RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 NISCHQ9Y2I1 1504 aa42.58■■■■■ 4.41
SF3A2-203ENST00000587637 ABCC9O60706 1549 aa38.36■■■■□ 3.73
SF3A2-203ENST00000587637 CCDC180Q9P1Z9 1646 aa38.27■■■■□ 3.72
SF3A2-203ENST00000587637 RB1CC1Q8TDY2 1594 aa36.38■■■■□ 3.41
SF3A2-203ENST00000587637 NACADO15069 1562 aa36.09■■■■□ 3.37
SF3A2-203ENST00000587637 DNAJC5BQ9UF47 199 aa35.97■■■■□ 3.35
SF3A2-203ENST00000587637 DCAF8L2P0C7V8 631 aa35.88■■■■□ 3.33
SF3A2-203ENST00000587637 UNC13AQ9UPW8 1703 aa35.8■■■■□ 3.32
SF3A2-203ENST00000587637 PABPN1Q86U42 306 aaKnown RBP eCLIP35.65■■■■□ 3.3
SF3A2-203ENST00000587637 MYO15BQ96JP2 1530 aa35.5■■■■□ 3.27
SF3A2-203ENST00000587637 BICRAQ9NZM4 1560 aa35.46■■■■□ 3.27
SF3A2-203ENST00000587637 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
SF3A2-203ENST00000587637 DCAF1Q9Y4B6 1507 aa35.08■■■■□ 3.21
SF3A2-203ENST00000587637 SCRIBQ14160 1630 aa35.01■■■■□ 3.19
SF3A2-203ENST00000587637 SHROOM4Q9ULL8 1493 aa34.74■■■■□ 3.15
SF3A2-203ENST00000587637 CC2D2AQ9P2K1 1620 aa34.65■■■■□ 3.14
SF3A2-203ENST00000587637 EIF4G1Q04637 1599 aaKnown RBP34.54■■■■□ 3.12
SF3A2-203ENST00000587637 CECR2Q9BXF3 1484 aa34.48■■■■□ 3.11
SF3A2-203ENST00000587637 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
SF3A2-203ENST00000587637 NCAPD3P42695 1498 aa33.28■■■□□ 2.92
SF3A2-203ENST00000587637 ATAD2BQ9ULI0 1458 aa33.27■■■□□ 2.92
SF3A2-203ENST00000587637 SMARCA2P51531 1590 aa33.13■■■□□ 2.89
SF3A2-203ENST00000587637 HMGXB3Q12766 1538 aa33.12■■■□□ 2.89
SF3A2-203ENST00000587637 BAZ1AQ9NRL2 1556 aaPredicted RBP33.04■■■□□ 2.88
SF3A2-203ENST00000587637 ERCC6Q03468 1493 aa33.03■■■□□ 2.88
SF3A2-203ENST00000587637 NESP48681 1621 aa32.99■■■□□ 2.87
SF3A2-203ENST00000587637 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
SF3A2-203ENST00000587637 CUX2O14529 1486 aa32.93■■■□□ 2.86
SF3A2-203ENST00000587637 MROH2BQ7Z745 1585 aa32.91■■■□□ 2.86
SF3A2-203ENST00000587637 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
SF3A2-203ENST00000587637 DNAJC5Q9H3Z4 198 aa32.86■■■□□ 2.85
SF3A2-203ENST00000587637 THOC2Q8NI27 1593 aaKnown RBP32.68■■■□□ 2.82
SF3A2-203ENST00000587637 KIF21AQ7Z4S6 1674 aa32.61■■■□□ 2.81
SF3A2-203ENST00000587637 LAMC3Q9Y6N6 1575 aa32.6■■■□□ 2.81
SF3A2-203ENST00000587637 WIZO95785 1651 aa32.56■■■□□ 2.8
SF3A2-203ENST00000587637 PDS5BQ9NTI5 1447 aa32.32■■■□□ 2.76
SF3A2-203ENST00000587637 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
SF3A2-203ENST00000587637 MRC2Q9UBG0 1479 aa32.17■■■□□ 2.74
SF3A2-203ENST00000587637 WDR62O43379 1518 aa32.13■■■□□ 2.73
SF3A2-203ENST00000587637 RSF1Q96T23 1441 aaPredicted RBP32.12■■■□□ 2.73
SF3A2-203ENST00000587637 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
SF3A2-203ENST00000587637 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
SF3A2-203ENST00000587637 FANCD2Q9BXW9 1451 aa32■■■□□ 2.71
SF3A2-203ENST00000587637 CFTRP13569 1480 aa31.94■■■□□ 2.7
SF3A2-203ENST00000587637 URB2Q14146 1524 aaKnown RBP31.81■■■□□ 2.68
SF3A2-203ENST00000587637 PRDM2Q13029 1718 aa31.79■■■□□ 2.68
SF3A2-203ENST00000587637 CCDC88BA6NC98 1476 aa31.66■■■□□ 2.66
SF3A2-203ENST00000587637 TRIM41Q8WV44 630 aa31.56■■■□□ 2.64
SF3A2-203ENST00000587637 ZNF608Q9ULD9 1512 aaPredicted RBP31.44■■■□□ 2.62
SF3A2-203ENST00000587637 TOPBP1Q92547 1522 aa31.43■■■□□ 2.62
SF3A2-203ENST00000587637 IFT140Q96RY7 1462 aa31.34■■■□□ 2.61
SF3A2-203ENST00000587637 DNMBPQ6XZF7 1577 aa31.3■■■□□ 2.6
SF3A2-203ENST00000587637 EIF4G3O43432 1585 aaKnown RBP31.3■■■□□ 2.6
SF3A2-203ENST00000587637 OSCARQ8IYS5 282 aa31.29■■■□□ 2.6
SF3A2-203ENST00000587637 RIMBP3CA6NJZ7 1639 aa31.18■■■□□ 2.58
SF3A2-203ENST00000587637 RIMBP3BA6NNM3 1639 aa31.18■■■□□ 2.58
SF3A2-203ENST00000587637 TARBP1Q13395 1621 aaKnown RBP31.18■■■□□ 2.58
SF3A2-203ENST00000587637 RIMBP3Q9UFD9 1639 aa31.18■■■□□ 2.58
SF3A2-203ENST00000587637 ABCC8Q09428 1581 aa31.14■■■□□ 2.58
SF3A2-203ENST00000587637 CHD1O14646 1710 aa31.12■■■□□ 2.57
SF3A2-203ENST00000587637 POLA1P09884 1462 aaPredicted RBP31.1■■■□□ 2.57
SF3A2-203ENST00000587637 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.572e-8■■■■■ 33.4
SF3A2-203ENST00000587637 RAD54L2Q9Y4B4 1467 aa31.03■■■□□ 2.56
SF3A2-203ENST00000587637 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
SF3A2-203ENST00000587637 CUX1P39880 1505 aa30.93■■■□□ 2.54
SF3A2-203ENST00000587637 FGD5Q6ZNL6 1462 aa30.92■■■□□ 2.54
SF3A2-203ENST00000587637 TDRD9Q8NDG6 1382 aaKnown RBP30.86■■■□□ 2.53
SF3A2-203ENST00000587637 SOGA1O94964 1423 aa30.85■■■□□ 2.53
SF3A2-203ENST00000587637 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.53
SF3A2-203ENST00000587637 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
SF3A2-203ENST00000587637 FBLN2P98095 1184 aa30.8■■■□□ 2.52
SF3A2-203ENST00000587637 ARAP1Q96P48 1450 aa30.76■■■□□ 2.51
SF3A2-203ENST00000587637 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
SF3A2-203ENST00000587637 SUPT5HO00267 1087 aaKnown RBP30.67■■■□□ 2.5
SF3A2-203ENST00000587637 CLASP1Q7Z460 1538 aa30.67■■■□□ 2.5
SF3A2-203ENST00000587637 CYB5RLQ6IPT4 315 aa30.66■■■□□ 2.5
SF3A2-203ENST00000587637 MAGI1Q96QZ7 1491 aaPredicted RBP30.62■■■□□ 2.49
SF3A2-203ENST00000587637 GRIN2BQ13224 1484 aa30.61■■■□□ 2.49
SF3A2-203ENST00000587637 ABCA5Q8WWZ7 1642 aa30.57■■■□□ 2.48
SF3A2-203ENST00000587637 SYNJ1O43426 1573 aa30.57■■■□□ 2.48
SF3A2-203ENST00000587637 SYNJ2O15056 1496 aa30.53■■■□□ 2.48
SF3A2-203ENST00000587637 GAPVD1Q14C86 1478 aa30.52■■■□□ 2.48
SF3A2-203ENST00000587637 ABCA10Q8WWZ4 1543 aa30.5■■■□□ 2.47
SF3A2-203ENST00000587637 CHMP7Q8WUX9 453 aaPredicted RBP30.49■■■□□ 2.47
SF3A2-203ENST00000587637 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
SF3A2-203ENST00000587637 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
SF3A2-203ENST00000587637 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
SF3A2-203ENST00000587637 TRHP20396 242 aaPredicted RBP30.32■■■□□ 2.44
SF3A2-203ENST00000587637 ERCC6L2Q5T890 1561 aa30.3■■■□□ 2.44
SF3A2-203ENST00000587637 WRNQ14191 1432 aaPredicted RBP eCLIP30.29■■■□□ 2.449e-7■■■□□ 18.8
SF3A2-203ENST00000587637 GRIN2AQ12879 1464 aa30.27■■■□□ 2.44
SF3A2-203ENST00000587637 CEP170Q5SW79 1584 aa30.27■■■□□ 2.44
SF3A2-203ENST00000587637 NUP160Q12769 1436 aa30.15■■■□□ 2.42
SF3A2-203ENST00000587637 FHAD1B1AJZ9 1412 aa30.1■■■□□ 2.41
SF3A2-203ENST00000587637 SHROOM2Q13796 1616 aa30.09■■■□□ 2.41
SF3A2-203ENST00000587637 ERICH3Q5RHP9 1530 aa30.09■■■□□ 2.41
SF3A2-203ENST00000587637 RUSC2Q8N2Y8 1516 aa29.94■■■□□ 2.38
SF3A2-203ENST00000587637 PRG4Q92954 1404 aaPredicted RBP29.85■■■□□ 2.37
SF3A2-203ENST00000587637 KIF13AQ9H1H9 1805 aa29.78■■■□□ 2.36
SF3A2-203ENST00000587637 JPH4Q96JJ6 628 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms