RNA–Protein interactions for RNA: ENST00000585375.1

GHDC-204, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-204ENST00000585375 NCOA1Q15788 1441 aa25.14■■□□□ 1.62
GHDC-204ENST00000585375 EIF2AK4Q9P2K8 1649 aaKnown RBP25.12■■□□□ 1.61
GHDC-204ENST00000585375 CEP170BQ9Y4F5 1589 aaPredicted RBP25.1■■□□□ 1.61
GHDC-204ENST00000585375 CAMSAP1Q5T5Y3 1602 aa25.1■■□□□ 1.61
GHDC-204ENST00000585375 RNF17Q9BXT8 1623 aaKnown RBP25.1■■□□□ 1.61
GHDC-204ENST00000585375 SHANK2Q9UPX8 1470 aa25.09■■□□□ 1.61
GHDC-204ENST00000585375 PTPN23Q9H3S7 1636 aa25.09■■□□□ 1.61
GHDC-204ENST00000585375 PZPP20742 1482 aa25.09■■□□□ 1.61
GHDC-204ENST00000585375 CERKQ8TCT0 537 aa25.08■■□□□ 1.61
GHDC-204ENST00000585375 PLA2R1Q13018 1463 aa25.08■■□□□ 1.6
GHDC-204ENST00000585375 WASHC2CQ9Y4E1 1318 aa25.07■■□□□ 1.6
GHDC-204ENST00000585375 TCOF1Q13428 1488 aaKnown RBP25.06■■□□□ 1.6
GHDC-204ENST00000585375 CROCC2H7BZ55 1655 aa25.06■■□□□ 1.6
GHDC-204ENST00000585375 FGD6Q6ZV73 1430 aa25.05■■□□□ 1.6
GHDC-204ENST00000585375 ZC3H13Q5T200 1668 aaKnown RBP25.05■■□□□ 1.6
GHDC-204ENST00000585375 DUOX2Q9NRD8 1548 aa25.05■■□□□ 1.6
GHDC-204ENST00000585375 A2ML1A8K2U0 1454 aa25.04■■□□□ 1.6
GHDC-204ENST00000585375 ABCC5O15440 1437 aa25.03■■□□□ 1.6
GHDC-204ENST00000585375 DNMT1P26358 1616 aaKnown RBP25.02■■□□□ 1.6
GHDC-204ENST00000585375 TNRQ92752 1358 aa25.01■■□□□ 1.59
GHDC-204ENST00000585375 PKD2Q13563 968 aa25■■□□□ 1.59
GHDC-204ENST00000585375 DAPK1P53355 1430 aa25■■□□□ 1.59
GHDC-204ENST00000585375 ABCC3O15438 1527 aa24.99■■□□□ 1.59
GHDC-204ENST00000585375 MROH1Q8NDA8 1641 aa24.98■■□□□ 1.59
GHDC-204ENST00000585375 ERBINQ96RT1 1412 aa24.98■■□□□ 1.59
GHDC-204ENST00000585375 KIF15Q9NS87 1388 aa24.98■■□□□ 1.59
GHDC-204ENST00000585375 FBXO31Q5XUX0 539 aaPredicted RBP24.96■■□□□ 1.59
GHDC-204ENST00000585375 NLRP1Q9C000 1473 aa24.96■■□□□ 1.59
GHDC-204ENST00000585375 LTBP4Q8N2S1 1624 aa24.94■■□□□ 1.58
GHDC-204ENST00000585375 PRDM15P57071 1507 aaPredicted RBP24.93■■□□□ 1.58
GHDC-204ENST00000585375 SPATA31D1Q6ZQQ2 1576 aa24.93■■□□□ 1.58
GHDC-204ENST00000585375 NCKAP5LQ9HCH0 1330 aa24.92■■□□□ 1.58
GHDC-204ENST00000585375 ANKRD30AQ9BXX3 1397 aa24.91■■□□□ 1.58
GHDC-204ENST00000585375 IQSEC2Q5JU85 1478 aa24.9■■□□□ 1.58
GHDC-204ENST00000585375 RRP7BPQ9NSQ0 103 aa24.89■■□□□ 1.58
GHDC-204ENST00000585375 DEPDC5O75140 1603 aa24.89■■□□□ 1.57
GHDC-204ENST00000585375 CEP152O94986 1710 aa24.89■■□□□ 1.57
GHDC-204ENST00000585375 POLR1AO95602 1720 aaPredicted RBP24.87■■□□□ 1.57
GHDC-204ENST00000585375 ERVK-7P63135 1459 aa24.87■■□□□ 1.57
GHDC-204ENST00000585375 UGGT1Q9NYU2 1555 aa24.87■■□□□ 1.57
GHDC-204ENST00000585375 ARHGAP31Q2M1Z3 1444 aa24.86■■□□□ 1.57
GHDC-204ENST00000585375 ADGRL2O95490 1459 aa24.86■■□□□ 1.57
GHDC-204ENST00000585375 THEMISQ8N1K5 641 aaPredicted RBP24.85■■□□□ 1.57
GHDC-204ENST00000585375 NEURL4Q96JN8 1562 aa24.82■■□□□ 1.56
GHDC-204ENST00000585375 KANK1Q14678 1352 aa24.81■■□□□ 1.56
GHDC-204ENST00000585375 CHIC2Q9UKJ5 165 aa24.8■■□□□ 1.56
GHDC-204ENST00000585375 ZNF335Q9H4Z2 1342 aaPredicted RBP24.8■■□□□ 1.56
GHDC-204ENST00000585375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.8■■□□□ 1.56
GHDC-204ENST00000585375 ANKLE2Q86XL3 938 aa24.79■■□□□ 1.56
GHDC-204ENST00000585375 LMTK2Q8IWU2 1503 aa24.79■■□□□ 1.56
GHDC-204ENST00000585375 FAM50AQ14320 339 aaKnown RBP24.78■■□□□ 1.56
GHDC-204ENST00000585375 VWDEQ8N2E2 1590 aa24.78■■□□□ 1.56
GHDC-204ENST00000585375 MED14O60244 1454 aa24.77■■□□□ 1.56
GHDC-204ENST00000585375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.74■■□□□ 1.55
GHDC-204ENST00000585375 UBR1Q8IWV7 1749 aa24.73■■□□□ 1.55
GHDC-204ENST00000585375 CFAP65Q6ZU64 1925 aaKnown RBP24.73■■□□□ 1.55
GHDC-204ENST00000585375 NPHP4O75161 1426 aaPredicted RBP24.72■■□□□ 1.55
GHDC-204ENST00000585375 ANKRD50Q9ULJ7 1429 aa24.71■■□□□ 1.55
GHDC-204ENST00000585375 CPS1P31327 1500 aa24.7■■□□□ 1.54
GHDC-204ENST00000585375 IQGAP1P46940 1657 aa24.69■■□□□ 1.54
GHDC-204ENST00000585375 EFCAB6Q5THR3 1501 aa24.68■■□□□ 1.54
GHDC-204ENST00000585375 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
GHDC-204ENST00000585375 SLIT1O75093 1534 aa24.66■■□□□ 1.54
GHDC-204ENST00000585375 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
GHDC-204ENST00000585375 ARHGAP23Q9P227 1491 aa24.66■■□□□ 1.54
GHDC-204ENST00000585375 RPRD2Q5VT52 1461 aaKnown RBP24.64■■□□□ 1.53
GHDC-204ENST00000585375 SCAF11Q99590 1463 aaKnown RBP24.64■■□□□ 1.53
GHDC-204ENST00000585375 NOS1P29475 1434 aa24.63■■□□□ 1.53
GHDC-204ENST00000585375 PIK3C2BO00750 1634 aa24.63■■□□□ 1.53
GHDC-204ENST00000585375 UNC13BO14795 1591 aa24.61■■□□□ 1.53
GHDC-204ENST00000585375 SYNMO15061 1565 aa24.6■■□□□ 1.53
GHDC-204ENST00000585375 TET3O43151 1660 aa24.59■■□□□ 1.53
GHDC-204ENST00000585375 UBAP1LF5GYI3 381 aa24.58■■□□□ 1.53
GHDC-204ENST00000585375 TMEM2Q9UHN6 1383 aa24.57■■□□□ 1.52
GHDC-204ENST00000585375 SLC52A1Q9NWF4 448 aa24.56■■□□□ 1.52
GHDC-204ENST00000585375 EID1Q9Y6B2 187 aa24.56■■□□□ 1.52
GHDC-204ENST00000585375 GCC2Q8IWJ2 1684 aa24.56■■□□□ 1.52
GHDC-204ENST00000585375 IDI1Q13907 227 aa24.55■■□□□ 1.52
GHDC-204ENST00000585375 TXNDC2Q86VQ3 553 aa24.55■■□□□ 1.52
GHDC-204ENST00000585375 STAG3Q9UJ98 1225 aa24.55■■□□□ 1.52
GHDC-204ENST00000585375 LTKP29376 864 aa24.54■■□□□ 1.52
GHDC-204ENST00000585375 ADGRB3O60242 1522 aa24.54■■□□□ 1.52
GHDC-204ENST00000585375 IQGAP3Q86VI3 1631 aa24.51■■□□□ 1.51
GHDC-204ENST00000585375 STRCP1A6NGW2 1772 aa24.49■■□□□ 1.51
GHDC-204ENST00000585375 RRBP1Q9P2E9 1410 aaKnown RBP24.49■■□□□ 1.51
GHDC-204ENST00000585375 TOM1O60784 492 aa24.48■■□□□ 1.51
GHDC-204ENST00000585375 PPARGC1BQ86YN6 1023 aaKnown RBP24.48■■□□□ 1.51
GHDC-204ENST00000585375 LRRC7Q96NW7 1537 aa24.46■■□□□ 1.51
GHDC-204ENST00000585375 ITGAEP38570 1179 aa24.45■■□□□ 1.5
GHDC-204ENST00000585375 E9PCH4 1651 aa24.45■■□□□ 1.5
GHDC-204ENST00000585375 NUP155O75694 1391 aa24.42■■□□□ 1.5
GHDC-204ENST00000585375 TMEM131LA2VDJ0 1609 aa24.41■■□□□ 1.5
GHDC-204ENST00000585375 ZFYVE9O95405 1425 aa24.39■■□□□ 1.5
GHDC-204ENST00000585375 ALKQ9UM73 1620 aa24.39■■□□□ 1.49
GHDC-204ENST00000585375 HDGFP51858 240 aaKnown RBP24.37■■□□□ 1.49
GHDC-204ENST00000585375 MYO5BQ9ULV0 1848 aa24.37■■□□□ 1.49
GHDC-204ENST00000585375 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
GHDC-204ENST00000585375 PIP4K2BP78356 416 aa24.35■■□□□ 1.49
GHDC-204ENST00000585375 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
GHDC-204ENST00000585375 PLEKHG1Q9ULL1 1385 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms