RNA–Protein interactions for RNA: ENST00000585854.1

CHAF1A-203, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 2

Gene CHAF1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-203ENST00000585854 ZNF335Q9H4Z2 1342 aaPredicted RBP32.29■■■□□ 2.76
CHAF1A-203ENST00000585854 KDM5DQ9BY66 1539 aa32.29■■■□□ 2.76
CHAF1A-203ENST00000585854 A2ML1A8K2U0 1454 aa32.28■■■□□ 2.76
CHAF1A-203ENST00000585854 WASHC2CQ9Y4E1 1318 aa32.27■■■□□ 2.76
CHAF1A-203ENST00000585854 FBXO31Q5XUX0 539 aaPredicted RBP32.27■■■□□ 2.76
CHAF1A-203ENST00000585854 DNMT1P26358 1616 aaKnown RBP32.26■■■□□ 2.76
CHAF1A-203ENST00000585854 TCOF1Q13428 1488 aaKnown RBP32.26■■■□□ 2.75
CHAF1A-203ENST00000585854 IQSEC2Q5JU85 1478 aa32.25■■■□□ 2.75
CHAF1A-203ENST00000585854 TNRQ92752 1358 aa32.25■■■□□ 2.75
CHAF1A-203ENST00000585854 PZPP20742 1482 aa32.23■■■□□ 2.75
CHAF1A-203ENST00000585854 FAM135AQ9P2D6 1515 aa32.21■■■□□ 2.75
CHAF1A-203ENST00000585854 KANK4Q5T7N3 995 aaPredicted RBP32.21■■■□□ 2.75
CHAF1A-203ENST00000585854 POLR1AO95602 1720 aaPredicted RBP32.2■■■□□ 2.74
CHAF1A-203ENST00000585854 DISP3Q9P2K9 1392 aa32.19■■■□□ 2.74
CHAF1A-203ENST00000585854 MAST1Q9Y2H9 1570 aa32.15■■■□□ 2.74
CHAF1A-203ENST00000585854 MAP3K1Q13233 1512 aa32.15■■■□□ 2.74
CHAF1A-203ENST00000585854 UBAP1LF5GYI3 381 aa32.13■■■□□ 2.73
CHAF1A-203ENST00000585854 MYOM3Q5VTT5 1437 aa32.13■■■□□ 2.73
CHAF1A-203ENST00000585854 RNF17Q9BXT8 1623 aaKnown RBP32.11■■■□□ 2.73
CHAF1A-203ENST00000585854 CFAP65Q6ZU64 1925 aaKnown RBP32.1■■■□□ 2.73
CHAF1A-203ENST00000585854 MIA2Q96PC5 1412 aa32.09■■■□□ 2.73
CHAF1A-203ENST00000585854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.08■■■□□ 2.73
CHAF1A-203ENST00000585854 NEURL4Q96JN8 1562 aa32.08■■■□□ 2.73
CHAF1A-203ENST00000585854 ZC3H13Q5T200 1668 aaKnown RBP32.08■■■□□ 2.73
CHAF1A-203ENST00000585854 EIF2AK4Q9P2K8 1649 aaKnown RBP32.08■■■□□ 2.73
CHAF1A-203ENST00000585854 UGGT1Q9NYU2 1555 aa32.07■■■□□ 2.72
CHAF1A-203ENST00000585854 NLRP1Q9C000 1473 aa32.06■■■□□ 2.72
CHAF1A-203ENST00000585854 CEP152O94986 1710 aa32.06■■■□□ 2.72
CHAF1A-203ENST00000585854 ABCC3O15438 1527 aa32.05■■■□□ 2.72
CHAF1A-203ENST00000585854 APLP2Q06481 763 aa32.05■■■□□ 2.72
CHAF1A-203ENST00000585854 ANKLE2Q86XL3 938 aa32.05■■■□□ 2.72
CHAF1A-203ENST00000585854 THEMISQ8N1K5 641 aaPredicted RBP32.05■■■□□ 2.72
CHAF1A-203ENST00000585854 SPATA31D1Q6ZQQ2 1576 aa32.05■■■□□ 2.72
CHAF1A-203ENST00000585854 MROH1Q8NDA8 1641 aa32■■■□□ 2.71
CHAF1A-203ENST00000585854 ILDR2Q71H61 639 aa31.99■■■□□ 2.71
CHAF1A-203ENST00000585854 DUOX2Q9NRD8 1548 aa31.99■■■□□ 2.71
CHAF1A-203ENST00000585854 CROCC2H7BZ55 1655 aa31.98■■■□□ 2.71
CHAF1A-203ENST00000585854 PTPN23Q9H3S7 1636 aa31.97■■■□□ 2.71
CHAF1A-203ENST00000585854 SCAF1Q9H7N4 1312 aaKnown RBP31.97■■■□□ 2.71
CHAF1A-203ENST00000585854 SHANK2Q9UPX8 1470 aa31.97■■■□□ 2.71
CHAF1A-203ENST00000585854 ERVK-7P63135 1459 aa31.96■■■□□ 2.71
CHAF1A-203ENST00000585854 NPHP4O75161 1426 aaPredicted RBP31.95■■■□□ 2.71
CHAF1A-203ENST00000585854 CPS1P31327 1500 aa31.95■■■□□ 2.7
CHAF1A-203ENST00000585854 DEPDC5O75140 1603 aa31.93■■■□□ 2.7
CHAF1A-203ENST00000585854 RRP7BPQ9NSQ0 103 aa31.93■■■□□ 2.7
CHAF1A-203ENST00000585854 KIF15Q9NS87 1388 aa31.93■■■□□ 2.7
CHAF1A-203ENST00000585854 IQGAP1P46940 1657 aa31.92■■■□□ 2.7
CHAF1A-203ENST00000585854 ABCC5O15440 1437 aa31.91■■■□□ 2.7
CHAF1A-203ENST00000585854 PIP4K2BP78356 416 aa31.9■■■□□ 2.7
CHAF1A-203ENST00000585854 VWDEQ8N2E2 1590 aa31.89■■■□□ 2.7
CHAF1A-203ENST00000585854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.88■■■□□ 2.691e-11■■■■■ 36.5
CHAF1A-203ENST00000585854 MED14O60244 1454 aa31.88■■■□□ 2.69
CHAF1A-203ENST00000585854 UBR1Q8IWV7 1749 aa31.86■■■□□ 2.69
CHAF1A-203ENST00000585854 DAPK1P53355 1430 aa31.85■■■□□ 2.69
CHAF1A-203ENST00000585854 TOM1O60784 492 aa31.85■■■□□ 2.69
CHAF1A-203ENST00000585854 ERBINQ96RT1 1412 aa31.84■■■□□ 2.69
CHAF1A-203ENST00000585854 PRDM15P57071 1507 aaPredicted RBP31.84■■■□□ 2.69
CHAF1A-203ENST00000585854 FGD6Q6ZV73 1430 aa31.83■■■□□ 2.69
CHAF1A-203ENST00000585854 CHIC2Q9UKJ5 165 aa31.83■■■□□ 2.69
CHAF1A-203ENST00000585854 STRCP1A6NGW2 1772 aa31.79■■■□□ 2.68
CHAF1A-203ENST00000585854 SOCS7O14512 581 aa31.78■■■□□ 2.68
CHAF1A-203ENST00000585854 HSPA1LP34931 641 aa31.77■■■□□ 2.68
CHAF1A-203ENST00000585854 KANK1Q14678 1352 aa31.77■■■□□ 2.68
CHAF1A-203ENST00000585854 ARHGAP31Q2M1Z3 1444 aa31.75■■■□□ 2.67
CHAF1A-203ENST00000585854 ANKRD30AQ9BXX3 1397 aa31.75■■■□□ 2.67
CHAF1A-203ENST00000585854 SCAF11Q99590 1463 aaKnown RBP31.74■■■□□ 2.67
CHAF1A-203ENST00000585854 TXNDC2Q86VQ3 553 aa31.72■■■□□ 2.67
CHAF1A-203ENST00000585854 PIK3C2BO00750 1634 aa31.71■■■□□ 2.67
CHAF1A-203ENST00000585854 STAG3Q9UJ98 1225 aa31.71■■■□□ 2.67
CHAF1A-203ENST00000585854 LTKP29376 864 aa31.68■■■□□ 2.66
CHAF1A-203ENST00000585854 FAM50AQ14320 339 aaKnown RBP31.68■■■□□ 2.66
CHAF1A-203ENST00000585854 LRRC7Q96NW7 1537 aa31.68■■■□□ 2.66
CHAF1A-203ENST00000585854 SYNMO15061 1565 aa31.68■■■□□ 2.66
CHAF1A-203ENST00000585854 SLIT1O75093 1534 aa31.67■■■□□ 2.66
CHAF1A-203ENST00000585854 SENP3Q9H4L4 574 aaPredicted RBP31.67■■■□□ 2.66
CHAF1A-203ENST00000585854 EID1Q9Y6B2 187 aa31.67■■■□□ 2.66
CHAF1A-203ENST00000585854 ARHGAP23Q9P227 1491 aa31.66■■■□□ 2.66
CHAF1A-203ENST00000585854 ALKQ9UM73 1620 aa31.64■■■□□ 2.66
CHAF1A-203ENST00000585854 MED1Q15648 1581 aaPredicted RBP31.6■■■□□ 2.65
CHAF1A-203ENST00000585854 LMTK2Q8IWU2 1503 aa31.6■■■□□ 2.65
CHAF1A-203ENST00000585854 TMEM2Q9UHN6 1383 aa31.58■■■□□ 2.65
CHAF1A-203ENST00000585854 IDI1Q13907 227 aa31.58■■■□□ 2.65
CHAF1A-203ENST00000585854 EFCAB6Q5THR3 1501 aa31.58■■■□□ 2.65
CHAF1A-203ENST00000585854 ADGRL2O95490 1459 aa31.57■■■□□ 2.64
CHAF1A-203ENST00000585854 KDM5AP29375 1690 aaKnown RBP31.55■■■□□ 2.64
CHAF1A-203ENST00000585854 XIRP1Q702N8 1843 aaKnown RBP31.53■■■□□ 2.64
CHAF1A-203ENST00000585854 ANKRD50Q9ULJ7 1429 aa31.5■■■□□ 2.63
CHAF1A-203ENST00000585854 NOS1P29475 1434 aa31.49■■■□□ 2.63
CHAF1A-203ENST00000585854 ADGRB3O60242 1522 aa31.48■■■□□ 2.63
CHAF1A-203ENST00000585854 BCANQ96GW7 911 aa31.46■■■□□ 2.63
CHAF1A-203ENST00000585854 SLC26A8Q96RN1 970 aa31.46■■■□□ 2.63
CHAF1A-203ENST00000585854 PHF23Q9BUL5 403 aaPredicted RBP31.46■■■□□ 2.63
CHAF1A-203ENST00000585854 MYO5BQ9ULV0 1848 aa31.45■■■□□ 2.62
CHAF1A-203ENST00000585854 SLC52A1Q9NWF4 448 aa31.43■■■□□ 2.62
CHAF1A-203ENST00000585854 TET3O43151 1660 aa31.43■■■□□ 2.62
CHAF1A-203ENST00000585854 RPRD2Q5VT52 1461 aaKnown RBP31.4■■■□□ 2.62
CHAF1A-203ENST00000585854 GCC2Q8IWJ2 1684 aa31.39■■■□□ 2.62
CHAF1A-203ENST00000585854 KCNA6P17658 529 aa31.38■■■□□ 2.61
CHAF1A-203ENST00000585854 TMEM94Q12767 1356 aa31.38■■■□□ 2.61
CHAF1A-203ENST00000585854 PROSER2Q86WR7 435 aaPredicted RBP31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms