RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 TOM1O60784 492 aa17.92■□□□□ 0.46
CALR-206ENST00000588454 KIF3BO15066 747 aa17.91■□□□□ 0.46
CALR-206ENST00000588454 CPS1P31327 1500 aa17.91■□□□□ 0.46
CALR-206ENST00000588454 SHANK2Q9UPX8 1470 aa17.9■□□□□ 0.46
CALR-206ENST00000588454 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
CALR-206ENST00000588454 CEP162Q5TB80 1403 aa17.89■□□□□ 0.46
CALR-206ENST00000588454 POLR1AO95602 1720 aaPredicted RBP17.89■□□□□ 0.46
CALR-206ENST00000588454 PZPP20742 1482 aa17.89■□□□□ 0.45
CALR-206ENST00000588454 PIP4K2BP78356 416 aa17.89■□□□□ 0.45
CALR-206ENST00000588454 ANKLE2Q86XL3 938 aa17.89■□□□□ 0.45
CALR-206ENST00000588454 FAM135AQ9P2D6 1515 aa17.88■□□□□ 0.45
CALR-206ENST00000588454 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
CALR-206ENST00000588454 THEMISQ8N1K5 641 aaPredicted RBP17.88■□□□□ 0.45
CALR-206ENST00000588454 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
CALR-206ENST00000588454 WASHC2CQ9Y4E1 1318 aa17.88■□□□□ 0.45
CALR-206ENST00000588454 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
CALR-206ENST00000588454 MIA2Q96PC5 1412 aa17.87■□□□□ 0.45
CALR-206ENST00000588454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.86■□□□□ 0.452e-38■□□□□ 8.4
CALR-206ENST00000588454 KDM5DQ9BY66 1539 aa17.86■□□□□ 0.45
CALR-206ENST00000588454 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
CALR-206ENST00000588454 MED1Q15648 1581 aaPredicted RBP17.84■□□□□ 0.45
CALR-206ENST00000588454 VWDEQ8N2E2 1590 aa17.83■□□□□ 0.45
CALR-206ENST00000588454 MED14O60244 1454 aa17.83■□□□□ 0.45
CALR-206ENST00000588454 NLRP1Q9C000 1473 aa17.83■□□□□ 0.45
CALR-206ENST00000588454 NPHP4O75161 1426 aaPredicted RBP17.81■□□□□ 0.44
CALR-206ENST00000588454 DEPDC5O75140 1603 aa17.81■□□□□ 0.44
CALR-206ENST00000588454 UGGT1Q9NYU2 1555 aa17.81■□□□□ 0.44
CALR-206ENST00000588454 TSPY4P0CV99 314 aa17.8■□□□□ 0.44
CALR-206ENST00000588454 TSPY10P0CW01 314 aa17.8■□□□□ 0.44
CALR-206ENST00000588454 CAMSAP2Q08AD1 1489 aa17.8■□□□□ 0.44
CALR-206ENST00000588454 NCOA2Q15596 1464 aa17.8■□□□□ 0.44
CALR-206ENST00000588454 ALKQ9UM73 1620 aa17.8■□□□□ 0.44
CALR-206ENST00000588454 ARHGEF5Q12774 1597 aa17.76■□□□□ 0.43
CALR-206ENST00000588454 IQGAP1P46940 1657 aa17.75■□□□□ 0.43
CALR-206ENST00000588454 STRCP1A6NGW2 1772 aa17.74■□□□□ 0.43
CALR-206ENST00000588454 LRRC7Q96NW7 1537 aa17.73■□□□□ 0.43
CALR-206ENST00000588454 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
CALR-206ENST00000588454 RNF17Q9BXT8 1623 aaKnown RBP17.72■□□□□ 0.43
CALR-206ENST00000588454 ABCC3O15438 1527 aa17.72■□□□□ 0.43
CALR-206ENST00000588454 ERVK-7P63135 1459 aa17.69■□□□□ 0.42
CALR-206ENST00000588454 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
CALR-206ENST00000588454 CFAP65Q6ZU64 1925 aaKnown RBP17.68■□□□□ 0.42
CALR-206ENST00000588454 MAST1Q9Y2H9 1570 aa17.68■□□□□ 0.42
CALR-206ENST00000588454 SYNMO15061 1565 aa17.66■□□□□ 0.42
CALR-206ENST00000588454 EIF2AK4Q9P2K8 1649 aaKnown RBP17.66■□□□□ 0.42
CALR-206ENST00000588454 UBR1Q8IWV7 1749 aa17.65■□□□□ 0.42
CALR-206ENST00000588454 LTKP29376 864 aa17.65■□□□□ 0.42
CALR-206ENST00000588454 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
CALR-206ENST00000588454 MROH1Q8NDA8 1641 aa17.65■□□□□ 0.42
CALR-206ENST00000588454 SCAF11Q99590 1463 aaKnown RBP17.64■□□□□ 0.41
CALR-206ENST00000588454 TXNDC2Q86VQ3 553 aa17.64■□□□□ 0.41
CALR-206ENST00000588454 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
CALR-206ENST00000588454 ARHGAP23Q9P227 1491 aa17.63■□□□□ 0.41
CALR-206ENST00000588454 RGS17Q9UGC6 210 aaPredicted RBP17.62■□□□□ 0.41
CALR-206ENST00000588454 SLIT1O75093 1534 aa17.62■□□□□ 0.41
CALR-206ENST00000588454 CEP152O94986 1710 aa17.61■□□□□ 0.41
CALR-206ENST00000588454 ARHGAP31Q2M1Z3 1444 aa17.61■□□□□ 0.41
CALR-206ENST00000588454 DUOX2Q9NRD8 1548 aa17.59■□□□□ 0.41
CALR-206ENST00000588454 EID1Q9Y6B2 187 aa17.59■□□□□ 0.41
CALR-206ENST00000588454 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.41
CALR-206ENST00000588454 MYOM3Q5VTT5 1437 aa17.58■□□□□ 0.41
CALR-206ENST00000588454 KANK4Q5T7N3 995 aaPredicted RBP17.58■□□□□ 0.4
CALR-206ENST00000588454 FAM135BQ49AJ0 1406 aa17.56■□□□□ 0.4
CALR-206ENST00000588454 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
CALR-206ENST00000588454 MAP3K1Q13233 1512 aa17.55■□□□□ 0.4
CALR-206ENST00000588454 TMEM2Q9UHN6 1383 aa17.54■□□□□ 0.4
CALR-206ENST00000588454 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
CALR-206ENST00000588454 PRDM15P57071 1507 aaPredicted RBP17.53■□□□□ 0.4
CALR-206ENST00000588454 ERBINQ96RT1 1412 aa17.53■□□□□ 0.4
CALR-206ENST00000588454 PIK3C2BO00750 1634 aa17.52■□□□□ 0.4
CALR-206ENST00000588454 KCNA6P17658 529 aa17.52■□□□□ 0.4
CALR-206ENST00000588454 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.4
CALR-206ENST00000588454 ABCC5O15440 1437 aa17.51■□□□□ 0.39
CALR-206ENST00000588454 IDI1Q13907 227 aa17.51■□□□□ 0.39
CALR-206ENST00000588454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.393e-20■■□□□ 12.7
CALR-206ENST00000588454 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
CALR-206ENST00000588454 TMEM94Q12767 1356 aa17.51■□□□□ 0.39
CALR-206ENST00000588454 POTEAQ6S8J7 498 aa17.49■□□□□ 0.39
CALR-206ENST00000588454 KDM5AP29375 1690 aaKnown RBP17.48■□□□□ 0.39
CALR-206ENST00000588454 PROSER2Q86WR7 435 aaPredicted RBP17.48■□□□□ 0.39
CALR-206ENST00000588454 KANK1Q14678 1352 aa17.48■□□□□ 0.39
CALR-206ENST00000588454 TET3O43151 1660 aa17.48■□□□□ 0.39
CALR-206ENST00000588454 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
CALR-206ENST00000588454 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
CALR-206ENST00000588454 SLC26A8Q96RN1 970 aa17.46■□□□□ 0.39
CALR-206ENST00000588454 LMTK2Q8IWU2 1503 aa17.46■□□□□ 0.39
CALR-206ENST00000588454 CROCC2H7BZ55 1655 aa17.45■□□□□ 0.38
CALR-206ENST00000588454 RBM33Q96EV2 1170 aaKnown RBP17.44■□□□□ 0.38
CALR-206ENST00000588454 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
CALR-206ENST00000588454 NOS1P29475 1434 aa17.43■□□□□ 0.38
CALR-206ENST00000588454 DAPK1P53355 1430 aa17.43■□□□□ 0.38
CALR-206ENST00000588454 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
CALR-206ENST00000588454 SLC52A1Q9NWF4 448 aa17.42■□□□□ 0.38
CALR-206ENST00000588454 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
CALR-206ENST00000588454 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
CALR-206ENST00000588454 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
CALR-206ENST00000588454 CHIC2Q9UKJ5 165 aa17.4■□□□□ 0.38
CALR-206ENST00000588454 NWD1Q149M9 1564 aa17.39■□□□□ 0.37
CALR-206ENST00000588454 MSH6P52701 1360 aa17.38■□□□□ 0.37
CALR-206ENST00000588454 ADGRB3O60242 1522 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms