.72
RAB3D-202ENST00000589655 MIA2Q96PC5 1412 aa25.78■■□□□ 1.72
RAB3D-202ENST00000589655 MAST1Q9Y2H9 1570 aa25.78■■□□□ 1.72
RAB3D-202ENST00000589655 RNF17Q9BXT8 1623 aaKnown RBP25.77■■□□□ 1.72
RAB3D-202ENST00000589655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.75■■□□□ 1.71
RAB3D-202ENST00000589655 NLRP1Q9C000 1473 aa25.73■■□□□ 1.71
RAB3D-202ENST00000589655 ABCC3O15438 1527 aa25.73■■□□□ 1.71
RAB3D-202ENST00000589655 MAP3K1Q13233 1512 aa25.73■■□□□ 1.71
RAB3D-202ENST00000589655 MROH1Q8NDA8 1641 aa25.71■■□□□ 1.71
RAB3D-202ENST00000589655 UGGT1Q9NYU2 1555 aa25.71■■□□□ 1.71
RAB3D-202ENST00000589655 SOCS7O14512 581 aa25.7■■□□□ 1.7
RAB3D-202ENST00000589655 SHANK2Q9UPX8 1470 aa25.7■■□□□ 1.7
RAB3D-202ENST00000589655 MYOM3Q5VTT5 1437 aa25.7■■□□□ 1.7
RAB3D-202ENST00000589655 ANKLE2Q86XL3 938 aa25.69■■□□□ 1.7
RAB3D-202ENST00000589655 EIF2AK4Q9P2K8 1649 aaKnown RBP25.69■■□□□ 1.7
RAB3D-202ENST00000589655 VWDEQ8N2E2 1590 aa25.69■■□□□ 1.7
RAB3D-202ENST00000589655 THEMISQ8N1K5 641 aaPredicted RBP25.68■■□□□ 1.7
RAB3D-202ENST00000589655 CPS1P31327 1500 aa25.68■■□□□ 1.7
RAB3D-202ENST00000589655 ZC3H13Q5T200 1668 aaKnown RBP25.68■■□□□ 1.7
RAB3D-202ENST00000589655 MED14O60244 1454 aa25.67■■□□□ 1.7
RAB3D-202ENST00000589655 DEPDC5O75140 1603 aa25.66■■□□□ 1.7
RAB3D-202ENST00000589655 ERVK-7P63135 1459 aa25.65■■□□□ 1.7
RAB3D-202ENST00000589655 NPHP4O75161 1426 aaPredicted RBP25.64■■□□□ 1.7
RAB3D-202ENST00000589655 CEP152O94986 1710 aa25.63■■□□□ 1.69
RAB3D-202ENST00000589655 DUOX2Q9NRD8 1548 aa25.6■■□□□ 1.69
RAB3D-202ENST00000589655 IQGAP1P46940 1657 aa25.6■■□□□ 1.69
RAB3D-202ENST00000589655 ALKQ9UM73 1620 aa25.59■■□□□ 1.69
RAB3D-202ENST00000589655 STRCP1A6NGW2 1772 aa25.57■■□□□ 1.68
RAB3D-202ENST00000589655 ABCC5O15440 1437 aa25.57■■□□□ 1.68
RAB3D-202ENST00000589655 HSPA1LP34931 641 aa25.57■■□□□ 1.68
RAB3D-202ENST00000589655 PIP4K2BP78356 416 aa25.57■■□□□ 1.68
RAB3D-202ENST00000589655 CFAP65Q6ZU64 1925 aaKnown RBP25.57■■□□□ 1.68
RAB3D-202ENST00000589655 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
RAB3D-202ENST00000589655 UBR1Q8IWV7 1749 aa25.55■■□□□ 1.68
RAB3D-202ENST00000589655 TOM1O60784 492 aa25.55■■□□□ 1.68
RAB3D-202ENST00000589655 KIF15Q9NS87 1388 aa25.55■■□□□ 1.68
RAB3D-202ENST00000589655 PRDM15P57071 1507 aaPredicted RBP25.54■■□□□ 1.68
RAB3D-202ENST00000589655 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
RAB3D-202ENST00000589655 PTPN23Q9H3S7 1636 aa25.53■■□□□ 1.68
RAB3D-202ENST00000589655 ARHGAP31Q2M1Z3 1444 aa25.51■■□□□ 1.67
RAB3D-202ENST00000589655 LRRC7Q96NW7 1537 aa25.5■■□□□ 1.67
RAB3D-202ENST00000589655 ERBINQ96RT1 1412 aa25.5■■□□□ 1.67
RAB3D-202ENST00000589655 RRP7BPQ9NSQ0 103 aa25.5■■□□□ 1.67
RAB3D-202ENST00000589655 ARHGAP23Q9P227 1491 aa25.48■■□□□ 1.67
RAB3D-202ENST00000589655 DAPK1P53355 1430 aa25.48■■□□□ 1.67
RAB3D-202ENST00000589655 LTKP29376 864 aa25.47■■□□□ 1.67
RAB3D-202ENST00000589655 MED1Q15648 1581 aaPredicted RBP25.47■■□□□ 1.67
RAB3D-202ENST00000589655 SLIT1O75093 1534 aa25.47■■□□□ 1.67
RAB3D-202ENST00000589655 SCAF11Q99590 1463 aaKnown RBP25.47■■□□□ 1.67
RAB3D-202ENST00000589655 FGD6Q6ZV73 1430 aa25.46■■□□□ 1.67
RAB3D-202ENST00000589655 SYNMO15061 1565 aa25.44■■□□□ 1.66
RAB3D-202ENST00000589655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.42■■□□□ 1.66
RAB3D-202ENST00000589655 PIK3C2BO00750 1634 aa25.41■■□□□ 1.66
RAB3D-202ENST00000589655 TXNDC2Q86VQ3 553 aa25.4■■□□□ 1.66
RAB3D-202ENST00000589655 APLP2Q06481 763 aa25.38■■□□□ 1.65
RAB3D-202ENST00000589655 CHIC2Q9UKJ5 165 aa25.38■■□□□ 1.65
RAB3D-202ENST00000589655 LMTK2Q8IWU2 1503 aa25.37■■□□□ 1.65
RAB3D-202ENST00000589655 TMEM2Q9UHN6 1383 aa25.36■■□□□ 1.65
RAB3D-202ENST00000589655 XIRP1Q702N8 1843 aaKnown RBP25.35■■□□□ 1.65
RAB3D-202ENST00000589655 ANKRD30AQ9BXX3 1397 aa25.35■■□□□ 1.65
RAB3D-202ENST00000589655 KANK1Q14678 1352 aa25.34■■□□□ 1.65
RAB3D-202ENST00000589655 IDI1Q13907 227 aa25.33■■□□□ 1.65
RAB3D-202ENST00000589655 KDM5AP29375 1690 aaKnown RBP25.32■■□□□ 1.64
RAB3D-202ENST00000589655 EID1Q9Y6B2 187 aa25.31■■□□□ 1.64
RAB3D-202ENST00000589655 EFCAB6Q5THR3 1501 aa25.31■■□□□ 1.64
RAB3D-202ENST00000589655 NOS1P29475 1434 aa25.3■■□□□ 1.64
RAB3D-202ENST00000589655 ADGRL2O95490 1459 aa25.3■■□□□ 1.64
RAB3D-202ENST00000589655 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
RAB3D-202ENST00000589655 TET3O43151 1660 aa25.26■■□□□ 1.63
RAB3D-202ENST00000589655 STAG3Q9UJ98 1225 aa25.26■■□□□ 1.63
RAB3D-202ENST00000589655 ADGRB3O60242 1522 aa25.23■■□□□ 1.63
RAB3D-202ENST00000589655 TMEM94Q12767 1356 aa25.2■■□□□ 1.63
RAB3D-202ENST00000589655 SLC26A8Q96RN1 970 aa25.2■■□□□ 1.62
RAB3D-202ENST00000589655 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
RAB3D-202ENST00000589655 KCNA6P17658 529 aa25.19■■□□□ 1.62
RAB3D-202ENST00000589655 FAM50AQ14320 339 aaKnown RBP25.19■■□□□ 1.62
RAB3D-202ENST00000589655 PHF23Q9BUL5 403 aaPredicted RBP25.19■■□□□ 1.62
RAB3D-202ENST00000589655 SLC52A1Q9NWF4 448 aa25.17■■□□□ 1.62
RAB3D-202ENST00000589655 RPRD2Q5VT52 1461 aaKnown RBP25.16■■□□□ 1.62
RAB3D-202ENST00000589655 FAM135BQ49AJ0 1406 aa25.16■■□□□ 1.62
RAB3D-202ENST00000589655 RBM33Q96EV2 1170 aaKnown RBP25.16■■□□□ 1.62
RAB3D-202ENST00000589655 NWD1Q149M9 1564 aa25.15■■□□□ 1.62
RAB3D-202ENST00000589655 MYO5BQ9ULV0 1848 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms