RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 KIF3BO15066 747 aa23.19■■□□□ 1.3
HDAC5-207ENST00000588261 FBXO31Q5XUX0 539 aaPredicted RBP23.19■■□□□ 1.3
HDAC5-207ENST00000588261 PLA2R1Q13018 1463 aa23.18■■□□□ 1.3
HDAC5-207ENST00000588261 SOCS7O14512 581 aa23.16■■□□□ 1.3
HDAC5-207ENST00000588261 RSPH4AQ5TD94 716 aa23.16■■□□□ 1.3
HDAC5-207ENST00000588261 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
HDAC5-207ENST00000588261 DNMT1P26358 1616 aaKnown RBP23.15■■□□□ 1.3
HDAC5-207ENST00000588261 A2ML1A8K2U0 1454 aa23.14■■□□□ 1.29
HDAC5-207ENST00000588261 PZPP20742 1482 aa23.14■■□□□ 1.29
HDAC5-207ENST00000588261 PKD2Q13563 968 aa23.14■■□□□ 1.29
HDAC5-207ENST00000588261 ILDR2Q71H61 639 aa23.14■■□□□ 1.29
HDAC5-207ENST00000588261 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.29
HDAC5-207ENST00000588261 ZNF335Q9H4Z2 1342 aaPredicted RBP23.13■■□□□ 1.29
HDAC5-207ENST00000588261 SPATA31D1Q6ZQQ2 1576 aa23.13■■□□□ 1.29
HDAC5-207ENST00000588261 MYOM3Q5VTT5 1437 aa23.12■■□□□ 1.29
HDAC5-207ENST00000588261 FAM135AQ9P2D6 1515 aa23.11■■□□□ 1.29
HDAC5-207ENST00000588261 TNRQ92752 1358 aa23.1■■□□□ 1.29
HDAC5-207ENST00000588261 MROH1Q8NDA8 1641 aa23.09■■□□□ 1.29
HDAC5-207ENST00000588261 RNF17Q9BXT8 1623 aaKnown RBP23.09■■□□□ 1.29
HDAC5-207ENST00000588261 MIA2Q96PC5 1412 aa23.08■■□□□ 1.29
HDAC5-207ENST00000588261 NEURL4Q96JN8 1562 aa23.08■■□□□ 1.29
HDAC5-207ENST00000588261 TSPY4P0CV99 314 aa23.07■■□□□ 1.28
HDAC5-207ENST00000588261 TSPY10P0CW01 314 aa23.07■■□□□ 1.28
HDAC5-207ENST00000588261 WASHC2CQ9Y4E1 1318 aa23.07■■□□□ 1.28
HDAC5-207ENST00000588261 ABCC3O15438 1527 aa23.05■■□□□ 1.28
HDAC5-207ENST00000588261 UBAP1LF5GYI3 381 aa23.04■■□□□ 1.28
HDAC5-207ENST00000588261 ABCC5O15440 1437 aa23.01■■□□□ 1.27
HDAC5-207ENST00000588261 EIF2AK4Q9P2K8 1649 aaKnown RBP23■■□□□ 1.27
HDAC5-207ENST00000588261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23■■□□□ 1.27
HDAC5-207ENST00000588261 POLR1AO95602 1720 aaPredicted RBP22.98■■□□□ 1.27
HDAC5-207ENST00000588261 NLRP1Q9C000 1473 aa22.98■■□□□ 1.27
HDAC5-207ENST00000588261 PTPN23Q9H3S7 1636 aa22.97■■□□□ 1.27
HDAC5-207ENST00000588261 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
HDAC5-207ENST00000588261 ERVK-7P63135 1459 aa22.96■■□□□ 1.27
HDAC5-207ENST00000588261 DUOX2Q9NRD8 1548 aa22.96■■□□□ 1.27
HDAC5-207ENST00000588261 ZC3H13Q5T200 1668 aaKnown RBP22.96■■□□□ 1.27
HDAC5-207ENST00000588261 CEP152O94986 1710 aa22.95■■□□□ 1.26
HDAC5-207ENST00000588261 UGGT1Q9NYU2 1555 aa22.95■■□□□ 1.26
HDAC5-207ENST00000588261 SHANK2Q9UPX8 1470 aa22.94■■□□□ 1.26
HDAC5-207ENST00000588261 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
HDAC5-207ENST00000588261 DAPK1P53355 1430 aa22.92■■□□□ 1.26
HDAC5-207ENST00000588261 FGD6Q6ZV73 1430 aa22.92■■□□□ 1.26
HDAC5-207ENST00000588261 KIF15Q9NS87 1388 aa22.92■■□□□ 1.26
HDAC5-207ENST00000588261 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
HDAC5-207ENST00000588261 MED14O60244 1454 aa22.92■■□□□ 1.26
HDAC5-207ENST00000588261 DEPDC5O75140 1603 aa22.9■■□□□ 1.26
HDAC5-207ENST00000588261 RRP7BPQ9NSQ0 103 aa22.89■■□□□ 1.25
HDAC5-207ENST00000588261 TOM1O60784 492 aa22.88■■□□□ 1.25
HDAC5-207ENST00000588261 THEMISQ8N1K5 641 aaPredicted RBP22.88■■□□□ 1.25
HDAC5-207ENST00000588261 NPHP4O75161 1426 aaPredicted RBP22.88■■□□□ 1.25
HDAC5-207ENST00000588261 ERBINQ96RT1 1412 aa22.88■■□□□ 1.25
HDAC5-207ENST00000588261 CPS1P31327 1500 aa22.87■■□□□ 1.25
HDAC5-207ENST00000588261 ANKLE2Q86XL3 938 aa22.87■■□□□ 1.25
HDAC5-207ENST00000588261 ALKQ9UM73 1620 aa22.85■■□□□ 1.25
HDAC5-207ENST00000588261 ARHGAP31Q2M1Z3 1444 aa22.84■■□□□ 1.25
HDAC5-207ENST00000588261 UBR1Q8IWV7 1749 aa22.84■■□□□ 1.25
HDAC5-207ENST00000588261 STRCP1A6NGW2 1772 aa22.84■■□□□ 1.25
HDAC5-207ENST00000588261 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.25
HDAC5-207ENST00000588261 CFAP65Q6ZU64 1925 aaKnown RBP22.83■■□□□ 1.25
HDAC5-207ENST00000588261 IQGAP1P46940 1657 aa22.83■■□□□ 1.24
HDAC5-207ENST00000588261 CHIC2Q9UKJ5 165 aa22.81■■□□□ 1.24
HDAC5-207ENST00000588261 PIP4K2BP78356 416 aa22.8■■□□□ 1.24
HDAC5-207ENST00000588261 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
HDAC5-207ENST00000588261 LTKP29376 864 aa22.78■■□□□ 1.24
HDAC5-207ENST00000588261 HSPA1LP34931 641 aa22.77■■□□□ 1.24
HDAC5-207ENST00000588261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.77■■□□□ 1.24
HDAC5-207ENST00000588261 SLIT1O75093 1534 aa22.77■■□□□ 1.24
HDAC5-207ENST00000588261 LMTK2Q8IWU2 1503 aa22.77■■□□□ 1.24
HDAC5-207ENST00000588261 ADGRL2O95490 1459 aa22.76■■□□□ 1.23
HDAC5-207ENST00000588261 PIK3C2BO00750 1634 aa22.75■■□□□ 1.23
HDAC5-207ENST00000588261 ANKRD30AQ9BXX3 1397 aa22.75■■□□□ 1.23
HDAC5-207ENST00000588261 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
HDAC5-207ENST00000588261 SCAF11Q99590 1463 aaKnown RBP22.74■■□□□ 1.23
HDAC5-207ENST00000588261 PPARGC1BQ86YN6 1023 aaKnown RBP22.74■■□□□ 1.23
HDAC5-207ENST00000588261 LRRC7Q96NW7 1537 aa22.73■■□□□ 1.23
HDAC5-207ENST00000588261 SYNMO15061 1565 aa22.73■■□□□ 1.23
HDAC5-207ENST00000588261 MED1Q15648 1581 aaPredicted RBP22.71■■□□□ 1.23
HDAC5-207ENST00000588261 NOS1P29475 1434 aa22.69■■□□□ 1.22
HDAC5-207ENST00000588261 EFCAB6Q5THR3 1501 aa22.68■■□□□ 1.22
HDAC5-207ENST00000588261 IDI1Q13907 227 aa22.68■■□□□ 1.22
HDAC5-207ENST00000588261 TMEM2Q9UHN6 1383 aa22.67■■□□□ 1.22
HDAC5-207ENST00000588261 TXNDC2Q86VQ3 553 aa22.67■■□□□ 1.22
HDAC5-207ENST00000588261 KANK1Q14678 1352 aa22.65■■□□□ 1.22
HDAC5-207ENST00000588261 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
HDAC5-207ENST00000588261 ANKRD50Q9ULJ7 1429 aa22.64■■□□□ 1.21
HDAC5-207ENST00000588261 PHF23Q9BUL5 403 aaPredicted RBP22.63■■□□□ 1.21
HDAC5-207ENST00000588261 KDM5AP29375 1690 aaKnown RBP22.62■■□□□ 1.21
HDAC5-207ENST00000588261 XIRP1Q702N8 1843 aaKnown RBP22.62■■□□□ 1.21
HDAC5-207ENST00000588261 TET3O43151 1660 aa22.6■■□□□ 1.21
HDAC5-207ENST00000588261 ADGRB3O60242 1522 aa22.59■■□□□ 1.21
HDAC5-207ENST00000588261 UNC13BO14795 1591 aa22.55■■□□□ 1.2
HDAC5-207ENST00000588261 EID1Q9Y6B2 187 aa22.55■■□□□ 1.2
HDAC5-207ENST00000588261 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
HDAC5-207ENST00000588261 STAG3Q9UJ98 1225 aa22.53■■□□□ 1.2
HDAC5-207ENST00000588261 ZFYVE9O95405 1425 aa22.53■■□□□ 1.2
HDAC5-207ENST00000588261 SLC26A8Q96RN1 970 aa22.52■■□□□ 1.2
HDAC5-207ENST00000588261 MYO5BQ9ULV0 1848 aa22.5■■□□□ 1.19
HDAC5-207ENST00000588261 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
HDAC5-207ENST00000588261 SLC52A1Q9NWF4 448 aa22.5■■□□□ 1.19
HDAC5-207ENST00000588261 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms