RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
HDAC5-207ENST00000588261 ABCC9O60706 1549 aa32.93■■■□□ 2.86
HDAC5-207ENST00000588261 CCDC180Q9P1Z9 1646 aa32.88■■■□□ 2.85
HDAC5-207ENST00000588261 RB1CC1Q8TDY2 1594 aa31.26■■■□□ 2.59
HDAC5-207ENST00000588261 NACADO15069 1562 aa31.08■■■□□ 2.57
HDAC5-207ENST00000588261 DNAJC5BQ9UF47 199 aa30.99■■■□□ 2.55
HDAC5-207ENST00000588261 DCAF8L2P0C7V8 631 aa30.87■■■□□ 2.53
HDAC5-207ENST00000588261 MYO15BQ96JP2 1530 aa30.69■■■□□ 2.5
HDAC5-207ENST00000588261 PABPN1Q86U42 306 aaKnown RBP eCLIP30.68■■■□□ 2.57e-8■□□□□ 9.1
HDAC5-207ENST00000588261 UNC13AQ9UPW8 1703 aa30.66■■■□□ 2.5
HDAC5-207ENST00000588261 BICRAQ9NZM4 1560 aa30.53■■■□□ 2.48
HDAC5-207ENST00000588261 ZCCHC6Q5VYS8 1495 aaKnown RBP30.5■■■□□ 2.47
HDAC5-207ENST00000588261 DCAF1Q9Y4B6 1507 aa30.32■■■□□ 2.44
HDAC5-207ENST00000588261 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
HDAC5-207ENST00000588261 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
HDAC5-207ENST00000588261 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
HDAC5-207ENST00000588261 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
HDAC5-207ENST00000588261 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
HDAC5-207ENST00000588261 NCAPD3P42695 1498 aa28.75■■■□□ 2.19
HDAC5-207ENST00000588261 DNAJC5Q9H3Z4 198 aa28.72■■■□□ 2.19
HDAC5-207ENST00000588261 ATAD2BQ9ULI0 1458 aa28.69■■■□□ 2.18
HDAC5-207ENST00000588261 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
HDAC5-207ENST00000588261 SMARCA2P51531 1590 aa28.51■■■□□ 2.15
HDAC5-207ENST00000588261 HMGXB3Q12766 1538 aa28.51■■■□□ 2.15
HDAC5-207ENST00000588261 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.15
HDAC5-207ENST00000588261 CUX2O14529 1486 aa28.41■■■□□ 2.14
HDAC5-207ENST00000588261 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
HDAC5-207ENST00000588261 MROH2BQ7Z745 1585 aa28.37■■■□□ 2.13
HDAC5-207ENST00000588261 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
HDAC5-207ENST00000588261 NESP48681 1621 aa28.36■■■□□ 2.13
HDAC5-207ENST00000588261 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
HDAC5-207ENST00000588261 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
HDAC5-207ENST00000588261 LAMC3Q9Y6N6 1575 aa28.03■■■□□ 2.08
HDAC5-207ENST00000588261 WIZO95785 1651 aa28■■■□□ 2.07
HDAC5-207ENST00000588261 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
HDAC5-207ENST00000588261 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
HDAC5-207ENST00000588261 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
HDAC5-207ENST00000588261 RSF1Q96T23 1441 aaPredicted RBP27.78■■■□□ 2.04
HDAC5-207ENST00000588261 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
HDAC5-207ENST00000588261 WDR62O43379 1518 aa27.62■■■□□ 2.01
HDAC5-207ENST00000588261 TOP2AP11388 1531 aaKnown RBP27.62■■■□□ 2.01
HDAC5-207ENST00000588261 CFTRP13569 1480 aa27.57■■■□□ 2
HDAC5-207ENST00000588261 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
HDAC5-207ENST00000588261 CEP164Q9UPV0 1460 aa27.52■■■□□ 2
HDAC5-207ENST00000588261 URB2Q14146 1524 aaKnown RBP27.38■■□□□ 1.97
HDAC5-207ENST00000588261 CCDC88BA6NC98 1476 aa27.33■■□□□ 1.97
HDAC5-207ENST00000588261 TRIM41Q8WV44 630 aa27.32■■□□□ 1.96
HDAC5-207ENST00000588261 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
HDAC5-207ENST00000588261 OSCARQ8IYS5 282 aa27.1■■□□□ 1.93
HDAC5-207ENST00000588261 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
HDAC5-207ENST00000588261 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
HDAC5-207ENST00000588261 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
HDAC5-207ENST00000588261 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
HDAC5-207ENST00000588261 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
HDAC5-207ENST00000588261 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
HDAC5-207ENST00000588261 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
HDAC5-207ENST00000588261 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
HDAC5-207ENST00000588261 AQRO60306 1485 aaKnown RBP eCLIP26.77■■□□□ 1.882e-6■■■■■ 41.6
HDAC5-207ENST00000588261 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
HDAC5-207ENST00000588261 RIMBP3CA6NJZ7 1639 aa26.72■■□□□ 1.87
HDAC5-207ENST00000588261 RIMBP3BA6NNM3 1639 aa26.72■■□□□ 1.87
HDAC5-207ENST00000588261 RIMBP3Q9UFD9 1639 aa26.72■■□□□ 1.87
HDAC5-207ENST00000588261 CUX1P39880 1505 aa26.64■■□□□ 1.85
HDAC5-207ENST00000588261 ARHGEF11O15085 1522 aa26.63■■□□□ 1.85
HDAC5-207ENST00000588261 CHD1O14646 1710 aa26.62■■□□□ 1.85
HDAC5-207ENST00000588261 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
HDAC5-207ENST00000588261 SOGA1O94964 1423 aa26.61■■□□□ 1.85
HDAC5-207ENST00000588261 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
HDAC5-207ENST00000588261 SUPT5HO00267 1087 aaKnown RBP26.48■■□□□ 1.83
HDAC5-207ENST00000588261 SNAPC4Q5SXM2 1469 aa26.48■■□□□ 1.83
HDAC5-207ENST00000588261 FBLN2P98095 1184 aa26.46■■□□□ 1.83
HDAC5-207ENST00000588261 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
HDAC5-207ENST00000588261 CYB5RLQ6IPT4 315 aa26.44■■□□□ 1.82
HDAC5-207ENST00000588261 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
HDAC5-207ENST00000588261 CLASP1Q7Z460 1538 aa26.37■■□□□ 1.81
HDAC5-207ENST00000588261 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
HDAC5-207ENST00000588261 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
HDAC5-207ENST00000588261 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
HDAC5-207ENST00000588261 SYNJ2O15056 1496 aa26.29■■□□□ 1.8
HDAC5-207ENST00000588261 GAPVD1Q14C86 1478 aa26.29■■□□□ 1.8
HDAC5-207ENST00000588261 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
HDAC5-207ENST00000588261 TRHP20396 242 aaPredicted RBP26.28■■□□□ 1.8
HDAC5-207ENST00000588261 PBRM1Q86U86 1689 aa26.27■■□□□ 1.8
HDAC5-207ENST00000588261 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
HDAC5-207ENST00000588261 SYNJ1O43426 1573 aa26.23■■□□□ 1.79
HDAC5-207ENST00000588261 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
HDAC5-207ENST00000588261 TOP2BQ02880 1626 aa26.16■■□□□ 1.78
HDAC5-207ENST00000588261 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
HDAC5-207ENST00000588261 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
HDAC5-207ENST00000588261 GRIN2AQ12879 1464 aa26.06■■□□□ 1.76
HDAC5-207ENST00000588261 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
HDAC5-207ENST00000588261 CEP170Q5SW79 1584 aa26.02■■□□□ 1.76
HDAC5-207ENST00000588261 NUP160Q12769 1436 aa26.01■■□□□ 1.75
HDAC5-207ENST00000588261 FHAD1B1AJZ9 1412 aa25.95■■□□□ 1.74
HDAC5-207ENST00000588261 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
HDAC5-207ENST00000588261 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
HDAC5-207ENST00000588261 AEBP2Q6ZN18 517 aaPredicted RBP25.78■■□□□ 1.72
HDAC5-207ENST00000588261 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
HDAC5-207ENST00000588261 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
HDAC5-207ENST00000588261 IGF1RP08069 1367 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 313.5 ms