RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 POLR1AO95602 1720 aaPredicted RBP26.89■■□□□ 1.9
SF3A2-203ENST00000587637 PZPP20742 1482 aa26.87■■□□□ 1.89
SF3A2-203ENST00000587637 FBXO31Q5XUX0 539 aaPredicted RBP26.87■■□□□ 1.89
SF3A2-203ENST00000587637 NEURL4Q96JN8 1562 aa26.87■■□□□ 1.89
SF3A2-203ENST00000587637 KANK4Q5T7N3 995 aaPredicted RBP26.86■■□□□ 1.89
SF3A2-203ENST00000587637 RNF17Q9BXT8 1623 aaKnown RBP26.85■■□□□ 1.89
SF3A2-203ENST00000587637 TNRQ92752 1358 aa26.84■■□□□ 1.89
SF3A2-203ENST00000587637 MAST1Q9Y2H9 1570 aa26.84■■□□□ 1.89
SF3A2-203ENST00000587637 IQSEC2Q5JU85 1478 aa26.83■■□□□ 1.89
SF3A2-203ENST00000587637 FAM135AQ9P2D6 1515 aa26.82■■□□□ 1.88
SF3A2-203ENST00000587637 MROH1Q8NDA8 1641 aa26.82■■□□□ 1.88
SF3A2-203ENST00000587637 CEP152O94986 1710 aa26.82■■□□□ 1.88
SF3A2-203ENST00000587637 PPP6R1Q9UPN7 881 aa26.81■■□□□ 1.88
SF3A2-203ENST00000587637 SPATA31D1Q6ZQQ2 1576 aa26.8■■□□□ 1.88
SF3A2-203ENST00000587637 ABCC3O15438 1527 aa26.79■■□□□ 1.88
SF3A2-203ENST00000587637 MYOM3Q5VTT5 1437 aa26.77■■□□□ 1.88
SF3A2-203ENST00000587637 PKD2Q13563 968 aa26.77■■□□□ 1.88
SF3A2-203ENST00000587637 CROCC2H7BZ55 1655 aa26.76■■□□□ 1.87
SF3A2-203ENST00000587637 DISP3Q9P2K9 1392 aa26.76■■□□□ 1.87
SF3A2-203ENST00000587637 ZC3H13Q5T200 1668 aaKnown RBP26.76■■□□□ 1.87
SF3A2-203ENST00000587637 EIF2AK4Q9P2K8 1649 aaKnown RBP26.76■■□□□ 1.87
SF3A2-203ENST00000587637 MAP3K1Q13233 1512 aa26.75■■□□□ 1.87
SF3A2-203ENST00000587637 WASHC2CQ9Y4E1 1318 aa26.75■■□□□ 1.87
SF3A2-203ENST00000587637 CFAP65Q6ZU64 1925 aaKnown RBP26.72■■□□□ 1.87
SF3A2-203ENST00000587637 TSPY4P0CV99 314 aa26.71■■□□□ 1.87
SF3A2-203ENST00000587637 TSPY10P0CW01 314 aa26.71■■□□□ 1.87
SF3A2-203ENST00000587637 RSPH4AQ5TD94 716 aa26.71■■□□□ 1.87
SF3A2-203ENST00000587637 ILDR2Q71H61 639 aa26.71■■□□□ 1.87
SF3A2-203ENST00000587637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.71■■□□□ 1.878e-9■■■□□ 15.4
SF3A2-203ENST00000587637 UGGT1Q9NYU2 1555 aa26.7■■□□□ 1.86
SF3A2-203ENST00000587637 MIA2Q96PC5 1412 aa26.69■■□□□ 1.86
SF3A2-203ENST00000587637 PTPN23Q9H3S7 1636 aa26.68■■□□□ 1.86
SF3A2-203ENST00000587637 ERVK-7P63135 1459 aa26.68■■□□□ 1.86
SF3A2-203ENST00000587637 NLRP1Q9C000 1473 aa26.68■■□□□ 1.86
SF3A2-203ENST00000587637 VWDEQ8N2E2 1590 aa26.67■■□□□ 1.86
SF3A2-203ENST00000587637 UBAP1LF5GYI3 381 aa26.66■■□□□ 1.86
SF3A2-203ENST00000587637 IQGAP1P46940 1657 aa26.64■■□□□ 1.86
SF3A2-203ENST00000587637 DUOX2Q9NRD8 1548 aa26.64■■□□□ 1.85
SF3A2-203ENST00000587637 DEPDC5O75140 1603 aa26.63■■□□□ 1.85
SF3A2-203ENST00000587637 STRCP1A6NGW2 1772 aa26.63■■□□□ 1.85
SF3A2-203ENST00000587637 ABCC5O15440 1437 aa26.63■■□□□ 1.85
SF3A2-203ENST00000587637 PRDM15P57071 1507 aaPredicted RBP26.62■■□□□ 1.85
SF3A2-203ENST00000587637 UBR1Q8IWV7 1749 aa26.61■■□□□ 1.85
SF3A2-203ENST00000587637 SHANK2Q9UPX8 1470 aa26.61■■□□□ 1.85
SF3A2-203ENST00000587637 NPHP4O75161 1426 aaPredicted RBP26.6■■□□□ 1.85
SF3A2-203ENST00000587637 KIF15Q9NS87 1388 aa26.59■■□□□ 1.85
SF3A2-203ENST00000587637 CPS1P31327 1500 aa26.59■■□□□ 1.85
SF3A2-203ENST00000587637 DAPK1P53355 1430 aa26.56■■□□□ 1.84
SF3A2-203ENST00000587637 MED14O60244 1454 aa26.56■■□□□ 1.84
SF3A2-203ENST00000587637 ALKQ9UM73 1620 aa26.56■■□□□ 1.84
SF3A2-203ENST00000587637 FGD6Q6ZV73 1430 aa26.55■■□□□ 1.84
SF3A2-203ENST00000587637 ANKLE2Q86XL3 938 aa26.54■■□□□ 1.84
SF3A2-203ENST00000587637 ERBINQ96RT1 1412 aa26.52■■□□□ 1.84
SF3A2-203ENST00000587637 RRP7BPQ9NSQ0 103 aa26.52■■□□□ 1.84
SF3A2-203ENST00000587637 SCAF1Q9H7N4 1312 aaKnown RBP26.51■■□□□ 1.83
SF3A2-203ENST00000587637 THEMISQ8N1K5 641 aaPredicted RBP26.51■■□□□ 1.83
SF3A2-203ENST00000587637 PIK3C2BO00750 1634 aa26.5■■□□□ 1.83
SF3A2-203ENST00000587637 PIP4K2BP78356 416 aa26.49■■□□□ 1.83
SF3A2-203ENST00000587637 SCAF11Q99590 1463 aaKnown RBP26.45■■□□□ 1.82
SF3A2-203ENST00000587637 HSPA1LP34931 641 aa26.45■■□□□ 1.82
SF3A2-203ENST00000587637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.45■■□□□ 1.82
SF3A2-203ENST00000587637 CHIC2Q9UKJ5 165 aa26.45■■□□□ 1.82
SF3A2-203ENST00000587637 SYNMO15061 1565 aa26.45■■□□□ 1.82
SF3A2-203ENST00000587637 MED1Q15648 1581 aaPredicted RBP26.43■■□□□ 1.82
SF3A2-203ENST00000587637 LRRC7Q96NW7 1537 aa26.43■■□□□ 1.82
SF3A2-203ENST00000587637 ARHGAP23Q9P227 1491 aa26.42■■□□□ 1.82
SF3A2-203ENST00000587637 ARHGAP31Q2M1Z3 1444 aa26.42■■□□□ 1.82
SF3A2-203ENST00000587637 APLP2Q06481 763 aa26.42■■□□□ 1.82
SF3A2-203ENST00000587637 SLIT1O75093 1534 aa26.41■■□□□ 1.82
SF3A2-203ENST00000587637 XIRP1Q702N8 1843 aaKnown RBP26.39■■□□□ 1.82
SF3A2-203ENST00000587637 SOCS7O14512 581 aa26.38■■□□□ 1.81
SF3A2-203ENST00000587637 LTKP29376 864 aa26.38■■□□□ 1.81
SF3A2-203ENST00000587637 SENP3Q9H4L4 574 aaPredicted RBP26.37■■□□□ 1.81
SF3A2-203ENST00000587637 EFCAB6Q5THR3 1501 aa26.37■■□□□ 1.81
SF3A2-203ENST00000587637 LMTK2Q8IWU2 1503 aa26.37■■□□□ 1.81
SF3A2-203ENST00000587637 ANKRD30AQ9BXX3 1397 aa26.35■■□□□ 1.81
SF3A2-203ENST00000587637 ADGRL2O95490 1459 aa26.35■■□□□ 1.81
SF3A2-203ENST00000587637 TOM1O60784 492 aa26.34■■□□□ 1.81
SF3A2-203ENST00000587637 KANK1Q14678 1352 aa26.32■■□□□ 1.8
SF3A2-203ENST00000587637 MYO5BQ9ULV0 1848 aa26.31■■□□□ 1.8
SF3A2-203ENST00000587637 ADGRB3O60242 1522 aa26.3■■□□□ 1.8
SF3A2-203ENST00000587637 TXNDC2Q86VQ3 553 aa26.3■■□□□ 1.8
SF3A2-203ENST00000587637 KDM5AP29375 1690 aaKnown RBP26.28■■□□□ 1.8
SF3A2-203ENST00000587637 FAM50AQ14320 339 aaKnown RBP26.28■■□□□ 1.8
SF3A2-203ENST00000587637 TMEM2Q9UHN6 1383 aa26.28■■□□□ 1.8
SF3A2-203ENST00000587637 NOS1P29475 1434 aa26.27■■□□□ 1.8
SF3A2-203ENST00000587637 GCC2Q8IWJ2 1684 aa26.25■■□□□ 1.79
SF3A2-203ENST00000587637 IDI1Q13907 227 aa26.24■■□□□ 1.79
SF3A2-203ENST00000587637 TET3O43151 1660 aa26.22■■□□□ 1.79
SF3A2-203ENST00000587637 ANKRD50Q9ULJ7 1429 aa26.22■■□□□ 1.79
SF3A2-203ENST00000587637 UNC13BO14795 1591 aa26.21■■□□□ 1.79
SF3A2-203ENST00000587637 STAG3Q9UJ98 1225 aa26.21■■□□□ 1.79
SF3A2-203ENST00000587637 EID1Q9Y6B2 187 aa26.18■■□□□ 1.78
SF3A2-203ENST00000587637 NWD1Q149M9 1564 aa26.16■■□□□ 1.78
SF3A2-203ENST00000587637 E9PCH4 1651 aa26.15■■□□□ 1.78
SF3A2-203ENST00000587637 RBM33Q96EV2 1170 aaKnown RBP26.15■■□□□ 1.78
SF3A2-203ENST00000587637 SLC26A8Q96RN1 970 aa26.14■■□□□ 1.78
SF3A2-203ENST00000587637 TMEM94Q12767 1356 aa26.13■■□□□ 1.77
SF3A2-203ENST00000587637 TMEM131LA2VDJ0 1609 aa26.13■■□□□ 1.77
SF3A2-203ENST00000587637 RPRD2Q5VT52 1461 aaKnown RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms