RNA–Protein interactions for RNA: ENST00000585854.1

CHAF1A-203, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 2

Gene CHAF1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-203ENST00000585854 NISCHQ9Y2I1 1504 aa50.99■■■■■ 5.75
CHAF1A-203ENST00000585854 ABCC9O60706 1549 aa45.91■■■■■ 4.94
CHAF1A-203ENST00000585854 CCDC180Q9P1Z9 1646 aa45.8■■■■■ 4.92
CHAF1A-203ENST00000585854 RB1CC1Q8TDY2 1594 aa43.63■■■■■ 4.58
CHAF1A-203ENST00000585854 NACADO15069 1562 aa43.28■■■■■ 4.52
CHAF1A-203ENST00000585854 DCAF8L2P0C7V8 631 aa43.25■■■■■ 4.51
CHAF1A-203ENST00000585854 DNAJC5BQ9UF47 199 aa43.02■■■■■ 4.48
CHAF1A-203ENST00000585854 PABPN1Q86U42 306 aaKnown RBP eCLIP42.74■■■■■ 4.43
CHAF1A-203ENST00000585854 UNC13AQ9UPW8 1703 aa42.73■■■■■ 4.43
CHAF1A-203ENST00000585854 MYO15BQ96JP2 1530 aa42.57■■■■■ 4.41
CHAF1A-203ENST00000585854 BICRAQ9NZM4 1560 aa42.32■■■■■ 4.37
CHAF1A-203ENST00000585854 ZCCHC6Q5VYS8 1495 aaKnown RBP42.24■■■■■ 4.35
CHAF1A-203ENST00000585854 DCAF1Q9Y4B6 1507 aa42.05■■■■■ 4.32
CHAF1A-203ENST00000585854 SCRIBQ14160 1630 aa41.83■■■■■ 4.29
CHAF1A-203ENST00000585854 SHROOM4Q9ULL8 1493 aa41.66■■■■■ 4.26
CHAF1A-203ENST00000585854 CC2D2AQ9P2K1 1620 aa41.44■■■■■ 4.22
CHAF1A-203ENST00000585854 EIF4G1Q04637 1599 aaKnown RBP41.32■■■■■ 4.2
CHAF1A-203ENST00000585854 CECR2Q9BXF3 1484 aa41.31■■■■■ 4.2
CHAF1A-203ENST00000585854 NCAPD3P42695 1498 aa39.91■■■■□ 3.98
CHAF1A-203ENST00000585854 ATAD2BQ9ULI0 1458 aa39.83■■■■□ 3.97
CHAF1A-203ENST00000585854 SMARCA4P51532 1647 aa39.83■■■■□ 3.97
CHAF1A-203ENST00000585854 SMARCA2P51531 1590 aa39.74■■■■□ 3.95
CHAF1A-203ENST00000585854 ERCC6Q03468 1493 aa39.65■■■■□ 3.94
CHAF1A-203ENST00000585854 HMGXB3Q12766 1538 aa39.65■■■■□ 3.94
CHAF1A-203ENST00000585854 BAZ1AQ9NRL2 1556 aaPredicted RBP39.61■■■■□ 3.93
CHAF1A-203ENST00000585854 BAZ1BQ9UIG0 1483 aaKnown RBP39.5■■■■□ 3.91
CHAF1A-203ENST00000585854 DNAJC5Q9H3Z4 198 aa39.5■■■■□ 3.91
CHAF1A-203ENST00000585854 CUX2O14529 1486 aa39.49■■■■□ 3.91
CHAF1A-203ENST00000585854 NESP48681 1621 aa39.4■■■■□ 3.9
CHAF1A-203ENST00000585854 PEG3Q9GZU2 1588 aa39.35■■■■□ 3.89
CHAF1A-203ENST00000585854 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
CHAF1A-203ENST00000585854 LAMC3Q9Y6N6 1575 aa39.08■■■■□ 3.85
CHAF1A-203ENST00000585854 THOC2Q8NI27 1593 aaKnown RBP38.99■■■■□ 3.83
CHAF1A-203ENST00000585854 KIF21AQ7Z4S6 1674 aa38.95■■■■□ 3.83
CHAF1A-203ENST00000585854 WIZO95785 1651 aa38.91■■■■□ 3.82
CHAF1A-203ENST00000585854 PDS5BQ9NTI5 1447 aa38.86■■■■□ 3.81
CHAF1A-203ENST00000585854 CADPSQ9ULU8 1353 aa38.74■■■■□ 3.79
CHAF1A-203ENST00000585854 MRC2Q9UBG0 1479 aa38.54■■■■□ 3.76
CHAF1A-203ENST00000585854 RSF1Q96T23 1441 aaPredicted RBP38.46■■■■□ 3.75
CHAF1A-203ENST00000585854 WDR62O43379 1518 aa38.42■■■■□ 3.74
CHAF1A-203ENST00000585854 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
CHAF1A-203ENST00000585854 TOP2AP11388 1531 aaKnown RBP38.36■■■■□ 3.73
CHAF1A-203ENST00000585854 FANCD2Q9BXW9 1451 aa38.35■■■■□ 3.73
CHAF1A-203ENST00000585854 CFTRP13569 1480 aa38.27■■■■□ 3.72
CHAF1A-203ENST00000585854 URB2Q14146 1524 aaKnown RBP38.02■■■■□ 3.68
CHAF1A-203ENST00000585854 PRDM2Q13029 1718 aa38.02■■■■□ 3.68
CHAF1A-203ENST00000585854 TRIM41Q8WV44 630 aa37.93■■■■□ 3.66
CHAF1A-203ENST00000585854 CCDC88BA6NC98 1476 aa37.92■■■■□ 3.66
CHAF1A-203ENST00000585854 OSCARQ8IYS5 282 aa37.72■■■■□ 3.63
CHAF1A-203ENST00000585854 TOPBP1Q92547 1522 aa37.61■■■■□ 3.61
CHAF1A-203ENST00000585854 IFT140Q96RY7 1462 aa37.6■■■■□ 3.61
CHAF1A-203ENST00000585854 ZNF608Q9ULD9 1512 aaPredicted RBP37.57■■■■□ 3.61
CHAF1A-203ENST00000585854 ABCC8Q09428 1581 aa37.5■■■■□ 3.59
CHAF1A-203ENST00000585854 DNMBPQ6XZF7 1577 aa37.47■■■■□ 3.59
CHAF1A-203ENST00000585854 EIF4G3O43432 1585 aaKnown RBP37.39■■■■□ 3.58
CHAF1A-203ENST00000585854 RIMBP3CA6NJZ7 1639 aa37.28■■■■□ 3.56
CHAF1A-203ENST00000585854 RIMBP3BA6NNM3 1639 aa37.28■■■■□ 3.56
CHAF1A-203ENST00000585854 RIMBP3Q9UFD9 1639 aa37.28■■■■□ 3.56
CHAF1A-203ENST00000585854 TARBP1Q13395 1621 aaKnown RBP37.26■■■■□ 3.56
CHAF1A-203ENST00000585854 AQRO60306 1485 aaKnown RBP eCLIP37.24■■■■□ 3.559e-7■■■■■ 48.6
CHAF1A-203ENST00000585854 POLA1P09884 1462 aaPredicted RBP37.21■■■■□ 3.55
CHAF1A-203ENST00000585854 CHD1O14646 1710 aa37.19■■■■□ 3.54
CHAF1A-203ENST00000585854 ARHGEF11O15085 1522 aa37.12■■■■□ 3.53
CHAF1A-203ENST00000585854 RAD54L2Q9Y4B4 1467 aa37.12■■■■□ 3.53
CHAF1A-203ENST00000585854 FBLN2P98095 1184 aa37.1■■■■□ 3.53
CHAF1A-203ENST00000585854 SOGA1O94964 1423 aa37.06■■■■□ 3.52
CHAF1A-203ENST00000585854 TDRD9Q8NDG6 1382 aaKnown RBP37.02■■■■□ 3.52
CHAF1A-203ENST00000585854 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.51
CHAF1A-203ENST00000585854 CUX1P39880 1505 aa36.95■■■■□ 3.51
CHAF1A-203ENST00000585854 SUPT5HO00267 1087 aaKnown RBP36.9■■■■□ 3.5
CHAF1A-203ENST00000585854 CYB5RLQ6IPT4 315 aa36.9■■■■□ 3.5
CHAF1A-203ENST00000585854 SNAPC4Q5SXM2 1469 aa36.87■■■■□ 3.49
CHAF1A-203ENST00000585854 WDR97A6NE52 1622 aa36.84■■■■□ 3.49
CHAF1A-203ENST00000585854 CHMP7Q8WUX9 453 aaPredicted RBP36.75■■■■□ 3.47
CHAF1A-203ENST00000585854 ARAP1Q96P48 1450 aa36.75■■■■□ 3.47
CHAF1A-203ENST00000585854 GRIN2BQ13224 1484 aa36.73■■■■□ 3.47
CHAF1A-203ENST00000585854 MAGI1Q96QZ7 1491 aaPredicted RBP36.72■■■■□ 3.47
CHAF1A-203ENST00000585854 PBRM1Q86U86 1689 aa36.67■■■■□ 3.46
CHAF1A-203ENST00000585854 SYNJ1O43426 1573 aa36.66■■■■□ 3.46
CHAF1A-203ENST00000585854 CLASP1Q7Z460 1538 aa36.64■■■■□ 3.46
CHAF1A-203ENST00000585854 GAPVD1Q14C86 1478 aa36.62■■■■□ 3.45
CHAF1A-203ENST00000585854 SYNJ2O15056 1496 aa36.6■■■■□ 3.45
CHAF1A-203ENST00000585854 TRHP20396 242 aaPredicted RBP36.56■■■■□ 3.44
CHAF1A-203ENST00000585854 ABCA10Q8WWZ4 1543 aa36.53■■■■□ 3.44
CHAF1A-203ENST00000585854 ABCA5Q8WWZ7 1642 aa36.51■■■■□ 3.43
CHAF1A-203ENST00000585854 WRNQ14191 1432 aaPredicted RBP eCLIP36.4■■■■□ 3.42
CHAF1A-203ENST00000585854 BIVM-ERCC5R4GMW8 1640 aa36.37■■■■□ 3.41
CHAF1A-203ENST00000585854 TOP2BQ02880 1626 aa36.34■■■■□ 3.41
CHAF1A-203ENST00000585854 GRIN2AQ12879 1464 aa36.26■■■■□ 3.4
CHAF1A-203ENST00000585854 ADAMTS12P58397 1594 aa36.26■■■■□ 3.39
CHAF1A-203ENST00000585854 CEP170Q5SW79 1584 aa36.15■■■■□ 3.38
CHAF1A-203ENST00000585854 ERCC6L2Q5T890 1561 aa36.12■■■■□ 3.37
CHAF1A-203ENST00000585854 FHAD1B1AJZ9 1412 aa36.12■■■■□ 3.37
CHAF1A-203ENST00000585854 NUP160Q12769 1436 aa36.09■■■■□ 3.37
CHAF1A-203ENST00000585854 ERICH3Q5RHP9 1530 aa36.08■■■■□ 3.37
CHAF1A-203ENST00000585854 SHROOM2Q13796 1616 aa35.97■■■■□ 3.35
CHAF1A-203ENST00000585854 PRG4Q92954 1404 aaPredicted RBP35.82■■■■□ 3.32
CHAF1A-203ENST00000585854 JPH4Q96JJ6 628 aa35.79■■■■□ 3.32
CHAF1A-203ENST00000585854 RUSC2Q8N2Y8 1516 aa35.74■■■■□ 3.31
CHAF1A-203ENST00000585854 KIF27Q86VH2 1401 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms