RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 RNF17Q9BXT8 1623 aaKnown RBP23.63■■□□□ 1.37
ERCC1-209ENST00000589214 MYO3AQ8NEV4 1616 aa23.62■■□□□ 1.37
ERCC1-209ENST00000589214 PPP6R1Q9UPN7 881 aa23.62■■□□□ 1.37
ERCC1-209ENST00000589214 DUOX2Q9NRD8 1548 aa23.61■■□□□ 1.37
ERCC1-209ENST00000589214 PTPRKQ15262 1439 aa23.6■■□□□ 1.37
ERCC1-209ENST00000589214 PPARGC1BQ86YN6 1023 aaKnown RBP23.59■■□□□ 1.37
ERCC1-209ENST00000589214 KIF15Q9NS87 1388 aa23.58■■□□□ 1.37
ERCC1-209ENST00000589214 ZNF142P52746 1687 aaPredicted RBP23.57■■□□□ 1.36
ERCC1-209ENST00000589214 MROH1Q8NDA8 1641 aa23.57■■□□□ 1.36
ERCC1-209ENST00000589214 STRCQ7RTU9 1775 aa23.57■■□□□ 1.36
ERCC1-209ENST00000589214 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
ERCC1-209ENST00000589214 CEP170BQ9Y4F5 1589 aaPredicted RBP23.54■■□□□ 1.36
ERCC1-209ENST00000589214 PZPP20742 1482 aa23.54■■□□□ 1.36
ERCC1-209ENST00000589214 WASHC2CQ9Y4E1 1318 aa23.54■■□□□ 1.36
ERCC1-209ENST00000589214 ABCC3O15438 1527 aa23.54■■□□□ 1.36
ERCC1-209ENST00000589214 ERBINQ96RT1 1412 aa23.53■■□□□ 1.36
ERCC1-209ENST00000589214 FAM50AQ14320 339 aaKnown RBP23.53■■□□□ 1.36
ERCC1-209ENST00000589214 CEP152O94986 1710 aa23.53■■□□□ 1.36
ERCC1-209ENST00000589214 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
ERCC1-209ENST00000589214 CAMSAP1Q5T5Y3 1602 aa23.51■■□□□ 1.35
ERCC1-209ENST00000589214 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
ERCC1-209ENST00000589214 ANKRD30AQ9BXX3 1397 aa23.5■■□□□ 1.35
ERCC1-209ENST00000589214 PRDM15P57071 1507 aaPredicted RBP23.49■■□□□ 1.35
ERCC1-209ENST00000589214 NCOA1Q15788 1441 aa23.49■■□□□ 1.35
ERCC1-209ENST00000589214 TNRQ92752 1358 aa23.47■■□□□ 1.35
ERCC1-209ENST00000589214 ADGRL2O95490 1459 aa23.47■■□□□ 1.35
ERCC1-209ENST00000589214 DEPDC5O75140 1603 aa23.47■■□□□ 1.35
ERCC1-209ENST00000589214 FBXO31Q5XUX0 539 aaPredicted RBP23.46■■□□□ 1.35
ERCC1-209ENST00000589214 A2ML1A8K2U0 1454 aa23.44■■□□□ 1.34
ERCC1-209ENST00000589214 ILDR1Q86SU0 546 aaPredicted RBP23.44■■□□□ 1.34
ERCC1-209ENST00000589214 SPATA31D1Q6ZQQ2 1576 aa23.41■■□□□ 1.34
ERCC1-209ENST00000589214 DMRT2Q9Y5R5 561 aa23.41■■□□□ 1.34
ERCC1-209ENST00000589214 PLA2R1Q13018 1463 aa23.41■■□□□ 1.34
ERCC1-209ENST00000589214 PTPRTO14522 1441 aa23.4■■□□□ 1.34
ERCC1-209ENST00000589214 ERVK-7P63135 1459 aa23.39■■□□□ 1.34
ERCC1-209ENST00000589214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.33
ERCC1-209ENST00000589214 NLRP1Q9C000 1473 aa23.36■■□□□ 1.33
ERCC1-209ENST00000589214 KANK1Q14678 1352 aa23.36■■□□□ 1.33
ERCC1-209ENST00000589214 VWDEQ8N2E2 1590 aa23.35■■□□□ 1.33
ERCC1-209ENST00000589214 NCKAP5LQ9HCH0 1330 aa23.34■■□□□ 1.33
ERCC1-209ENST00000589214 ANKRD50Q9ULJ7 1429 aa23.33■■□□□ 1.33
ERCC1-209ENST00000589214 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.33
ERCC1-209ENST00000589214 UGGT1Q9NYU2 1555 aa23.33■■□□□ 1.33
ERCC1-209ENST00000589214 CFAP65Q6ZU64 1925 aaKnown RBP23.33■■□□□ 1.32
ERCC1-209ENST00000589214 LMTK2Q8IWU2 1503 aa23.32■■□□□ 1.32
ERCC1-209ENST00000589214 ARHGAP31Q2M1Z3 1444 aa23.32■■□□□ 1.32
ERCC1-209ENST00000589214 ITGAEP38570 1179 aa23.3■■□□□ 1.32
ERCC1-209ENST00000589214 PKD2Q13563 968 aa23.29■■□□□ 1.32
ERCC1-209ENST00000589214 FBXO41Q8TF61 875 aa23.29■■□□□ 1.32
ERCC1-209ENST00000589214 EFCAB6Q5THR3 1501 aa23.28■■□□□ 1.32
ERCC1-209ENST00000589214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.28■■□□□ 1.32
ERCC1-209ENST00000589214 NEURL4Q96JN8 1562 aa23.28■■□□□ 1.32
ERCC1-209ENST00000589214 CERKQ8TCT0 537 aa23.28■■□□□ 1.32
ERCC1-209ENST00000589214 ROCK1Q13464 1354 aa23.27■■□□□ 1.32
ERCC1-209ENST00000589214 UNC13BO14795 1591 aa23.27■■□□□ 1.32
ERCC1-209ENST00000589214 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
ERCC1-209ENST00000589214 UBR1Q8IWV7 1749 aa23.25■■□□□ 1.31
ERCC1-209ENST00000589214 LTBP4Q8N2S1 1624 aa23.25■■□□□ 1.31
ERCC1-209ENST00000589214 THEMISQ8N1K5 641 aaPredicted RBP23.22■■□□□ 1.31
ERCC1-209ENST00000589214 TET3O43151 1660 aa23.22■■□□□ 1.31
ERCC1-209ENST00000589214 SYNMO15061 1565 aa23.21■■□□□ 1.31
ERCC1-209ENST00000589214 PIK3C2BO00750 1634 aa23.21■■□□□ 1.31
ERCC1-209ENST00000589214 GCC2Q8IWJ2 1684 aa23.19■■□□□ 1.3
ERCC1-209ENST00000589214 ZNF335Q9H4Z2 1342 aaPredicted RBP23.19■■□□□ 1.3
ERCC1-209ENST00000589214 ANKLE2Q86XL3 938 aa23.17■■□□□ 1.3
ERCC1-209ENST00000589214 IQGAP3Q86VI3 1631 aa23.17■■□□□ 1.3
ERCC1-209ENST00000589214 IQGAP1P46940 1657 aa23.16■■□□□ 1.3
ERCC1-209ENST00000589214 NPHP4O75161 1426 aaPredicted RBP23.16■■□□□ 1.3
ERCC1-209ENST00000589214 NOS1P29475 1434 aa23.16■■□□□ 1.3
ERCC1-209ENST00000589214 RPRD2Q5VT52 1461 aaKnown RBP23.15■■□□□ 1.3
ERCC1-209ENST00000589214 MED14O60244 1454 aa23.14■■□□□ 1.29
ERCC1-209ENST00000589214 E9PCH4 1651 aa23.12■■□□□ 1.29
ERCC1-209ENST00000589214 KDM5AP29375 1690 aaKnown RBP23.12■■□□□ 1.29
ERCC1-209ENST00000589214 SLIT1O75093 1534 aa23.12■■□□□ 1.29
ERCC1-209ENST00000589214 ARHGAP23Q9P227 1491 aa23.11■■□□□ 1.29
ERCC1-209ENST00000589214 ADGRB3O60242 1522 aa23.11■■□□□ 1.29
ERCC1-209ENST00000589214 SCAF11Q99590 1463 aaKnown RBP23.11■■□□□ 1.29
ERCC1-209ENST00000589214 IQSEC2Q5JU85 1478 aa23.1■■□□□ 1.29
ERCC1-209ENST00000589214 STAG3Q9UJ98 1225 aa23.09■■□□□ 1.29
ERCC1-209ENST00000589214 NUP155O75694 1391 aa23.08■■□□□ 1.29
ERCC1-209ENST00000589214 IDI1Q13907 227 aa23.07■■□□□ 1.28
ERCC1-209ENST00000589214 NAIPQ13075 1403 aa23.05■■□□□ 1.28
ERCC1-209ENST00000589214 TMEM2Q9UHN6 1383 aa23.04■■□□□ 1.28
ERCC1-209ENST00000589214 CPS1P31327 1500 aa23.04■■□□□ 1.28
ERCC1-209ENST00000589214 MYO5BQ9ULV0 1848 aa23.03■■□□□ 1.28
ERCC1-209ENST00000589214 LTKP29376 864 aa23.02■■□□□ 1.28
ERCC1-209ENST00000589214 TXNDC2Q86VQ3 553 aa23.02■■□□□ 1.28
ERCC1-209ENST00000589214 SLC52A1Q9NWF4 448 aa23.01■■□□□ 1.27
ERCC1-209ENST00000589214 EID1Q9Y6B2 187 aa23■■□□□ 1.27
ERCC1-209ENST00000589214 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
ERCC1-209ENST00000589214 STRCP1A6NGW2 1772 aa22.99■■□□□ 1.27
ERCC1-209ENST00000589214 TMEM131LA2VDJ0 1609 aa22.99■■□□□ 1.27
ERCC1-209ENST00000589214 SPHKAPQ2M3C7 1700 aa22.98■■□□□ 1.27
ERCC1-209ENST00000589214 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
ERCC1-209ENST00000589214 ZFYVE9O95405 1425 aa22.91■■□□□ 1.26
ERCC1-209ENST00000589214 UBAP1LF5GYI3 381 aa22.91■■□□□ 1.26
ERCC1-209ENST00000589214 RIMS2Q9UQ26 1411 aa22.91■■□□□ 1.26
ERCC1-209ENST00000589214 LRRC7Q96NW7 1537 aa22.88■■□□□ 1.25
ERCC1-209ENST00000589214 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
ERCC1-209ENST00000589214 TRPM2O94759 1503 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms